| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 867,985 | T→G | 14.7% | intergenic (+80/+97) | PP_0750 → / ← mqo‑I | hypothetical protein/malate:quinone oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 867,985 | 0 | T | G | 14.7% | 501.8 / 7.6 | 224 | intergenic (+80/+97) | PP_0750/mqo‑I | hypothetical protein/malate:quinone oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base T (68/112); new base G (29/7); total (105/119) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.44e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 225 total aligned reads displayed.
GAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCC > NC_002947/867840‑868130 | agcactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcatGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTgg > 1:2643653‑M1/99‑150 (MQ=255) cactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcgcGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGa > 1:7217161‑M1/97‑150 (MQ=255) cactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcatGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGa > 1:3962142‑M1/97‑150 (MQ=255) actacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcatGCCCGCTCCCACAGGAGTTGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAg > 2:554840‑M1/96‑150 (MQ=255) ctacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcgcGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGc > 2:681774‑M1/95‑150 (MQ=255) ctacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcgcGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGc > 2:2283397‑M1/95‑150 (MQ=255) acgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcatGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCgg > 2:7301338‑M1/93‑150 (MQ=255) acgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcatGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCgg > 1:2868843‑M1/93‑150 (MQ=255) ttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcatGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCAt > 1:1583096‑M1/89‑150 (MQ=255) ccGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCAt < 1:7427328/150‑1 (MQ=255) cGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCCCACCTGCGGGC‑CTTACCGAACCGGTGGGAGCGGGCATg > 2:4882354/1‑150 (MQ=255) gACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTTCGGGC‑AATACCGAACCTGTGGGCGCGGGCATGc > 2:7202842/1‑150 (MQ=255) gACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTATTCGCGGGCGCGCCCCCACCCACAGGGGTCGCGCCCCACCAGCGGGC‑CTTAACCAAACGGGGGGAGCGGGCAttc > 2:1392615/1‑148 (MQ=255) cccAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGcc < 2:1610975/149‑1 (MQ=255) aGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCcgc < 2:4724872/150‑1 (MQ=255) gcAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACCGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGAGCATGCCCGCGaa < 2:3439694/150‑1 (MQ=255) gcAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGaa < 1:5685855/150‑1 (MQ=255) aaTGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCcgctccca < 2:7250986/150‑6 (MQ=255) aaTGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAaga < 1:5490258/150‑1 (MQ=255) cccTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCg < 2:3291184/150‑1 (MQ=255) cccTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATGACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCg < 2:4324845/150‑1 (MQ=255) ccTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCcgc > 1:1824866/1‑139 (MQ=255) aGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTGCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACa < 2:3332057/150‑1 (MQ=255) tctaTCGATATCATCGATAAAGCCGGTGGCTGATCTGTAGCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACCGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAgg < 1:4823958/147‑1 (MQ=39) aTCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCACTTCGCGGGCGCGCCCCCGCCCACCGGGGTCGCGCCCCCCCGGCGGGC‑CTTAACGAACCGGTGGGAGCGGGCAATCCCGCGCAGGGGGCCGGACACGcgg > 2:3146121/1‑148 (MQ=255) tCGAGATCATCTATAACGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTCCGGGGGCGCGCCCGCCCCCACCGGAGTCGCGCCGCACCGGCGGGC‑ATTACCGACCCTGTGGGAGGGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGa < 1:1939280/150‑1 (MQ=255) tCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGa < 1:4959560/150‑1 (MQ=255) tCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCGCCCACAGGAGTCGCGCCCCACCCGCGGGC‑CATACCCAACCGGGGGGCGCCGGCCTGCCCCCGCAGGGGGCGGTTCCGGCGGa > 2:3748142/1‑150 (MQ=255) agaTCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGCGTCGCGCCGCACCAGCGGGC‑ATTACCGCACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCa > 2:4826099/1‑150 (MQ=255) agaTCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCCCGCCCACACGCGTCGCGCCCCACCGGCGGGG‑CTTACCGCACCGGGGGGGGCCGGCCTGCCCGCGCCGCGGGCGGTACACGCTGATCa > 2:4435387/1‑150 (MQ=255) atcatcGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCCCACCTGCGGGC‑ATTACCGAACCGGTGGGAGCGGGCCTGCCCGCGAAGAGGGCGGTACAGGCTGATCAAg > 2:6770931/1‑150 (MQ=255) tcatcGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCCCCGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAgc < 2:613940/150‑1 (MQ=255) tcatcGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCCCGCCCACAGGAGTCGCGCCCCCCCAGCGGGC‑AGTACCCGACCGGGGGGGGCGGGCCAGCCCGCCGAGAGGGCGGTACAGGCAGATAAAgc > 2:2767444/1‑150 (MQ=255) acatcGATAAAGCCCGGGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAgc < 2:2594389/149‑1 (MQ=255) gATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCCCGCCCCCACGAGTCGCGCCGCCCCGGCGGGC‑CATACCGAACCTGTGGGAGCGGGCAAGCCCCCGGAGAGGGCGGTGCAGGCGGATCAAGCGCCAg > 2:3357566/1‑150 (MQ=255) gATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCCCGCCCACCGGAGGCGCCCCCCACCAGCGGGCAATTACC‑AACCAGGGGGAGCGGGCCTGCCCGCGAAGAGGGCGGTACACGCTGATAAAGCGCCAg > 2:3800081/1‑150 (MQ=255) gATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCACTTCGCGGGCGCGGCCCCTCCCCCACGCGTGGCGGCCCACCGGCGGGC‑CTTTCCCGACCGGGGGGCGCGGGGCTGCCCGCGGCGAGGGCGGTTGAGGCTGTTAAAGCGcccc > 2:321873/1‑148 (MQ=255) aaaGCCCGTGGCGGATCTGGAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGca < 2:5670841/150‑1 (MQ=255) cGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACaaaaa > 2:7355399/1‑150 (MQ=255) gTGGCTTATCGGTAGCCCGGGCCGGCCTCTGCGCGGGCGCGCCCGCCCCCACCGGCGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGAATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACaaaaaa < 1:3150260/150‑1 (MQ=255) tggcgcttgatcagcctgtaccgccctcttcgcgggcatGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTgg < 1:3587656‑M1/52‑1 (MQ=255) ttaTCTGTAGCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCTAACCTGTGGGAGGGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGccc < 1:3519842/148‑1 (MQ=255) tGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCGCCCACAGGCGGCGCGCCGCCCCTGCGGGC‑CTTACCGCCCCGGTGGGCGCGGGCCAGCCCGCGCAGAGGGCGGTGCAGGCTGGTCAAGCGCCACGCACCAACAACGccc > 2:7229770/1‑150 (MQ=255) aGTGCCGGCCTCATCCCGGGCGCCCCCGCTCCCCCACGAGGCGCCCCGCCCCGGCGGGC‑AATCCCGAACCGGTGGGCGCGGGCCAGCCCGCGAAGAGGGCGGTACAGGCGGTTCACCCGCCCGGCCCCAAAAACGCCCCCAGGGGCGtgt > 2:7307091/1‑148 (MQ=255) gTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCTCGGGGCGtttt < 1:7350498/150‑1 (MQ=255) tGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGttttt < 1:6785193/150‑1 (MQ=255) tGCCGGCCTCTACGCGGGCGCCCCCGCTCCCACCGGAGTCGCGCCGCACCTGCGGGA‑ATTACCGAACCTGTGGGTGCGTGAATGCCCTCTAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCTCGGGGCGttttt < 1:604125/150‑1 (MQ=255) gCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCTCGGGGCGtttttt < 2:1026132/150‑2 (MQ=255) ccGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCCCACCAGCCGGC‑CTTACCGCACCCGTGGGAGCGGGCATTCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGc > 2:1090393/1‑150 (MQ=39) cGGCCTCTTCGCGGGCGCGCCCGCTCCCACTGGAGTCGCGCCGCACCTGCGGGC‑TTTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCTCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCg < 2:3604462/150‑1 (MQ=255) ggCCTCGTCGCGGGCGCGCCCGCTCCCCCCGGAGTCGCGCCGCACCGGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGt < 1:5265057/150‑1 (MQ=255) cccctgcgcgGGCGCCCCCGCGCCCCCCGGAGCCGCGCCGCACCGGCGGGC‑AGTACCGACCCGGGGGGCGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGttt < 1:3259065/144‑1 (MQ=255) ccTCTTCGCGGGCGCGCCCGCTCCCACCGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGttt < 2:4929381/150‑1 (MQ=255) tctTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCGGGGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCCCAAAAAACGCCCCGAGGGGCGGTTTTGCGGTTCa > 2:1777114/1‑150 (MQ=255) ctTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGC‑AATACCCAACCAGTGGGAGCGGGCCTGCCCGCGAAGAGGGCGGTACAGGCTGATAAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTAAg > 1:2406953/1‑150 (MQ=255) ttCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCAGCGGGC‑CTTACCGAACCGGGGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCCAGCGCCAGGCACAAAAAACGCCCCCAGGGGCGGTTTTGCGTTTCCGa > 2:2041739/1‑150 (MQ=255) tCGCGGGCGCGCCCGCCCCCCCCGGCGTCGCGCCGCACCTGCGGGC‑ATTCCCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGAc < 1:4114372/150‑1 (MQ=255) cgGGCGCGCCCGCTCCCACAGGAGTAGCCCCCCACCTGCGGGC‑CTTACCGAACCGGTGGGCGCGGGCAATCCCCCGCAGAGGGCGGTACAGGCAGATCAAGCGCCAGGCACAAAAAAAGCCCCGAGGGGCGGTTTTGCGGTTGAGACCgg > 2:3987792/1‑150 (MQ=255) cgGGCGCGCCCCCTCCCACAGGAGTCGCGCCCCACCATCGGGC‑CATACCGCACCCGTGGGAGCGGGCATGCCCCCGCAGAGGGCGGTACAGGCAGATCAAGCGCCAGGCACAAAAAAACCCCCCCGGGGCGGTTTTGCGGTTCAGAACgg > 2:1591530/1‑150 (MQ=255) ggCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATGACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCt < 2:2092090/150‑1 (MQ=255) gcgcgcCCGCTCCCACCGGAGTGGCGCCGCACCTGCGGCC‑TTTCCCGACCCTGTGGGAGCGGGCATGCCCGCGACGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCtt < 1:5189671/150‑1 (MQ=255) cgcgcCCGCTCCCACCGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTa < 1:5951903/150‑1 (MQ=255) cgcCCGCTCCCACTGGAGGCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGACGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAg < 1:2965461/150‑1 (MQ=255) GCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGc < 2:6639832‑M1/150‑1 (MQ=255) GCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGc > 2:4606618‑M1/1‑150 (MQ=255) CGCTCCCCCCGGAGGCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTa > 2:7149209‑M1/1‑150 (MQ=255) CGCTCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGGGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTa > 2:6370761‑M1/1‑150 (MQ=255) TCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTg < 2:4823483‑M1/150‑1 (MQ=255) TCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTg < 2:5777360‑M1/150‑1 (MQ=255) TCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTg < 1:6915842‑M1/150‑1 (MQ=255) TCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTg < 1:6346678‑M1/150‑1 (MQ=255) TCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTg < 1:3214477‑M1/150‑1 (MQ=255) caccgcaGTCGCGCCGCACCGGCGGGC‑ATTCCCGACCCTGGGGGAGCGGGCAGGCCCGCGACGTGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAACAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCtt < 1:890001/144‑1 (MQ=255) CACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCtt < 1:6380580‑M1/150‑1 (MQ=255) CACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCtt < 1:5429123‑M1/150‑1 (MQ=255) CACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCtt > 2:6380487‑M1/1‑150 (MQ=255) CACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCtt < 1:468239‑M1/150‑1 (MQ=255) accggAGTCGCGCCGCACCTGCGGGC‑ATTCCCGACCCGGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTg < 1:2314613/147‑1 (MQ=255) accggAGGCGCGCCGCACCTGCGGGC‑ATTACCGAACCGGTGGGCGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTg < 1:5750160/147‑1 (MQ=255) ACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTg > 2:6509946‑M1/1‑150 (MQ=255) ACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGAGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGt > 2:3533660‑M1/1‑123 (MQ=255) tCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGccgccg < 2:3214477/150‑1 (MQ=255) tCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGccgccg > 1:4923045/1‑150 (MQ=255) gcgcCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAg > 2:6017431/1‑135 (MQ=255) gcgcCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAg < 1:6017431/135‑1 (MQ=255) gcgcCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCggg > 2:1151411/1‑150 (MQ=255) gcACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGACCTCGAAGAGGTCGGTACAGGGTGATCAATCGCCAGTCACAATATTCGGCCCTAGTGGCTTTTTTGCGTTTAATTCCGTCTTAAGCGTAGTGCTTGGCCGCCGGgctgct < 2:2271434/150‑1 (MQ=255) aCCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCTCGGGGCGtttttt < 2:695022/104‑2 (MQ=255) ccTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGctctc < 2:800376/150‑1 (MQ=255) cTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGctctct < 1:7392745/150‑1 (MQ=255) gCGGGC‑ATTACCGAGCCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGc > 2:626349/1‑150 (MQ=255) cGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGcc > 1:1536871/1‑150 (MQ=255) cGGGC‑ATGACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGcc < 2:6062751/150‑1 (MQ=255) gggC‑ATTACCGACCCTGGGGGCGCGGGCATGCCCGCGACGAGGGCGGTACCGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCa < 1:1777114/150‑1 (MQ=255) gggC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCa > 2:5453404/1‑150 (MQ=255) aCCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAAAGCCCCGAGGGGCGTTTTTGCTTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTACAg > 2:2687890/1‑150 (MQ=255) ccGAACCTGTGGGAGCGGGCATGCCCGCTAAGAGGGCGGTAAAGGCTGATAAAGCGCCAGGAACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAgg < 1:4026930/150‑1 (MQ=255) ccGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAgg > 2:6394973/1‑150 (MQ=255) ccGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAgg > 1:303236/1‑150 (MQ=255) aaCCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGcc < 2:2844759/150‑1 (MQ=255) | GAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGC‑ATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCC > NC_002947/867840‑868130 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |