| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,018,180 | A→T | 28.4% | intergenic (+56/+75) | prfC → / ← potF‑I | peptide chain release factor 3/putrescine‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,018,180 | 0 | A | T | 28.4% | 342.0 / 172.6 | 207 | intergenic (+56/+75) | prfC/potF‑I | peptide chain release factor 3/putrescine‑binding protein |
| Reads supporting (aligned to +/- strand): ref base A (52/95); new base T (23/35); total (77/130) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.30e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.90e-01 | |||||||||||
Only 100 of 210 total aligned reads displayed.
CCTGACCTACCTGGCGCCGACCCGGGTCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGG‑CCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCG > NC_002947/1018031‑1018328 | ccTGACCTACCTGGCGCCGACCCGGGTCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGa < 2:6709316/150‑1 (MQ=255) cTGACCTACCTGGCGCCGACCCGGGTCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGaa < 2:7303409/150‑1 (MQ=255) tGACCTACCTGGCGCCGACCCGGGTCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTAt < 2:6351114/150‑1 (MQ=255) tGACCTACCTGGCGCCGACCCGGGTCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAAt < 1:693655/150‑1 (MQ=255) cctacctGGCGCCGACCCGGGTCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCAc < 1:5960886/150‑1 (MQ=255) ctacctGGCGCCGACCCGGGTCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCCGCCTAGCGGCCCTTCGCGGGCACGCCCGCTCCCACAGGTATCAca < 1:5316019/150‑2 (MQ=38) tacctGGCGCCGACCCGGGTCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCAcat < 2:6266684/150‑3 (MQ=255) tacctGGCGCCGACCCGGGTCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGACTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCa < 2:3112398/150‑1 (MQ=255) acctGGCGCCGACCCGGGTCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAg < 2:1677438/150‑1 (MQ=255) tGGCGCCGACCCGGGTCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGAcc > 2:6118589/1‑150 (MQ=255) tGGCGCCGACCCGGGTCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCGCCCCCACGGATCACCAGAcc > 1:3886022/1‑150 (MQ=255) gcgcCGACCCGGGTCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCTGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTg < 1:5264564/150‑1 (MQ=255) cgcCGACCCGGGTCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCGGCCCTTCGCGGGCACGCCCGCTCCCACAGGTATCACATGACCtcc < 1:2086538/150‑3 (MQ=255) cgcCGACCCGGGTCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTATCACATGACCtcc < 2:4832282/150‑3 (MQ=255) cgcCGACCCGGGTCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTATCACATGACCtcc < 2:3279895/150‑3 (MQ=255) cgcCGACCCGGGTCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCTGACCtcc < 2:4047117/150‑3 (MQ=255) cgcCGACCCGGGTCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCtcc < 2:1188794/150‑3 (MQ=255) cgcCGACCCGGGTCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTgg < 2:6973778/150‑1 (MQ=255) gcCGACCCGGGTCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGa < 1:6057063/150‑1 (MQ=255) cGACCCGGGTCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAgg < 2:2463622/150‑1 (MQ=255) ccGGGTCACCCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGACATCGGGGCTGCTTTGCATCCCTTCTCGGGCTCGCCCGCTGCCACCGGAATCACCAGACCTGTAGGTCAt < 2:3779860/150‑1 (MQ=255) ccGGGTCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCAt < 2:541536/150‑1 (MQ=255) ccGGGTCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCAt < 1:868750/150‑1 (MQ=255) ccGGGTCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCAt < 2:4084402/150‑1 (MQ=255) cGGGTCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACATGACCTCCAGGTctgg < 2:4808424/150‑4 (MQ=38) gggTCACCCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCTAGGTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAACTCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCAtgt < 2:6182231/150‑1 (MQ=255) gggTCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCAtgt < 2:5744444/150‑1 (MQ=255) gggTCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCAtgt < 1:4084837/150‑1 (MQ=255) gggTCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCAtgt < 1:3623945/150‑1 (MQ=255) gggTCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTCCAGGTctggt < 2:2314062/150‑5 (MQ=255) ggTCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCAtgtg < 1:6391725/150‑1 (MQ=255) tCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGAt < 1:6621784/150‑1 (MQ=255) tCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACATGACCTCCAGGTctggt < 2:323530/147‑5 (MQ=37) tCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACATGACCTCCAGGTctggt > 1:323734/1‑143 (MQ=37) tCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACATGACCTCCAGGTCTGGTGAt < 2:6639753/150‑1 (MQ=37) cAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGTCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATa < 2:5613007/150‑1 (MQ=255) aaCCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAACTCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTATCACATGACCTCCAGGTCTGGTGAttc < 2:3670319/150‑3 (MQ=25) ccTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAACTCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑t < 2:5348297/150‑1 (MQ=255) ccTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTATCACATGACCTCCAGGTCTGGTGATTCC‑t < 2:7188591/150‑1 (MQ=25) cTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTTAGGCCTGACATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑tg < 1:7287201/150‑1 (MQ=255) tGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTATCACATGACCTCCAGGTCTGGTGATTCC‑tgt < 1:4097166/150‑1 (MQ=25) tGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTATCACATGACCTCCAGGTCTGGTGATTCC‑tgt < 1:686479/150‑1 (MQ=25) ggCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTATCACATGACCTCCAGGTCTGGTGATTCC‑tgtg < 1:54090/150‑1 (MQ=25) ggCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑tgtg < 2:4375889/150‑1 (MQ=255) ggCGCTGATGGAAGAGCGCTGGCCGGACATCAAGGTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑tgtg < 2:660227/150‑1 (MQ=255) gcgcTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTATCACATGACCTCCAGGTCTGGTGATTCC‑TGTgg < 1:5781241/150‑1 (MQ=25) gcgcTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTgg < 1:551944/150‑1 (MQ=255) gcgcTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCCGCCTAGCGGCCCTTCGCGGGCACGCCCGCTCCCACAGGTATCACATGACCTCCAGGTCTGGTGATTCC‑TGTgg < 1:2323599/150‑1 (MQ=17) ctgcTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTgg < 1:506298/148‑1 (MQ=255) gcTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTATCACATGACCTCCAGGTCTGGTGATTCC‑tgtg > 2:1368853/1‑147 (MQ=25) gcTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGa > 2:6874210/1‑150 (MQ=255) gcTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGa < 2:2339991/150‑1 (MQ=255) tGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGAt > 1:2659866/1‑138 (MQ=255) tGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGc < 1:1378303/150‑1 (MQ=255) gATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACA‑TGTGGGAGCg > 2:1536952/1‑150 (MQ=255) aTGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCgg < 2:4600135/150‑1 (MQ=255) tGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCggg < 1:2447939/150‑1 (MQ=255) ggAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCGCCCACCGGAATCACCCGACCGGGAGGGCCTGGGGTACC‑GGGGGGAGCGGGc > 1:4854649/1‑150 (MQ=38) ggCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGaa < 2:1118352/150‑1 (MQ=255) gCCGGACATAACGTTCGGGGCTACCGGCGACCACCTTTATGGCGTGAATTGGGGGCTGCTTTGCTGCCCCTGGCGGGCACGCCCGCTCCCACAGGAAGCCCCCGACCTGGCGGTAATTTGAGACG‑TGTGGGAGCGTGCGTGCCCGCGAAg < 2:1959154/150‑1 (MQ=255) aTCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTATCACATGACCTCCAGGTCTGGTGATTCC‑tgt < 1:1903032/121‑1 (MQ=18) cgcgCTACCCGCGAGCACCAGTAAGGCCTGACCTCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCGCCCCCCGGAATCACCCGACCGGGAGGGCCTGTGCTACC‑GGGGGGAGCGGGCGTGCCCGCGCAGGGCCGCGAGGCGG‑ccc > 2:3547705/1‑150 (MQ=25) ccGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCGCCCCCCCGAATCACCCGACCTGGAGGTCATGGGATACC‑TGTGGGTGCGGGCGGGCCCCCCAAAGGCCGCGCGGCGG‑CCCC‑CTTTCaa > 2:221823/1‑150 (MQ=37) catccaGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGG‑CCCC‑ATTTCAATTTCCGGCtt < 2:4197808/145‑1 (MQ=255) cATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCAGGAGGTCATGTGCTACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGG‑CCCC‑ATTTCAATTTCCGGCtt > 2:4316465/1‑150 (MQ=255) aTTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGG‑CCCC‑ATTTCAATTTCCGGCttt < 2:4910473/150‑1 (MQ=255) cggCCTGAAAGCGGGGCTGCTTGGCCGCCCTCCGCGGGCCCGCCCGCCCCCCCAGCAATCACCAGCCCGGCCGTTCTTGTGATACC‑TGTGGGTGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGG‑CCCC‑ATTTCAATTTCCGGCTTTGATa < 1:7244084/149‑1 (MQ=25) cTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCTTGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGG‑CCCC‑ATTTCAATTTCCGGCTTTGATACTgg < 2:7128305/150‑1 (MQ=255) aatggggCCGCCTAGCGGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCAtgt > 2:3285709/4‑71 (MQ=11) aatggggCCGCCTAGCGGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCAtgt < 1:3285709/68‑1 (MQ=11) gctTTCCAGCCCTTGGCGGGCCCCCCCCCCCCCACTGTAAAAACCAGACCTGGAGTAATTGTTTAACG‑TGTGGGCGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGG‑CCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTa < 1:3928402/150‑1 (MQ=255) aGCCCTTCGCGGGCACGCCCGCCCCCCCCGTAATCACCAGACCTGGGGTTAATGTCATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGG‑CCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATAc < 1:469681/150‑1 (MQ=38) gCCCTTCGCGGGCACGCCCGCCCCCACAGGAATCACCCGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGG‑CCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACg < 2:326623/150‑1 (MQ=255) ttCGCGGGCACGCCCGCTCCCACACGAAACACCAGAACAGGAGGTCAATTGATACC‑AGTGGGGGCGGGCGTGCCCGCGAAGGGCCGCGATGCGGCCCCC‑AATCCAATTACC‑GCCTTGAAACGTGTCCAGATTCGCGTACCAAAAAGGTCg > 2:2083391/1‑150 (MQ=16) ggCCCGCCCGCACCCACATTAATCACCAGCCCTGTTGGTATTGTTTTACT‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCTG‑CCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATTCGGTCGATCTTc < 1:3534038/150‑1 (MQ=255) cACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGG‑CCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGc < 2:3947374/150‑1 (MQ=255) cccccGCCCCCCCAGGACACACCCGCCCTGGTGGTCATGT‑TTACCGTGTGGGCGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGG‑CCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCg < 1:431912/148‑1 (MQ=255) gCCCGCTCCCACAGGTATCACATGACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGG‑CCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCgg > 1:1260215/1‑150 (MQ=21) gCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGG‑CCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCgg > 2:5124489/1‑150 (MQ=255) gCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGG‑CCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATc < 2:5417896/150‑1 (MQ=255) cgcccACCGCAATCACCACACCTGGCGGTCATGTGATCCC‑TGGGGGCGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGG‑CCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCg < 1:4793760/148‑1 (MQ=255) ccACAGGTATCACATGACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGG‑CCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCt > 2:1874398/1‑150 (MQ=25) ccACAGGTATCACATGACCTCCAGGTCTGGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGG‑CCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATc < 1:67483/134‑1 (MQ=21) cacaGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGCGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGG‑CCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTc < 2:2068275/150‑1 (MQ=255) acaGGTATCACATGACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGG‑CCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTcc > 1:1175760/1‑150 (MQ=25) acaGGTATCACATGACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGG‑CCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTcc > 2:7244136/1‑150 (MQ=25) acaGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGG‑CCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCgccgcc > 1:6861545/1‑150 (MQ=255) acaGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGG‑CCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTcc > 1:764148/1‑150 (MQ=255) acaGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGG‑CCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTcc > 2:596723/1‑150 (MQ=255) caGGTATCACATGACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAG‑CCCCGATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTcc > 1:6866865/1‑150 (MQ=17) caGGAATCACCCGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGG‑CCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCa < 2:1931500/150‑1 (MQ=255) caGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGG‑CCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCCTCGCCTCCa > 1:273843/1‑150 (MQ=255) caGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGG‑CCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCa > 2:1004288/1‑150 (MQ=255) caGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGG‑CCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCa > 1:7145798/1‑150 (MQ=255) caGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGG‑CCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCa > 1:4331214/1‑150 (MQ=255) aGGTATCACATGACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGG‑CCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAg > 2:6619165/1‑150 (MQ=25) aGGTATCACATGACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGG‑CCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGAACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAg > 2:2680149/1‑150 (MQ=25) aGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGG‑CCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAg > 1:225360/1‑150 (MQ=255) aGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGG‑CCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCAGGCATCGCCTCCAg > 2:2906020/1‑150 (MQ=255) gAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGG‑CCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAgcg < 1:6156297/150‑1 (MQ=255) | CCTGACCTACCTGGCGCCGACCCGGGTCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAATCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGG‑CCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCG > NC_002947/1018031‑1018328 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |