| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 867,937 | C→T | 5.4% | intergenic (+32/+145) | PP_0750 → / ← mqo‑I | hypothetical protein/malate:quinone oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 867,937 | 0 | C | T | 5.4% | 821.5 / 22.9 | 258 | intergenic (+32/+145) | PP_0750/mqo‑I | hypothetical protein/malate:quinone oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base C (113/130); new base T (3/11); total (116/142) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.61e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 266 total aligned reads displayed.
GAAGCTGGCCTGGACCTGGACGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAG > NC_002947/867789‑868086 | gAAGCTGGCCTGGACCTGGACGGCAAGGACGATCACGGCAAGACCTTAGTCGAGCAGAATGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCAGTGGCTGATCTGTAGCCAGTGCCGGCCTAGTAGCGGGCGCG > 1:2271434‑M1/1‑150 (MQ=255)gAAGCTGGCCTGGACCTGGACGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCG > 1:1026132‑M1/1‑150 (MQ=255) tGGCCTGGACCTGGACGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTAGCGGGCGCGCCCcc > 1:7025557‑M1/1‑148 (MQ=255) cctggacctggaCGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCC < 2:6787188‑M1/150‑1 (MQ=255) ctggacctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGACCTCTTCGCGGGCGCGGCCGCGCCC > 1:2092090‑M1/1‑150 (MQ=255) tggacctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCA < 1:6751896‑M1/150‑1 (MQ=255) tggacctggacGACAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCgaaga < 2:3181398‑M1/150‑6 (MQ=255) gacctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCCCA > 2:5951903‑M1/1‑150 (MQ=255) gacctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACc < 2:3310790‑M1/150‑2 (MQ=255) gacctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACA < 1:6758891‑M1/150‑1 (MQ=255) acctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAG < 2:6607035‑M1/150‑1 (MQ=255) acctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAG < 1:1678795‑M1/150‑1 (MQ=255) acctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATCGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCCCAG > 2:5979477‑M1/1‑150 (MQ=255) ctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTATCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGa < 2:5169752/150‑1 (MQ=255) ctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGa < 1:3285301/150‑1 (MQ=255) ctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGa < 1:1525041/150‑1 (MQ=255) ctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGa < 2:247232/150‑1 (MQ=255) tggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCCGTGCCGGCCGCGGCGCGGGCGCGCCCGCGCCCccccgcg > 1:2594389‑M1/1‑143 (MQ=255) ggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGt > 1:1133978/1‑150 (MQ=255) ggCAAGGACGAGCACGGCAAGACCTTCGTCGAGAAGATTGCCGCCCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTcgcg < 1:20552/150‑1 (MQ=255) gCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCgcgc > 2:1825254/1‑150 (MQ=255) cAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCGCCCACCGGAGTCGcgcc > 2:2965446/1‑150 (MQ=255) gAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCAccag > 2:4026930/1‑148 (MQ=255) aGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGc < 2:1134117/150‑1 (MQ=255) cACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCgg < 1:7269691/150‑1 (MQ=255) cGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑c < 2:3629755/150‑1 (MQ=255) ggCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACCGGCGTCGCGCCGCACCGGCGGG‑cc > 1:6714039/1‑149 (MQ=255) cAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCGCTTCGCGGGCGCGCCCCCACCCACAGGGGTAGCCCCGCCCCAGCGGG‑CAtt > 1:1147645/1‑150 (MQ=255) aaGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTa < 2:2058917/150‑1 (MQ=255) aaGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTa < 2:4435615/150‑1 (MQ=255) aGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTAc < 1:1813840/150‑1 (MQ=255) aCCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCCGGCGCGCCCGCTCCCACAGGAGTCGCGCCCCACCAGCGGG‑CCTTAccc > 1:4929381/1‑149 (MQ=255) cTTCGTCGAGCAGAATGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGAGAAAGCCCGAGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCGCCCCCCGGCGTCGCCCCGCACCTGCGGG‑CCGTACCGaa > 2:5549168/1‑150 (MQ=255) ttCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAAc < 2:7392745‑M2/150‑2 (MQ=255) ttCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAAc > 1:1041085‑M2/1‑149 (MQ=255) tcgAGCATATTGCCGACCAGCGCAATGCCCCTGAGTACATCGATATAATCGATAAAGCCCGTGGCTGATATGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGttcggtaatgcccgcaggtgcggcgcgactcctgt < 1:3406238‑M1/150‑36 (MQ=255) tcgAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGTGCCCGCTCCCACAGGttcggtaatgcccgcaggtgcggcgcgactcctgt < 1:6547689‑M1/150‑36 (MQ=255) tcgAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGTGCCCGCTCCCACAGGttcggtaatgcccgcaggtgcggcgcgactcctgt < 1:4438428‑M1/150‑36 (MQ=255) tcgAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGttcggtaatgcccgcaggtgcggcgcgactcctgt < 2:5033303‑M1/150‑36 (MQ=255) tcgAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAAcctgt > 2:6511316‑M2/1‑145 (MQ=255) cgAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGttcggtaatgcccgcaggtgcggcgcgactcctgtg < 2:1082373‑M1/150‑37 (MQ=255) cgAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAAcctgtg > 1:6355249‑M2/1‑144 (MQ=255) gAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCTGTACCGCCCTCTTCGCGGGCATGCCCGCTCCCACAGGttcggtaatgcccgcaggtgcggcgcgactcctgtgg < 1:4118375‑M1/150‑38 (MQ=255) gAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAAcctgtgg > 2:3224737‑M2/1‑143 (MQ=255) gAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAAcctgtgg > 2:5050225‑M2/1‑143 (MQ=255) gAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACACGAGGCGCGCCGCCCCGGCGGG‑CCTTACCGGAccggtgg < 2:6217415‑M2/150‑8 (MQ=255) gCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCTGTACCGCCCTCTTCGCGGGCATGCCCGCTCCCACAGGttcggtaatgcccgcaggtgcggcgcgactcctgtggga < 1:5392895‑M1/150‑40 (MQ=255) gCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGttcggtaatgcccgcaggtgcggcgcgactcctgtggga < 2:4538048‑M1/150‑40 (MQ=255) gCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAAcctgtggga > 2:4321624‑M2/1‑141 (MQ=255) gCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCGCCCACACGAGTCGCGCCGCCCCTGCGGG‑CCTTACCGAAccggggggc < 2:5750160‑M2/150‑10 (MQ=255) cAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCTGTACCGCCCTCTTCGCGGGCATGCCCGCTCCCACAGGttcggtaatgcccgcaggtgcggcgcgactcctgtgggag < 1:4014626‑M1/150‑41 (MQ=255) aGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGttcggtaatgcccgcaggtgcggcgcgactcctgtgggagc < 1:4813698‑M1/150‑42 (MQ=255) aGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAAcctgtgggagc > 1:596208‑M2/1‑139 (MQ=255) gATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAAcctgtgggagcg > 2:3873075‑M2/1‑138 (MQ=255) aTTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTAGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCg > 1:403286/1‑125 (MQ=255) tGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGAGCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCGCCCCCCGGCGTCGCGCCGCCCCAGCGGG‑CCGTACCGCAccggggggcgcgggc < 2:6359706‑M2/150‑16 (MQ=255) ccGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCAt < 1:7427328/150‑1 (MQ=255) cGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCCCACCTGCGGG‑CCTTACCGAACCGGTGGGAGCGGGCATg > 2:4882354/1‑150 (MQ=255) gACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTTCGGG‑CAATACCGAACCTGTGGGCGCGGGCATGc > 2:7202842/1‑150 (MQ=255) gACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGc < 2:1712252/150‑1 (MQ=255) cccAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGcc < 2:1610975/149‑1 (MQ=255) aCCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAAcctgtgggag < 1:683168‑M2/140‑11 (MQ=255) gcAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACCGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGAGCATGCCCGCGaa < 2:3439694/150‑1 (MQ=255) gcAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGaa < 1:5685855/150‑1 (MQ=255) aaTGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCcgctccca < 2:7250947/150‑6 (MQ=255) aaTGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAaga < 1:5490258/150‑1 (MQ=255) ccccTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCCCACCAGCGGG‑CATTACCGAACCTGTGGGAGCGGGCCTGCCCGCGAAGAGGGc > 2:2341926/1‑150 (MQ=255) cccTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATGACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCg < 2:4324845/150‑1 (MQ=255) cccTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGC > 1:4112159‑M1/1‑74 (MQ=255) cccTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGC < 2:4061956‑M1/74‑1 (MQ=255) caCATCGAGCTCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGCCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAgg < 2:4724790/149‑1 (MQ=255) tCGAGATCATCTATAACGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTCCGGGGGCGCGCCCGCCCCCACCGGAGTCGCGCCGCACCGGCGGG‑CATTACCGACCCTGTGGGAGGGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGa < 1:1939280/150‑1 (MQ=255) tCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCGCCCACAGGAGTCGCGCCCCACCCGCGGG‑CCATACCCAACCGGGGGGCGCCGGCCTGCCCCCGCAGGGGGCGGTTCCGGCGGa > 2:3748142/1‑150 (MQ=255) cGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGAt < 2:1338899/150‑1 (MQ=255) agaTCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGCGTCGCGCCGCACCAGCGGG‑CATTACCGCACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCa > 2:4826099/1‑150 (MQ=255) atcatcGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCCCACCTGCGGG‑CATTACCGAACCGGTGGGAGCGGGCCTGCCCGCGAAGAGGGCGGTACAGGCTGATCAAg > 2:6770931/1‑150 (MQ=255) tcatcGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCCCGCCCACAGGAGTCGCGCCCCCCCAGCGGG‑CAGTACCCGACCGGGGGGGGCGGGCCAGCCCGCCGAGAGGGCGGTACAGGCAGATAAAgc > 2:2767444/1‑150 (MQ=255) acatcGATAAAGCCCGGGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAgc < 2:2594389/149‑1 (MQ=255) gATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCCCAGGAGTCGCGCCCCACCTGCGGG‑CCTTACCGCAACGGGGGGAGCGGGCATTCCCGCGCCGGGGGCGGGACCGGCTGATCAAGCGcccg > 2:3357381/1‑148 (MQ=255) aaaGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGca < 2:7274042/150‑1 (MQ=255) ccGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGttcggtaatgcccgcaggtgcggcgcgactcctgt < 2:203589‑M1/92‑36 (MQ=255) gTGGCTTATCGGTAGCCCGGGCCGGCCTCTGCGCGGGCGCGCCCGCCCCCACCGGCGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGAATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACaaaaaa < 1:3150260/150‑1 (MQ=255) ttaTCTGTAGCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCTAACCTGTGGGAGGGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGccc < 1:3519842/148‑1 (MQ=255) tGATCTGTAGCCAGTGCCGGCCTCTTAGCGGGCGCGCCCCCGCCCCCAGGAGTCGCGCCGCACCAGCGGGCCATTACC‑CACCCGGGGGGGGGGGCAATCCCCCGCAGAGGGCGGTGAACGCTGAACAAGCCCCCCGCCCaaaaaaaaccc > 2:5580762/1‑145 (MQ=255) tAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCCCACCCCCACGAGTCGCGCCCCACCGGCCGG‑CCATACCGAAACAGTGGGTGCGGGCAATCCCCCGACGTGGGCGGTACAGGCGGAACAAGCCCCACGCACAAAAAAAACCCCCAgggg > 2:3406895/1‑150 (MQ=255) aGTGCCGGCCTCATCCCGGGCGCCCCCGCTCCCCCACGAGGCGCCCCGCCCCGGCGGG‑CAATCCCGAACCGGTGGGCGCGGGCCAGCCCGCGAAGAGGGCGGTACAGGCGGTTCACCCGCCCGGCCCCAAAAACGCCCCCAGGGGCGtgt > 2:7307091/1‑148 (MQ=255) tGCCGGCCTCTACGCGGGCGCCCCCGCTCCCACCGGAGTCGCGCCGCACCTGCGGG‑AATTACCGAACCTGTGGGTGCGTGAATGCCCTCTAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCTCGGGGCGttttt < 1:604125/150‑1 (MQ=255) gCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCTCGGGGCGtttttt < 2:1026133/150‑2 (MQ=255) ggCCTCGTCGCGGGCGCGCCCGCTCCCCCCGGAGTCGCGCCGCACCGGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGt < 1:5265057/150‑1 (MQ=255) gCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGtt < 2:4790142/150‑1 (MQ=255) ccTCTTCGCGGGCGCGCCCGCTCCCACCGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGttt < 2:4929381/150‑1 (MQ=255) tctTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCCCCTGGGGG‑CATTACCGAACCGGTGGGCGCGGGCATGCCCGCGTAGAGGGCGGTACAGGCTGATCAAGCGCCCGGCCCAAAAAACGCCCCGAGGGGCGTGTTTGCGTTTCa > 2:6914869/1‑150 (MQ=255) tctTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCGGGGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCCCAAAAAACGCCCCGAGGGGCGGTTTTGCGGTTCa > 2:1777114/1‑150 (MQ=255) cgGGCGCGCCCGCTCCCACCGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCgg < 2:7111172/150‑1 (MQ=255) cgGGCGCGCCCGCTCCCACAGGAGTAGCCCCCCACCTGCGGG‑CCTTACCGAACCGGTGGGCGCGGGCAATCCCCCGCAGAGGGCGGTACAGGCAGATCAAGCGCCAGGCACAAAAAAAGCCCCGAGGGGCGGTTTTGCGGTTGAGACCgg > 2:3987792/1‑150 (MQ=255) gcgcgcCCGCTCCCACCGGAGTGGCGCCGCACCTGCGGC‑CTTTCCCGACCCTGTGGGAGCGGGCATGCCCGCGACGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCtt < 1:5189671/150‑1 (MQ=255) cgcgcCCGCTCCCACCGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTa < 1:5951903/150‑1 (MQ=255) gcgcCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTaa > 1:981335/1‑150 (MQ=255) gcgcCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTaa > 2:2149888/1‑150 (MQ=255) cgcCCGCTCCCCCCGGCGTCGCGCCGCACCGGGGGG‑AATTACCGACCGTGGGGGTGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAg < 1:2965446/150‑1 (MQ=255) | GAAGCTGGCCTGGACCTGGACGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAG > NC_002947/867789‑868086 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |