| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,018,201 | T→G | 41.4% | intergenic (+77/+54) | prfC → / ← potF‑I | peptide chain release factor 3/putrescine‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,018,201 | 0 | T | G | 41.4% | 142.5 / 272.6 | 197 | intergenic (+77/+54) | prfC/potF‑I | peptide chain release factor 3/putrescine‑binding protein |
| Reads supporting (aligned to +/- strand): ref base T (62/53); new base G (48/33); total (111/86) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.69e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.21e-03 | |||||||||||
Only 100 of 219 total aligned reads displayed.
CCGGGTCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATACAGCTTGCCCATCACCT > NC_002947/1018052‑1018349 | ccGGGTCACCCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGACAT‑‑‑‑‑CGGGGCTGCTTTGCATCCCTTCTCGGGCTCGCCCGCTGCCACCGGAATCACCAGACCTGTAGGTCAt < 2:3779860/150‑1 (MQ=255)ccGGGTCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCAt > 2:4793760/1‑150 (MQ=255)ccGGGTCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCAt < 2:541571/150‑1 (MQ=255) gggTCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCAtgt < 2:2220202/150‑1 (MQ=255) ggTCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCAtgtg < 1:6391725/150‑1 (MQ=255) tCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACATGACCTCCAGGTCTGGTGAt < 2:6639753/150‑1 (MQ=37) aCCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATAcc < 2:4165451/150‑1 (MQ=255) aCCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATAcc > 2:6182550/1‑150 (MQ=255) ccTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAACT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑t < 2:5348297/150‑1 (MQ=255) ccTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTATCACATGACCTCCAGGTCTGGTGATTCC‑t < 2:7188591/150‑1 (MQ=25) cTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTATCACATGACCTCCAGGTCTGGTGATTCC‑tg < 2:310111/150‑1 (MQ=25) tGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTATCACATGACCTCCAGGTCTGGTGATTCC‑tgt < 1:686479/150‑1 (MQ=25) tGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTATCACATGACCTCCAGGTCTGGTGATTCC‑tgt < 1:4097090/150‑1 (MQ=25) gggCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTATCACATGACCTCCAGGTCTGGTGATTCC‑tgt < 2:2165134/149‑1 (MQ=25) ggCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTATCACATGACCTCCAGGTCTGGTGATTCC‑tgtg < 1:4525987/150‑1 (MQ=25) ggCGCTGATGGAAGAGCGCTGGCCGGACATCAAGGTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑tgtg < 2:660227/150‑1 (MQ=255) gcgcTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTATCACATGACCTCCAGGTCTGGTGATTCC‑TGTgg < 1:5315852/150‑1 (MQ=25) gcgcTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTgg < 1:551944/150‑1 (MQ=255) gcgcTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCCGCCTAGCGGCCCTTCGCGGGCACGCCCGCTCCCACAGGTATCACATGACCTCCAGGTCTGGTGATTCC‑TGTgg < 1:2323599/150‑1 (MQ=17) gcTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTATCACATGACCTCCAGGTCTGGTGATTCC‑tgtg < 1:1368853/147‑1 (MQ=25) gcTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGa > 2:6874210/1‑150 (MQ=255) gcTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGa < 2:2339991/150‑1 (MQ=255) tGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGAt < 2:2659866/138‑1 (MQ=255) tGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑GGTGGGAGc > 2:2314800/1‑150 (MQ=255) tGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCGCCCACACGAAACACCACACCGGGAGGGCATGTGATACC‑GGGGGGGGc > 1:3510344/1‑150 (MQ=38) gATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCGGAAATTGAAATGGGGCCGCCTAGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTgg < 2:1693369/150‑1 (MQ=21) ggAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCGCCCACCGGAATCACCCGACCGGGAGGGCCTGGGGTACC‑GGGGGGAGCGGGc > 1:4854649/1‑150 (MQ=38) gCCGGACATAACGTTCGGGGCTACCGGCGACCACCTTTATGGCGTGAATT‑‑‑‑‑GGGGGCTGCTTTGCTGCCCCTGGCGGGCACGCCCGCTCCCACAGGAAGCCCCCGACCTGGCGGTAATTTGAGACG‑TGTGGGAGCGTGCGTGCCCGCGAAg < 2:1959154/150‑1 (MQ=255) aTCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTATCACATGACCTCCAGGTCTGGTGATTCC‑tgt < 1:1903032/121‑1 (MQ=18) aTCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCGCCCACACGAAGCACCACACCGGGAGGGCATGTGGTACC‑GGGGGGGGCGGGCGTGCCCGCGCAGGGccccg > 2:288403/1‑147 (MQ=37) aGCACCATTAAGGCCTGAACT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTcc < 2:6402760/150‑1 (MQ=255) aTTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCttt < 2:4910473/150‑1 (MQ=255) cggCCTGAAAG‑‑‑‑‑CGGGGCTGCTTGGCCGCCCTCCGCGGGCCCGCCCGCCCCCCCAGCAATCACCAGCCCGGCCGTTCTTGTGATACC‑TGTGGGTGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATa < 1:7244084/149‑1 (MQ=25) cTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCTTGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTgg < 2:7128305/150‑1 (MQ=255) tGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCGGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGt > 2:5724456/1‑150 (MQ=255) aatggggCCGCCTAGCGGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCAtgt > 2:3285696/4‑71 (MQ=11) aatggggCCGCCTAGCGGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCAtgt < 1:3285696/68‑1 (MQ=11) gctTTCCAGCCCTTGGCGGGCCCCCCCCCCCCCACTGTAAAAACCAGACCTGGAGTAATTGTTTAACG‑TGTGGGCGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTa < 1:3928402/150‑1 (MQ=255) tttGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACg > 2:7294122/1‑150 (MQ=255) aGCCCTTCGCGGGCACGCCCGCCCCCCCCGTAATCACCAGACCTGGGGTTAATGTCATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATAc < 1:469681/150‑1 (MQ=38) gCCCTTCGCGGGCACGCCCGCCCCCACAGGAATCACCCGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACg < 2:326623/150‑1 (MQ=255) cACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGc < 2:3947374/150‑1 (MQ=255) cccccGCCCCCCCAGGACACACCCGCCCTGGTGGTCATGT‑TTACCGTGTGGGCGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCg < 1:431912/148‑1 (MQ=255) ccGCTCCCACAGGTATCACATGACCTCCAGGTCTGGTGATTCC‑TGTGGGGGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCa > 1:1251914/1‑150 (MQ=21) gCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATc > 2:3654069/1‑150 (MQ=255) cgcccACCGCAATCACCACACCTGGCGGTCATGTGATCCC‑TGGGGGCGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCg < 1:4793760/148‑1 (MQ=255) ccACAGGTATCACATGACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCt > 2:1874398/1‑150 (MQ=25) ccACAGGTATCACATGACCTCCAGGTCTGGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATc < 1:67483/134‑1 (MQ=21) ccACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCt > 1:3864520/1‑150 (MQ=255) ccccggAAACACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTc < 1:547388/146‑1 (MQ=255) cacaGGTATCACATGACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTc > 1:2663926/1‑150 (MQ=25) cacaGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGCGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTc < 2:2068275/150‑1 (MQ=255) acaGGTATCACATGACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCGATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTc > 1:2553489/1‑150 (MQ=17) acaGGTATCACATGACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTcc > 2:5181265/1‑150 (MQ=25) acaGGTATCACATGACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTcc > 1:727072/1‑150 (MQ=25) acaGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCGATTTc > 1:238645/1‑83 (MQ=11) acaGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCgccgcc > 1:6861545/1‑150 (MQ=255) acaGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTcc > 1:764148/1‑150 (MQ=255) acaGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTcc > 2:4501623/1‑150 (MQ=255) acaGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTcc > 2:596723/1‑150 (MQ=255) caGGTATCACATGACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCGATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTcc > 1:6866865/1‑150 (MQ=17) caGGTATCACATGACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCa > 1:60173/1‑150 (MQ=25) caGGAATCACCCGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCa < 2:1931500/150‑1 (MQ=255) aGGTATCACATGACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAg > 2:6619165/1‑150 (MQ=25) aGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGcc > 2:4330325/1‑73 (MQ=17) aGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAg > 2:1281593/1‑150 (MQ=255) aGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAg > 1:225360/1‑150 (MQ=255) ggtaTCACATGACCTCCAGGTCTGGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCg < 1:4066104/123‑1 (MQ=21) ggtaTCACATGACCTCCAGGTCTGGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCg > 2:4066104/4‑126 (MQ=21) ggtaTCACATGACCTCCAGGTCTGGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAgc > 2:5752180/4‑150 (MQ=37) gtaTCACATGACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAgcg > 1:1796960/3‑150 (MQ=25) gtaTCACATGACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACAGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAgcg > 2:10210/3‑150 (MQ=25) taTCACATGACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAgcgc > 1:7057296/2‑150 (MQ=25) aTCACATGACCTCCAGGTCTGGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCa > 2:1560267/1‑150 (MQ=37) tCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATCCTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAgcgcct > 2:4263223/1‑148 (MQ=255) acatgACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCgg > 2:3417168/5‑131 (MQ=21) acatgACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCgg < 1:3417167/127‑1 (MQ=21) aCCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATAc > 1:3220682/1‑150 (MQ=255) aCCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATAc > 2:5509925/1‑150 (MQ=255) aCCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATAc > 2:1119234/1‑150 (MQ=255) aCCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATAc > 2:1461561/1‑150 (MQ=255) ccAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAGTACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATACa > 1:1157009/1‑150 (MQ=255) ccAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATACa > 1:6636709/1‑150 (MQ=255) ccAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATACa > 1:5082675/1‑150 (MQ=255) catgACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCGATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGc < 2:5042003/134‑1 (MQ=17) catgACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCGATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGc > 1:5042003/4‑137 (MQ=17) atgACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATACAg > 1:6141110/3‑150 (MQ=37) atgACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATACAg > 1:5406127/3‑150 (MQ=37) atgACCTCCAGGTCTGGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACgg < 1:176407/113‑1 (MQ=25) atgACCTCCAGGTCTGGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATACAg > 1:5856304/3‑150 (MQ=255) atgACCTCCAGGTCTGGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATACAg > 2:3165960/3‑150 (MQ=255) aCCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCCGCGCATACAGCtt > 2:2780802/1‑150 (MQ=255) aCCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATACAGCtt > 2:7090483/1‑150 (MQ=255) ccTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATACAGCTTg < 1:6182550/150‑1 (MQ=255) tccaGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATACAGCTTGcc > 1:3552704/4‑150 (MQ=255) ggAGGTCATGAGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATACAGCTTGccc < 2:4208497/150‑1 (MQ=255) ccaGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCAAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATACAGCTTGccc > 2:3382998/3‑150 (MQ=255) ggTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATACAGCTTGCCCATc < 1:1004288/150‑1 (MQ=255) gTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATACAGCTTGCCCATCa > 1:78693/1‑150 (MQ=255) aTGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATACAGCTTGCCCATCACCt > 1:954886/1‑150 (MQ=255) | CCGGGTCAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATACAGCTTGCCCATCACCT > NC_002947/1018052‑1018349 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |