| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,018,207 | A→T | 33.1% | intergenic (+83/+48) | prfC → / ← potF‑I | peptide chain release factor 3/putrescine‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,018,207 | 0 | A | T | 33.1% | 253.0 / 200.3 | 197 | intergenic (+83/+48) | prfC/potF‑I | peptide chain release factor 3/putrescine‑binding protein |
| Reads supporting (aligned to +/- strand): ref base A (79/52); new base T (39/26); total (118/79) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.90e-02 | |||||||||||
Only 100 of 198 total aligned reads displayed.
CAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATACAGCTTGCCCATCACCTCGTCGC > NC_002947/1018058‑1018355 | cAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGTCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATa < 2:5613007/150‑1 (MQ=255) aCCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATAcc > 2:6182550/1‑150 (MQ=255) ccTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTATCACATGACCTCCAGGTCTGGTGATTCC‑t < 2:1667517/150‑1 (MQ=25) ccTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCCGCCTAGCGGCCCTTCGCGGGCACGCCCGCTCCCACAGGTATCACATGACCTCCAGGTCTGGTGATTCC‑t < 2:712343/150‑1 (MQ=18) cTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTATCACATGACCTCCAGGTCTGGTGATTCC‑tg < 2:7188149/150‑1 (MQ=25) tGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTATCACATGACCTCCAGGTCTGGTGATTCC‑tgt < 1:4097090/150‑1 (MQ=25) gggCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTATCACATGACCTCCAGGTCTGGTGATTCC‑tgt < 2:2165134/149‑1 (MQ=25) ggCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTATCACATGACCTCCAGGTCTGGTGATTCC‑tgtg < 1:3925968/150‑1 (MQ=25) ggCGCTGATGGAAGAGCGCTGGCCGGACATCAAGGTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑tgtg < 2:660227/150‑1 (MQ=255) gcgcTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTATCACATGACCTCCAGGTCTGGTGATTCC‑TGTgg < 1:5781241/150‑1 (MQ=25) gcgcTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTATCACATGACCTCCAGGTCTGGTGATTCC‑TGTgg < 2:4235069/150‑1 (MQ=25) gcgcTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTATCACATGACCTCCAGGTCTGGTGATTCC‑TGTgg < 1:5315852/150‑1 (MQ=25) gcgcTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTgg < 1:551944/150‑1 (MQ=255) gcgcTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCCGCCTAGCGGCCCTTCGCGGGCACGCCCGCTCCCACAGGTATCACATGACCTCCAGGTCTGGTGATTCC‑TGTgg < 1:2323599/150‑1 (MQ=17) gcTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTATCACATGACCTCCAGGTCTGGTGATTCC‑tgtg < 1:1368853/147‑1 (MQ=25) gcTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTATCACATGACCTCCAGGTCTGGTGATTCC‑tgtg > 2:1368853/1‑147 (MQ=25) gcTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCGGGAGGTCATGTGATACC‑TGGGGGa > 2:6874285/1‑150 (MQ=255) gcTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACATGACCTCCAGGTCTGGTGATTCC‑TGTGGGa < 1:5046825/150‑1 (MQ=25) tGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCGCCCACACGAAACACCACACCGGGAGGGCATGTGATACC‑GGGGGGGGc > 1:3510344/1‑150 (MQ=38) gATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACA‑TGTGGGAGCg > 2:1536952/1‑150 (MQ=255) gATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCGGAAATTGAAATGGGGCCGCCTAGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTgg < 2:1693369/150‑1 (MQ=21) aTGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCgg < 1:5993058/150‑1 (MQ=255) agagCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATGAAGGCCTGAACT‑‑‑‑‑CGGGGCTGCTTGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTg < 2:1126404/150‑1 (MQ=255) ggCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGaa < 2:1118352/150‑1 (MQ=255) gCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCGCCCCCACGAATAACCCCACCGGGTGGTCATGTGGTAAC‑GGGGGGGGCGGGGGGGGCCGCCAAg > 1:4746946/1‑150 (MQ=25) gCCGGACATAACGTTCGGGGCTACCGGCGACCACCTTTATGGCGTGAATT‑‑‑‑‑GGGGGCTGCTTTGCTGCCCCTGGCGGGCACGCCCGCTCCCACAGGAAGCCCCCGACCTGGCGGTAATTTGAGACG‑TGTGGGAGCGTGCGTGCCCGCGAAg < 2:1959154/150‑1 (MQ=255) aTCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCCCAGGAATCACCACACCGGGGGGTCATGTGATACC‑GGTGGGTGCGGGCGTGCCCGCGAAGGGCCGCt > 2:288228/1‑150 (MQ=38) aTCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTATCACATGACCTCCAGGTCTGGTGATTCC‑tgt < 1:1903032/121‑1 (MQ=18) ccGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGcc < 2:6094566/150‑1 (MQ=255) cgcgCTACCCGCGAGCACCAGTAAGGCCTGACCT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCGCCCCCCGGAATCACCCGACCGGGAGGGCCTGTGCTACC‑GGGGGGAGCGGGCGTGCCCGCGCAGGGCCGCGAGGCGGccc > 2:3547705/1‑150 (MQ=25) cTACCCGCGAGCACCATTAGGGCCTTAAAT‑‑‑‑‑CGGGGCTGCTTTGCCGCCCTGCGCGGGCCCCCCCGCTCCCCCCGGAACCCCCCGACCTGGAGTTCATGTTATACC‑TGTGGTCGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑Att < 2:868735/150‑1 (MQ=255) aGCACCATTAAGGCCTGAACT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTcc < 2:6402760/150‑1 (MQ=255) catccaGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCtt < 2:4197808/145‑1 (MQ=255) cATTATGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGTGGTCATGTGATACC‑TGTGGGAGGGGGCGGGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCtt < 1:6118589/150‑1 (MQ=255) cggCCTGAAAG‑‑‑‑‑CGGGGCTGCTTGGCCGCCCTCCGCGGGCCCGCCCGCCCCCCCAGCAATCACCAGCCCGGCCGTTCTTGTGATACC‑TGTGGGTGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATa < 1:7244084/149‑1 (MQ=25) gCACCCCCGCACCCACACGAATCACCACACCTGCAGGTCATGAGAAACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCg < 2:4009557/150‑1 (MQ=38) aCGCCCGCTCCCACCGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGcc < 2:4854649/150‑1 (MQ=255) cccccGCCCCCCCAGGACACACCCGCCCTGGTGGTCATGT‑TTACCGTGTGGGCGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCg < 1:431912/148‑1 (MQ=255) ccGCTCCCACAGGTATCACATGACCTCCAGGTCTGGTGATTCC‑TGTGGGGGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCa > 1:1251914/1‑150 (MQ=21) gCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATc > 1:669781/1‑150 (MQ=255) gCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATc < 2:5417896/150‑1 (MQ=255) ccACAGGTATCACATGACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCt > 2:1874398/1‑150 (MQ=25) ccACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCt > 2:3267049/1‑150 (MQ=255) ccccggAAACACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTc < 1:547388/146‑1 (MQ=255) cacaGGTATCACATGACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTc > 1:2663926/1‑150 (MQ=25) cacaGGACTCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTc < 2:2068276/150‑1 (MQ=255) acaGGTATCACATGACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCGATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTc > 1:2553489/1‑150 (MQ=17) acaGGTATCACATGACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTcc > 1:4802635/1‑150 (MQ=25) acaGGTATCACATGACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTcc > 2:7244136/1‑150 (MQ=25) acaGGTATCACATGACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTcc > 1:727072/1‑150 (MQ=25) acaGGTATCACATGACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTcc > 2:5181265/1‑150 (MQ=25) acaGGTATCACATGACCTCCAGGTCTGGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTcc > 1:966860/1‑150 (MQ=25) acaGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCGATTTc < 2:238645/83‑1 (MQ=11) acaGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCGATTTc > 1:238645/1‑83 (MQ=11) acaGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTcc > 1:6862173/1‑150 (MQ=255) acaGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTcc > 2:3182063/1‑150 (MQ=255) acaGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTcc > 2:4501623/1‑150 (MQ=255) acaGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTcc > 1:764148/1‑150 (MQ=255) caGGTATCACATGACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCGATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTcc > 1:6866835/1‑150 (MQ=17) caGGAATCACCCGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCa < 2:1931500/150‑1 (MQ=255) caGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCa > 1:6917647/1‑150 (MQ=255) caGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCa > 1:4331214/1‑150 (MQ=255) caGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCa > 1:7145798/1‑150 (MQ=255) aGGTATCACATGACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAg > 1:4590783/1‑150 (MQ=21) aGGTATCACATGACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAg > 2:6619165/1‑150 (MQ=25) aGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGcc > 2:4330325/1‑73 (MQ=17) aGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAg > 1:225360/1‑150 (MQ=255) aGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCAGGCATCGCCTCCAg > 2:2906020/1‑150 (MQ=255) ggtaTCACATGACCTCCAGGTCTGGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCg > 2:4066104/4‑126 (MQ=21) ggtaTCACATGACCTCCAGGTCTGGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCg < 1:4066104/123‑1 (MQ=21) ggtaTCACATGACCTCCAGGTCTGGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAgc > 2:5752180/4‑150 (MQ=37) ggAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAgc < 2:3886022/150‑1 (MQ=255) gtaTCACATGACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAgcg > 2:680128/3‑150 (MQ=25) gtaTCACATGACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAgcg > 1:1796960/3‑150 (MQ=25) gtaTCACATGACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACAGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAgcg > 2:10210/3‑150 (MQ=25) gAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAgcg < 1:6156297/150‑1 (MQ=255) tCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATCCTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAgcgcct > 2:4263223/1‑148 (MQ=255) cACCAGACCTGGAGGTCATGTGATACC‑TGTGGGCGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATa < 1:4865052/150‑1 (MQ=255) acatgACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCgg > 2:3417167/5‑131 (MQ=21) acatgACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCgg < 1:3417167/127‑1 (MQ=21) ccAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAGTACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATACa > 1:1157009/1‑150 (MQ=255) ccAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATACa > 1:6784814/1‑150 (MQ=255) ccAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATACa > 1:5082675/1‑150 (MQ=255) catgACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCGATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGc < 2:5042003/134‑1 (MQ=17) atgACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATACAg > 1:6486249/3‑150 (MQ=37) atgACCTCCAGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATACAg > 1:5406127/3‑150 (MQ=37) atgACCTCCAGGTCTGGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACgg < 1:176407/113‑1 (MQ=25) aCCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCCGCGCATACAGCtt > 2:2780802/1‑150 (MQ=255) aCCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATACAGCtt > 2:2309161/1‑150 (MQ=255) tccaGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATACAGCTTGcc > 1:3552704/4‑150 (MQ=255) ccaGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATACAGCTTGccc > 1:3222507/3‑150 (MQ=25) ccaGGTCTGGTGATTCC‑TGTGGGAGCGGGCGTGCCCGCAAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATACAGCTTGccc > 2:3382998/3‑150 (MQ=255) ggTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATACAGCTTGCCCATc < 1:1004288/150‑1 (MQ=255) gTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATACAGCTTGCCCATCa > 1:78693/1‑150 (MQ=255) gTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATACAGCTTGCCCATCa > 2:2320599/1‑150 (MQ=255) aTGTGATACC‑TGTGGGAGCGGGCGTGACCGCGAAGGGCCGCTAGGCGGCACC‑ATTACAATTTCCGGCTTTGATACTGGTCCAGATACGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATACAGCTTGCCCATCACCt > 2:310536/1‑150 (MQ=255) tgATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATACAGCTTGCCCCTCACCtcgg > 2:4334970/1‑149 (MQ=255) tgATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATACAGCTTGCCCATCACCtcgt > 1:6283134/1‑150 (MQ=255) tgATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATACAGCTTGCCCATCACCtcgt > 1:3092078/1‑150 (MQ=255) tgATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATACAGCTTGCCCATCACCtcgt > 1:1067161/1‑150 (MQ=255) | CAACCTGGCGCTGATGGAAGAGCGCTGGCCGGACATCAAGTTCCGCGCTACCCGCGAGCACCATTAAGGCCTGAAAT‑‑‑‑‑CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATCACCAGACCTGGAGGTCATGTGATACC‑TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCTAGGCGGCCCC‑ATTTCAATTTCCGGCTTTGATACTGGTCCAGATTCGCGTACGAATACGGTCGATCTTCGCCGGCATCGCCTCCAGCGCATACAGCTTGCCCATCACCTCGTCGC > NC_002947/1018058‑1018355 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |