| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 867,974 | A→C | 8.6% | intergenic (+69/+108) | PP_0750 → / ← mqo‑I | hypothetical protein/malate:quinone oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 867,974 | 0 | A | C | 8.6% | 822.4 / 18.6 | 284 | intergenic (+69/+108) | PP_0750/mqo‑I | hypothetical protein/malate:quinone oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base A (104/147); new base C (26/4); total (130/154) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.60e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 286 total aligned reads displayed.
GGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAG > NC_002947/867825‑868120 | gCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCAt < 2:4440727/150‑1 (MQ=255) cAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCagt > 2:4918984/1‑148 (MQ=255) aaGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTa < 2:2058917/150‑1 (MQ=255) ttCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATACAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAAc > 1:2142006‑M2/1‑149 (MQ=255) ttCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAAc > 1:1041085‑M2/1‑149 (MQ=255) cgAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAAcctgtg > 1:1306210‑M2/1‑144 (MQ=255) cgAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAAcctgtg > 1:6355249‑M2/1‑144 (MQ=255) gAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCCCAGGAGTCGCGCCGCACCTGCGGGCATTACCGACcctgtgg > 2:6480389‑M2/1‑143 (MQ=255) gAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAAcctgtgg > 2:1840984‑M2/1‑143 (MQ=255) gAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAAcctgtgg > 2:180322‑M2/1‑143 (MQ=255) gAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAAcctgtgg > 1:5361851‑M2/1‑143 (MQ=255) agcactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcatGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTgg > 2:5518779‑M1/99‑150 (MQ=255) agcactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagccagtgccggcctcttcgcgggcgcGCCCGCTCCCACAGGAGTCGCGCCGCACCTACGGGCATTACCGAACCTGTgg > 1:3018563‑M1/99‑150 (MQ=255) gCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAAcctgtggga > 2:4321624‑M2/1‑141 (MQ=255) gCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAAcctgtggga > 1:6482717‑M2/1‑141 (MQ=255) ctacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcgcGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAG‑c > 2:681774‑M1/95‑150 (MQ=255) ctacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcgcGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAG‑c > 2:6033927‑M1/95‑150 (MQ=255) aGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAAcctgtgggagc > 1:596208‑M2/1‑139 (MQ=255) acgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcatGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAG‑Cgg > 1:2868843‑M1/93‑150 (MQ=255) tGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGAGCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCGCCCCCCGGCGTCGCGCCGCCCCAGCGGGCCGTACCGCAccggggggcgcgggc < 2:6359706‑M2/150‑16 (MQ=255) ttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcatGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCAt > 1:1583096‑M1/89‑150 (MQ=255) gACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCCCCGGCGGGCAGTACCGAAccggtgggggcgggccagc < 2:1028550‑M2/150‑20 (MQ=255) gACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCATGc < 2:1712252/150‑1 (MQ=255) aCCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAAcctgtgggag < 1:683168‑M2/140‑11 (MQ=255) cAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCCCGCCCACAGGAGTCGCGCCCCACCGGCCGGCCTTACCGCACCGGTGGGGG‑CGGGCCTGCCcg > 2:3802320/1‑150 (MQ=255) aGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCATGCCcgc < 2:4724872/150‑1 (MQ=255) gcAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACCGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAG‑CGAGCATGCCCGCGaa < 2:3439694/150‑1 (MQ=255) gcAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCATGCCCGCGaa < 1:7335265/150‑1 (MQ=255) aaTGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCATGCCcgctccca < 2:7251036/150‑6 (MQ=255) cccTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCg < 2:3291184/150‑1 (MQ=255) cccTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCCCGCCCCCAGGAGTCGCGCCCCCCCAGCGGGCCTTAACGAACCCGTGGGGG‑CGGGGCTGGCCGCGGGGAGGGCg > 1:6062751/1‑150 (MQ=255) ccTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCATGCCcgc > 1:1824866/1‑139 (MQ=255) cTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCGACCACAGGAGTCGCGCCCCACCAGCCGGCCTTAACCAACCGGGGGGAG‑CCGGCATGCCCGCCAAGAGGGGGGt > 1:5443507/1‑150 (MQ=255) tGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTa > 2:2939378/1‑150 (MQ=255) aGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTGCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTACa < 2:3332057/150‑1 (MQ=255) gTACATCGAGATCATCGATAACGCCCGTGGCTTATCTGTAGCCTGGGCCGGCCTCTGCGGGGGCGCGCCCGCGCCCACCGGAGGCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTACAg < 1:4020248/150‑1 (MQ=255) gTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCATCGCGGGCCCGCCCCCGCCCCCAGGACTCCCGCCCCCCCGGCGGGCAGAAACGAACCGGGGGGCG‑CGGGCAGGCCCCCCCACAGGGCCGTACac > 2:4371252/1‑149 (MQ=255) cctCGAGATCATCGATAAAGCCCGGGGCTGATCTGTCGCCCGTGCGGGCCTGTTCGCGGGCGCGCCCGCTCCCCCCGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGTAG‑CGGGCATGCCCGCGAAGAGGGCGGTACAGGCt < 1:5248152/148‑1 (MQ=255) tCGAGATCATCTATAACGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTCCGGGGGCGCGCCCGCCCCCACCGGAGTCGCGCCGCACCGGCGGGCATTACCGACCCTGTGGGAG‑GGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGa < 1:1939280/150‑1 (MQ=255) tCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCGCCCACAGGAGTCGCGCCCCACCCGCGGGCCATACCCAACCGGGGGGCG‑CCGGCCTGCCCCCGCAGGGGGCGGTTCCGGCGGa > 2:3748142/1‑150 (MQ=255) cGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGAt < 2:1338899/150‑1 (MQ=255) agaTCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCa > 2:4826147/1‑150 (MQ=255) tcatcGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCCCCGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAgc < 2:613940/150‑1 (MQ=255) tcatcGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCCCGCCCACAGGAGTCGCGCCCCCCCAGCGGGCAGTACCCGACCGGGGGGGG‑CGGGCCAGCCCGCCGAGAGGGCGGTACAGGCAGATAAAgc > 2:2767444/1‑150 (MQ=255) gATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCCCACGAGTAGCGCCGCACCAGCCGGCAATACCCAACCGGTGGGGGCCGGGCA‑GCCCCCGAAGAGGGGGGTACACGCTGTTCAACCGCCAg > 2:717667/1‑150 (MQ=255) gATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCACTTCGCGGGCGCGGCCCCTCCCCCACGCGTGGCGGCCCACCGGCGGGCCTTTCCCGACCGGGGGGCG‑CGGGGCTGCCCGCGGCGAGGGCGGTTGAGGCTGTTAAAGCGcccc > 2:321873/1‑148 (MQ=255) cGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACaaaaa > 2:7355399/1‑150 (MQ=255) tggcgcttgatcagcctgtaccgccctcttcgcgggcatGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTgg < 1:3587656‑M1/52‑1 (MQ=255) tGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCGCCCACAGGCGGCGCGCCGCCCCTGCGGGCCTTACCGCCCCGGTGGGCG‑CGGGCCAGCCCGCGCAGAGGGCGGTGCAGGCTGGTCAAGCGCCACGCACCAACAACGccc > 2:7229770/1‑150 (MQ=255) tGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCCCACCCACCGGAGGCGCGCCGCCCCGGCGGGCCGTAACGACCCTGGGGGGC‑CCGGCCAGCCCGCCCACCGGGCGGTACAGGGGGATCCAGCCCCCCGCCCCAAAAACGccc > 2:6342771/1‑150 (MQ=255) tAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCCCACCCCCACGAGTCGCGCCCCACCGGCCGGCCATACCGAAACAGTGGGTG‑CGGGCAATCCCCCGACGTGGGCGGTACAGGCGGAACAAGCCCCACGCACAAAAAAAACCCCCAgggg > 2:3406895/1‑150 (MQ=255) aGCCTGTGCGGGCCTCTTCGCGGGCGGGCCCGCCCCCACAGGAGTCGCGCCGCACCTGCGGGCTTTACCGACCCTTTGGGAG‑GGGGCATGCCCGCGAAGTGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGc < 1:6773443/150‑1 (MQ=255) aGTGCCGGCCTCGTCGCGGGCGCGCCCGCTCCCACAGGAGTCCCGCCCCACCGGCCGGCCTTACCGCCCCGGGGGGAG‑CGGGCAAGCCCGCCCAGAGGGCGGTCCAGGCGGATCAAGCGCCCGGCCCAAAAAACGCCCCGCGGGGCggtg > 2:7306849/1‑147 (MQ=255) tGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACCGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGttttt < 2:5839898/150‑1 (MQ=255) gCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCTCGGGGCGtttttt < 2:1026132/150‑2 (MQ=255) cccGCCCACTTCCCGGGCGCGCCCGCTCCCACCGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCTCGGGGCGtttttt < 1:4882354/149‑2 (MQ=255) cGGCCTCTTCGCGGGCGCGCCCGCTCCCACTGGAGTCGCGCCGCACCTGCGGGCTTTACCGAACCTGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCTCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCg < 2:3604462/150‑1 (MQ=255) ggCCTCTTCGCGGGCGCGCCCGCTCCCACCGGAGTCGCGCCGCACCTGCGGGCATTACCGACCCGGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGt < 2:6541538/150‑1 (MQ=255) ctctTCGCGGGCGCGCCCGCGCCCACCGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTc < 2:7025557/150‑1 (MQ=255) tctTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCGGCGGGCCTTACCGAACCTGGGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGGTTTTGCGTTTCa > 2:5131256/1‑150 (MQ=255) ctTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCAATACCCAACCAGTGGGAG‑CGGGCCTGCCCGCGAAGAGGGCGGTACAGGCTGATAAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTAAg > 1:2406953/1‑150 (MQ=255) ttCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCAGCGGGCATTACCGAAACGGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCCAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGa > 2:4002054/1‑150 (MQ=255) tCGCGGGCGCGCCCGCCCCCCCCGGCGTCGCGCCGCACCTGCGGGCATTCCCGAACCTGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGAc < 1:4114372/150‑1 (MQ=255) ggggCGCCCCCGCTCCCACCGGCGGCCCGCCGCCCCTGCGGGAATTCCCGACCGTGGGGGCG‑CGGGCAGGCCCGCGACGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCgg < 1:3152794/149‑1 (MQ=255) cgGGCGCGCCCCCTCCCACAGGAGTCGCGCCCCACCATCGGGCCATACCGCACCCGTGGGAG‑CGGGCATGCCCCCGCAGAGGGCGGTACAGGCAGATCAAGCGCCAGGCACAAAAAAACCCCCCCGGGGCGGTTTTGCGGTTCAGAACgg > 2:1591530/1‑150 (MQ=255) gggCGCGCCCGCTCCCCCCGGAGGCGCGCCGCACCTGCGGGCATTCCCGACCCGGTGGGAG‑CGGGCACGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGc < 1:4770730/150‑1 (MQ=255) ggCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATGACCGAACCTGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCt < 2:2092090/150‑1 (MQ=255) GCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGc < 2:6640128‑M1/150‑1 (MQ=255) GCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGc > 2:4606618‑M1/1‑150 (MQ=255) CGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGACCCTGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTa > 1:7448372‑M1/1‑150 (MQ=255) tCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAAcctgtgggagcgggcgcgcccgcgaagaggccggcactggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtcggcaatctgc < 2:5303507‑M2/150‑112 (MQ=255) tCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAAcctgtgggagcgggcatgcccgcgaagaggccggcactggctacagatcagccacgggctttatcgatgatctcgat > 2:5559164‑M2/1‑39 (MQ=255) tCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAAcctgtgggagcgggcatgcccgcgaagaggccggcactggctacagatcagccacgggctttatcgatgatctcgat < 1:5559164‑M2/116‑78 (MQ=255) TCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTg < 2:4823483‑M1/150‑1 (MQ=255) TCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTg < 1:3214479‑M1/150‑1 (MQ=255) CCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAG‑CGGTCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCt > 1:4950979‑M1/1‑150 (MQ=255) caccgcaGTCGCGCCGCACCGGCGGGCATTCCCGACCCTGGGGGAG‑CGGGCAGGCCCGCGACGTGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAACAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCtt < 1:890001/144‑1 (MQ=255) cacaGGAGTCGCGCCGCACCTGCGGGCATTACCGAAcctgtgggagcgggcgcgcccgcgaagaggccggcactggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtcggcaatctgctcg < 1:5805583‑M2/150‑115 (MQ=255) cacaGGAGTCGCGCCGCACCTGCGGGCATTACCGAAcctgtgggagcgggcatgcccgcgaagagggcggcactggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtcggcaatctgctcg < 2:2549044‑M2/150‑115 (MQ=255) CACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCtt < 1:2795693‑M1/150‑1 (MQ=255) CACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCtt > 2:6380487‑M1/1‑150 (MQ=255) CACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCtt < 1:5851547‑M1/150‑1 (MQ=255) acaGGAGTCGCGCCGCACCTGCGGGCATTACCGAAcctgtgggagcgggcgcgcccgcgaagaggccggcactggctacatatcagccacgggctttatcgattatatcgatgtactcaggggcattgcgctggtcggcaatatgctcga < 1:3406238‑M2/150‑116 (MQ=255) acaGGAGTCGCGCCGCACCTGCGGGCATTACCGAAcctgtgggagcgggcgcgcccgcgaagaggccggcactggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtcggcaatctgctcga < 2:5033309‑M2/150‑116 (MQ=255) acaGGAGTCGCGCCGCACCTGCGGGCATTACCGAAcctgtgggagcgggcacgcccgcgaagaggccggcactggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtcggcaatctgctcga < 1:4438428‑M2/150‑116 (MQ=255) ACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAATCGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTg < 1:508560‑M1/150‑1 (MQ=255) ACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAG‑AGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGt > 2:3533660‑M1/1‑123 (MQ=255) gAGTCGCGCCGCACCTGCGGGCATTACCGAAcctgtgggagcgggcgcgcccgcgaagaggccggcactggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtcggcaatctgctcgacgaa < 2:2391447‑M2/150‑120 (MQ=255) tCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGccgccg < 2:3214477/150‑1 (MQ=255) tCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGccgccg > 2:1149232/1‑150 (MQ=255) gcgcCGCACCTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAg < 1:6017431/135‑1 (MQ=255) ccgcACCTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTACAgg > 2:5701789/1‑63 (MQ=255) ccgcACCTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTACAgg < 1:5701789/63‑1 (MQ=255) ccgcACCGGCGGGCATTCCCGAACCTGTGGGTG‑CGGGCAGGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGgctg < 1:3722852/150‑1 (MQ=255) gcACCTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGgcttct < 2:2272150/150‑1 (MQ=255) aCCTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCTCGGGGCGtttttt < 2:695022/104‑2 (MQ=255) aCCTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCTCGGGGCGtttttt > 1:695022/1‑103 (MQ=255) ccTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGctctc < 2:800376/150‑1 (MQ=255) cTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGctctct < 1:7392745/150‑1 (MQ=255) gggCATTACCGACCCTGGGGGCG‑CGGGCATGCCCGCGACGAGGGCGGTACCGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCa < 1:1777114/150‑1 (MQ=255) | GGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAG‑CGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAG > NC_002947/867825‑868120 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |