| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 975,193 | G→C | 6.6% | intergenic (+39/+130) | ycfJ → / ← suhB | flagella biosyntheis regulator/bifunctional inositol monophosphatase/glycerol‑2‑phosphatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 975,193 | 0 | G | C | 6.6% | 623.9 / 3.1 | 221 | intergenic (+39/+130) | ycfJ/suhB | flagella biosyntheis regulator/bifunctional inositol monophosphatase/glycerol‑2‑phosphatase |
| Reads supporting (aligned to +/- strand): ref base G (123/72); new base C (15/3); total (138/83) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.21e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 225 total aligned reads displayed.
CTATTCCATCGGTGATCAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑GGGTTTACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTG > NC_002947/975046‑975342 | cTATTCCATCGGTGATCAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGAt > 1:1449067/1‑150 (MQ=255) tATTCCATCGGTGATCAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATc > 1:4699158/1‑150 (MQ=255) tATTCCATCGGTGATCAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATc < 1:718939/150‑1 (MQ=255) tATTCCATCGGTGATCAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATc > 2:1742099/1‑150 (MQ=255) tATTCCATCGGTGATCAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGACAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATc < 2:4914809/150‑1 (MQ=255) ttCCATCGGTGATCAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCt > 2:4861378/1‑150 (MQ=255) cATCGGTGATCAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACa > 1:1930244/1‑150 (MQ=255) cATCGGTGATCAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCGTCGCGGGTAAAACCGAACATACa > 1:2491338/1‑150 (MQ=255) aTCGGTGATCAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAg < 1:986143/150‑1 (MQ=255) aTCGGTGATCAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAg < 2:5115632/150‑1 (MQ=255) aTCGGTGATCAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAg > 2:2859580/1‑150 (MQ=255) aTCGGTGATCAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATACTACAg > 1:3800149/1‑150 (MQ=255) aTCGGTGATCAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCCATCCTACAg > 1:6478876/1‑150 (MQ=255) tCGGTGATCAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAgg > 2:1837267/1‑150 (MQ=255) tCGGTGATCAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAgg > 2:6112293/1‑150 (MQ=255) ggTGATCAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAggg‑‑‑g < 2:3219346/150‑1 (MQ=255) gTGATCAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑Gc > 2:4636424/1‑150 (MQ=255) gTGATCAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑Gc > 2:2522007/1‑150 (MQ=255) gTGATCAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATACTACAGGG‑‑‑Gc > 1:1099144/1‑150 (MQ=255) tGATCAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCa < 2:7226453/150‑1 (MQ=255) aTCAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAAt > 2:6455386/1‑150 (MQ=255) tCAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATg < 1:6565077/150‑1 (MQ=255) aGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCg > 1:6061870/1‑150 (MQ=255) aGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATACTACAGGG‑‑‑GCAATGCg > 2:1234545/1‑150 (MQ=255) ggTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGa < 1:3236093/150‑1 (MQ=255) ggTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGa < 1:2430547/150‑1 (MQ=255) ggTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAAAGCGa > 1:6245363/1‑150 (MQ=255) tAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATc < 1:12197/150‑1 (MQ=255) gCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGCGTCTGTGCCGGCCTCTTAGCGGGTAAAACCGATACAACAGGG‑‑‑GCCAAGCGATACAt > 1:1856764/1‑150 (MQ=255) cAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCATg > 2:7306652/1‑150 (MQ=255) aaGGTGAAGATGGATCTCGAGCCGGGATCGACCATTCCGCTGGACTAGACTGGAAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGTTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATGCATGt < 2:3988459/150‑1 (MQ=39) aaGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCATGt > 2:3412143/1‑150 (MQ=255) aGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCATGTa > 1:554578/1‑150 (MQ=255) aGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCATGTa > 2:4291355/1‑150 (MQ=255) gAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCATGTAGGAg > 2:6936624/1‑150 (MQ=255) gAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGGAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCAGGgaggag > 1:1343912/1‑150 (MQ=255) gATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑gg < 2:1930244/150‑1 (MQ=255) tGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCAGGTAGGAGC‑GGGt > 2:2699823/1‑150 (MQ=255) ggATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAAACCGATCCTACAGGG‑‑‑GCAATGCGATCCATGTAGGTGC‑GGGtt > 1:6516856/1‑150 (MQ=255) aTCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑GGGTTTa > 2:4374750/1‑150 (MQ=255) aTCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAAAGCGAGCCATGGTGGAGC‑GGGTTTa > 1:6852254/1‑150 (MQ=255) aTCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGAGTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑GGGTTTa < 2:6535167/150‑1 (MQ=255) tCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCCACAGGG‑‑‑GCCATGCGAGGCCTGGAGGTGC‑GGGgttgc > 1:5203750/1‑148 (MQ=38) gAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAATCCCGATCCTACAGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑GGGTTTACCcgc > 2:4753008/1‑150 (MQ=255) gAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑GGGTTTACCcgc < 2:2389391/150‑1 (MQ=255) aGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCATg < 2:3915625/130‑1 (MQ=255) ccGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑GGTTTTACCCGCGaa < 1:6119151/150‑1 (MQ=255) cGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑GGGTTTACCCGCGAag > 2:753707/1‑150 (MQ=255) gggATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGATCGCATTGC‑‑‑CCCTGTAGGATC‑GGGTTTACCCGCGAaga < 2:3776189/150‑1 (MQ=18) aTCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑GGGTTTACCCGCGAAGAGGt > 2:3686163/1‑150 (MQ=255) gACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑GGGTTTACCCGCGAAGAGGTCgg > 2:1395746/1‑150 (MQ=255) gACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑GGGTTTACCCGCGAAGAGGTCgg > 2:5308476/1‑150 (MQ=255) gACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑GGGTTTACCCGCGAAGAGGTCgg > 1:5445372/1‑150 (MQ=255) gACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGAGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑GGGTTTACCCGCGAAGAGGTCgg > 2:5926416/1‑150 (MQ=255) aCCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCCATCCTACAGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑GGGTTTACCCGCGAAGAGGTCGGt > 1:6734143/1‑150 (MQ=255) aCCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGAGGTGCGGTGTCTGTGCCGGCCTCGTCGCGGGTAAACCCGATGCTACAGGG‑‑‑GGCAGGGGATCGAGGTAGGGGC‑GGGTTTGCCCGCGGAGgggtgggt > 1:3444143/1‑150 (MQ=255) ccATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATTCGATCCATGTAGGAGC‑GGGTTTACCCCCGAAGAGGTCGGTa > 1:1068640/1‑150 (MQ=255) cGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑GGGGTTACCCGCGAAGAGGTCGGTACAGGcc > 1:588380/1‑150 (MQ=255) cGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAAACCCATCCGACAGGG‑‑‑GCAAAGCGATCCATGTAGGAGC‑GGGTTTAACCGCGAAGAGGTCGGTTAAGGcc > 1:3168241/1‑150 (MQ=39) tGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑GGGTTTACCCGCGAAGAGGTCGGTACAGGCCACg > 2:1030045/1‑150 (MQ=255) ggACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCCGGTAGGAGC‑GGGTTTACCCGCGAAGAGGTCGGTACAGGCCACGc > 2:516534/1‑150 (MQ=255) gACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑GGGTTTACCCGCGAAGAGGTCGGTACAGGCCACGCa > 2:6046494/1‑150 (MQ=255) aaGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑ggg < 2:6693331/114‑1 (MQ=255) aaGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑ggg > 1:6693331/1‑114 (MQ=255) aaTGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑GGGTTTACCCGCGAAGAGGTCGGTACAGGCCACGCAAAacca > 2:4205573/1‑150 (MQ=255) aaTGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCATGGAGGAGC‑GGGTTTACCCGCGAAGAGGTCGGTACAGGCCACGCAAAacca > 2:2199252/1‑150 (MQ=255) ggCACGCTGATGCTGAGCGACGCGGGACTGTGATTTGCGGTGCCGTGGCCGGCCTCTTCGCGGGAAAACCCGAGCCAACCGGG‑‑‑GCAAGGCGATCCTTGTCGGAGC‑GGGTTTACCCGCGAAGAGGTCGGTACAGGCCACGCAAAAccacca < 1:3693554/150‑1 (MQ=25) ggCAAGCTGTTTCTTCGCGACGGGGGCCTGTGATTTGGGGTGGCTGTGCCGGCCTCTGGGGGGCTAACCCCCACCCCACCGGG‑‑‑GCAAGGCGATCATTTTTGCCGG‑GGTTTAACCCGCGAAGAGGTCGGTACAGGCCACGCAAAAccacca < 2:30958/150‑1 (MQ=255) gccacgCTGTTTCGGCGCGACGCGGGGCATTTTTGTGGGGTGTCTGGGCCGCCCTCTGCGCGGTAACCCCCGATCCCACCGGG‑‑‑GAAATGCGATCCATGTCGGAGG‑GGTTTAACCCGCGAAGAGGTCGGTACAGGCCACGCAAAAccacca < 2:30425/145‑1 (MQ=255) aaGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTTAACCCGATCCAAAAGGG‑‑‑GCCAAGCGATCCAGGTTGGAGC‑GGGGTTACCCGCGAAGAGGGCGGTGAAGGCCACCCAAAAACACCACGc > 1:2077108/1‑150 (MQ=25) tGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAAACCGATCCTACAGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑GGGTTTACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGc > 1:3601835/1‑150 (MQ=255) gAGCGAAGCGGGTCTGTGATTTGGGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑GGGTTTACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCa < 2:7443950/150‑1 (MQ=255) tgctatgCGGTTCTGTGTTTTGGGGTGTCGGGGCCGGCCTCTTCGCGGGTAAACCCGATCCTACCGGG‑‑‑GCATTGCGATCCATTTAGGAGC‑GGGTTTACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCAc < 1:6051477/144‑1 (MQ=25) aGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAAAACCATCCAACAGGG‑‑‑GGAAATCGATCCAAGGAGGAGCGGGGTTTACCC‑CCCAGAGGGCGGGAAAGGCCACCCCAAACCACCACGCACAAAAAATCAc > 1:2570776/1‑150 (MQ=255) gCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑GGGTTTACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCAcc > 2:4559553/1‑150 (MQ=255) ggggTCTGTGTTTTGCGGTGTCTGTGCGGGCCTCTTCGGGGGTAAACCCGATCCTACAGGG‑‑‑GAAATGCGATCATTGTAGGAGG‑GGTTTTACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAaga < 1:7398147/149‑1 (MQ=255) aGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCATGTTGGAGC‑GGGTTTACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCACAAGAGGTGCt > 1:1697494/1‑150 (MQ=255) gTGATTTGCGGTGTCTGTGCCGGCCTCGTCGCGGGTAAACCCCATCCTACAGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑GGGGTTTCCCGCGAAGAGGTCGGTACAGGTCACGCAAAACCACCAGGCACAAAAAAGCACCACCAGAGGTGCtt > 1:3561357/1‑150 (MQ=255) ttttGCGGTGTCTGTGCGGGCCTCTTCGGGGGTAAACCCGATCCTACAGGG‑‑‑GAATTGCTATCCTTGTATGCGG‑GTTTTCACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCttttt < 1:2218068/149‑1 (MQ=255) aTTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑GGGTTTACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCttttt > 1:7368271/1‑150 (MQ=255) ggggTGTCTGTGCCGGCCTCTTCGCGGTAAAACCCGATCCTCCCGGG‑‑‑GAAATGCGATCAATGTTGTCGC‑GGGTTTACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTtttgttt < 2:1987104/148‑1 (MQ=37) ggggTGTCTGGGCCGGCCCCTGCGCGGTTAAACCCGATCCTACCGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑GGGTTTACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTtttgttt < 2:4699158/148‑1 (MQ=38) ggTGTCTGTGCCGGCCTCTTCGCGGTTAAACCCGATCCTACTGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑GGGTTTACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGc < 2:5496365/150‑1 (MQ=255) ggTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑GGGTTTACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGc > 2:3532557/1‑150 (MQ=255) ggTGTCTGGGCCGGCCGCGTCGCGGGTAACCCCGAGCCTCCCGGG‑‑‑GCACTGCGATCCCGGTCGGCGC‑GGGTTTACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCAC‑AAAAAGCACCTCTTGAGGTGCttttttgtgcct < 2:6478876/150‑8 (MQ=25) gtgCCGGCCTCTTCGAGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCCATCCAAGTAGGATC‑CGGTTTACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCGTTTTGTTTGCCGGCAAt > 2:6636111/1‑150 (MQ=255) tgCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATTCGATGCATGTAGGAGC‑GGGTTTACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCACGCACAAAAAAGCACCACAAGAGGTGCTTTTTGTTTGCCGGCaaac > 2:2782833/1‑148 (MQ=255) cGGCCTCTTCGCGGGTAAACCCGATCCAACAGGG‑‑‑GCAATGCGATACATGTAGGAGC‑GGGTTTACCCCCGAAGAGGTCGGTACAGGCCACGCAAAAACACCAGGCACAAAAAAGCACCACAAGAGGTGCTTTTTTTTTGCCGGCAAACTgc > 1:4778283/1‑150 (MQ=38) ggCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑GGGTTTACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTgcg > 2:5424155/1‑150 (MQ=255) ctTCGGGGTTAAACCCTATCCTACCGGG‑‑‑TAACGGCTTTCCTTGTTGGCGG‑GGTTTCACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTGCGCTTAg < 1:1395746/150‑1 (MQ=255) ctTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑GGGTTTACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTGCGCTTAg > 1:1171964/1‑150 (MQ=255) gggTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑GGGTTTACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTc > 1:672578/1‑150 (MQ=255) tAACCCCTACCCTACTGGG‑‑‑GAAATGCTTTCCATTTTGGTGG‑GGTTTTACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATg < 1:4623621/150‑1 (MQ=255) tAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑GGGTTTACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATg > 1:7259554/1‑150 (MQ=255) tAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑GGGTTTACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATg > 2:5335876/1‑150 (MQ=255) cccGATCCTACAGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑GGGTTTACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCttt > 1:3705130/1‑150 (MQ=255) cGATCCTACCGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑GGGTTTACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCt < 2:5645320/150‑1 (MQ=255) cGACCCTACCGGG‑‑‑GCAATGCTTTCCTTGTTGGCGC‑GGTTTTACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCt < 1:2859580/150‑1 (MQ=255) gATCCTACAGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑GGGTTTACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTg > 1:5693535/1‑150 (MQ=255) gATCCTACAGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑GGGTTTACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTg > 1:4369655/1‑150 (MQ=255) | CTATTCCATCGGTGATCAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGG‑‑‑GCAATGCGATCCATGTAGGAGC‑GGGTTTACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTG > NC_002947/975046‑975342 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |