| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 919,675 | G→C | 6.0% | intergenic (‑143/+48) | PP_5458 ← / ← PP_0800 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 919,675 | 0 | G | C | 6.0% | 1021.4 / 40.8 | 300 | intergenic (‑143/+48) | PP_5458/PP_0800 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (134/148); new base C (12/6); total (146/154) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.46e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.84e-01 | |||||||||||
Only 100 of 305 total aligned reads displayed.
TGGACATTTGAAACTACCTTCTTGCGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATCCTGCACATGCAAGGT > NC_002947/919526‑919824 | ggACATTTGAAACTACCTTCTTGCGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGc < 1:17258/150‑1 (MQ=255) ttGAAACTACCTTCTTGCGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGc > 2:5521158/1‑150 (MQ=255) ttGAAACTACCTTCTTGCGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGc < 1:1787890/150‑1 (MQ=255) gAAACTACCTTCTTGCGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGccc > 1:5322251/1‑150 (MQ=255) gAAACTACCTTCTTGCGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGccc < 1:3108748/150‑1 (MQ=255) gAAACTACCTTCTTGCGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGccc > 1:1446059/1‑150 (MQ=255) aaaCTACCTTCTTGCGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGcccc < 1:856047/150‑1 (MQ=255) aaaCTACCTTCTTGCGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGcccc > 1:946965/1‑150 (MQ=255) cTACCTTCTTGCGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGCCGAAAGCCCCGtt < 2:2379103/150‑2 (MQ=255) ccTTCTTGCGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTa < 2:6460766/150‑1 (MQ=255) ttcttGCGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAgg > 2:2479761/1‑150 (MQ=255) ttcttGCGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAgg > 1:5991744/1‑150 (MQ=255) tGCGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGgcgc > 1:3378862/1‑150 (MQ=255) tGCGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTGTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGgcgc < 2:3981101/150‑1 (MQ=255) ggTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTg > 2:146316/1‑150 (MQ=255) gTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGc > 1:2811560/1‑150 (MQ=255) gTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAggg < 2:6105711/150‑1 (MQ=255) gAGGACCGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGTCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCt < 1:6368406/150‑1 (MQ=255) aGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCtt < 1:1057072/150‑1 (MQ=255) gACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTgg < 1:7091931/150‑1 (MQ=255) cAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCa < 2:5684805/150‑1 (MQ=255) aGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAg > 2:805274/1‑150 (MQ=255) gggTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGc < 1:1016335/150‑1 (MQ=255) ggTAAAGTTAGTCCTTTCAGTGCACCCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCGAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCt > 1:6510363/1‑150 (MQ=255) gTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACATGGCGCCGCCTTGGCAGGCTa < 2:6212727/150‑1 (MQ=255) gTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCtc > 1:2152372/1‑149 (MQ=255) tAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGTGCCGCCTTGGCAGGCTAg < 1:4937244/150‑1 (MQ=255) aaaGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGa > 2:4495790/1‑150 (MQ=255) aGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAACAGGTAACGATCATTGGGTTGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGaaa < 2:4429003/150‑1 (MQ=255) aGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGaaa < 1:2306979/150‑1 (MQ=255) gTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAAc < 1:6658004/150‑1 (MQ=255) ttAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAAcc > 2:4409875/1‑150 (MQ=255) ttAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAAcc > 2:6922427/1‑150 (MQ=255) tCCTTTCAGTGCACTCGAATCAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATa > 1:2519309/1‑150 (MQ=255) cTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATaaa < 1:4030883/150‑1 (MQ=255) tttCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAg > 1:1301900/1‑150 (MQ=255) tttCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAg > 1:7217275/1‑150 (MQ=255) attCAGTGCACTCGAAACAGAGCGAAGTGCGATAACCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAg < 2:2321337/149‑1 (MQ=255) cAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCg < 2:1149160/150‑1 (MQ=255) aGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGt < 2:5602648/150‑1 (MQ=255) tCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAAc > 1:5435844/1‑150 (MQ=255) tCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAAc > 2:4049913/1‑150 (MQ=255) tCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAAc < 1:4605658/150‑1 (MQ=255) tCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAAc > 1:661103/1‑150 (MQ=255) cGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAAcc > 1:3137763/1‑150 (MQ=255) gAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCg < 2:1804191/150‑1 (MQ=255) gAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCg > 1:692474/1‑150 (MQ=255) aaCAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCggg < 1:1175304/150‑1 (MQ=255) aaCAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCggg < 2:135182/150‑1 (MQ=255) aaCAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCggg < 2:3656699/150‑1 (MQ=255) agCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCgg < 1:738435/144‑1 (MQ=255) cGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCAt < 1:5057152/150‑1 (MQ=255) gAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATg < 2:5315403/150‑1 (MQ=255) tGCGATAGGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGtt < 2:1222139/150‑1 (MQ=255) tGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGtt < 1:7129909/150‑1 (MQ=255) aTAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTgc < 2:43462/150‑1 (MQ=255) aTAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTgc < 1:624598/150‑1 (MQ=255) aGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCa < 2:6824605/150‑1 (MQ=255) gCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCaa > 1:3655658/1‑150 (MQ=255) gCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCaa > 1:1625812/1‑150 (MQ=255) cACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCaaa > 1:3491160/1‑150 (MQ=255) aCTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAAc < 2:7079590/150‑1 (MQ=255) tGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAAccc > 2:6635120/1‑150 (MQ=255) gTTGCTCAAAAGTTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCa < 1:264669/150‑1 (MQ=255) cAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCt > 1:1875924/1‑150 (MQ=255) cAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCt < 1:1223692/150‑1 (MQ=255) aaaaGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTg > 2:1611998/1‑150 (MQ=255) aaGCTAACGATCATTGGGAGGAACAACGGGGCTTTCCGCGAAAGCCCCGAGCAACGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCa < 1:5694337/150‑1 (MQ=255) aGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCaa < 2:3106028/150‑1 (MQ=255) gTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGCTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGc > 2:1043152/1‑150 (MQ=255) tAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCt > 2:383809/1‑150 (MQ=255) tAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCt > 1:6066584/1‑150 (MQ=255) aaCGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCtt < 1:3015143/150‑1 (MQ=255) aaCGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCtt < 2:5332381/150‑1 (MQ=255) aaCGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCtt < 1:5963054/150‑1 (MQ=255) gATCATTGGGTGGTACAAGTGGGCTTTCGGCGAATGCCCCGTGCTAGGGCTCCTGCACAGGTGGCCGCCTTGGGAGTCTAGAAACCGATAAAGGCGTATTATACCGGGGTTTCATGGGTTGTGCGGTAAACCAGTGCCTGCAAGCtttag < 2:5851744/150‑4 (MQ=255) gATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGcc > 2:6696235/1‑150 (MQ=255) gATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGcc > 1:5994165/1‑150 (MQ=255) gATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGcc < 1:4193331/150‑1 (MQ=255) tCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGt < 1:6634679/150‑1 (MQ=255) tGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAgc < 1:3869723/150‑1 (MQ=255) tGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGAGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCtt > 2:1504791/1‑150 (MQ=255) gAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCa > 2:2046918/1‑150 (MQ=255) acaacGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATc < 2:1933605/150‑1 (MQ=255) aacGGGGCTTCCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATCCt < 2:1069925/150‑1 (MQ=255) aacGGGGCTATCGGCGAAACCCCCGAGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCAAGAAACCGATAAAGGCGTAAAAAACCGGGGATTCATGGCTAGTGCGCAAACCCACTGCCTGCAAGCTTGCCGTCAGCGCTTCATCCt > 1:1575617/1‑150 (MQ=255) acGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATCCTg > 2:7348344/1‑150 (MQ=255) cGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATCCTGc > 1:4392080/1‑150 (MQ=255) ggggCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATCCTGca > 1:7168810/1‑150 (MQ=255) ggggCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATCCTGca > 1:3435279/1‑150 (MQ=255) ggggCTTTCGCCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATCCTGca > 2:6272472/1‑150 (MQ=255) ggCTTTCGCCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATCCTGcaca > 2:2842489/1‑150 (MQ=255) gccgtCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAACGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATCCTGCACAt < 1:3312062/146‑1 (MQ=255) ttCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATCCTGCACATGCa < 1:5781750/150‑1 (MQ=255) tCGGCGAAAGCCCCGTGCTCGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATCCTGCACATGCaa > 2:3303967/1‑150 (MQ=255) tCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATCCTGCACATGCaa < 2:581029/150‑1 (MQ=255) tCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATCCTGCACATGCaa < 2:5004104/150‑1 (MQ=255) tCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATCCTGCACATGCaa < 2:4804293/150‑1 (MQ=255) gcGGCGAAAGCCCCGAGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAACGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATCCTGCACATGCaa < 2:3517096/149‑1 (MQ=255) ggCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATCCTGCACATGCAAgg > 2:4556001/1‑150 (MQ=255) | TGGACATTTGAAACTACCTTCTTGCGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATCCTGCACATGCAAGGT > NC_002947/919526‑919824 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |