BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	1,036,871	T→A	5.1%	L5M (TTG→ATG) ‡	PP_0889 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	1,036,871	0	T	A	5.1%	1277.9 / 38.1	371	L5M (TTG→ATG) ‡	PP_0889	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (144/207); new base A (7/12); total (151/220)
Fisher's exact test for biased strand distribution p-value = 8.13e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.32e-01

Only 100 of 385 total aligned reads displayed.

GCAATATCTCGGCCACCGCACGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCGCAGTGGCAGAACGACCCTGCCACCCTCGACTGGCAG  >  NC_002947/1036722‑1037020

gCAATATCTCGGCCACCGCACGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCt                                                                                                                                                       >  1:2790515/1‑150 (MQ=255)

  aaTATCTCGGCCACCGCACGGGCGCTGGGCATGCACCGACGGACGTTGCCGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTCATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGACTCCGCTCCTGCTACTGAGAGCGCGGGCTTg                                                                                                                                                     >  1:204154/1‑150 (MQ=255)

  aaTATCTCGGCCACCGCACGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTg                                                                                                                                                     >  1:392039/1‑150 (MQ=255)

    tatCTCGGCCACCGCACGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGcc                                                                                                                                                   <  2:7327016/150‑1 (MQ=255)

     atCTCGGCCACCGCACGGGCGCTGGGCTTGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGccc                                                                                                                                                  <  1:332451/150‑1 (MQ=255)

     atCTCGGCCACCGCACGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGccc                                                                                                                                                  <  2:5294599/150‑1 (MQ=255)

      tctcGGCCACCGCACGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCcg                                                                                                                                                 >  1:4431819/1‑150 (MQ=255)

      tctcGGCCACCGCACGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCcg                                                                                                                                                 >  1:3893641/1‑150 (MQ=255)

       ctcGGCCACCGCACGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCAAGCCcgc                                                                                                                                                <  1:3050722/150‑1 (MQ=255)

        tcGGCCACCGCACGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCcgcg                                                                                                                                               >  2:3950352/1‑150 (MQ=255)

        tcGGCCACCGCACGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCcgcg                                                                                                                                               >  1:1721187/1‑150 (MQ=255)

        tcGGCCACCGCACGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCAAGCCcgcg                                                                                                                                               <  2:1769597/150‑1 (MQ=255)

         cGGCCACCGCACGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCATAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCAAGCCcgcgc                                                                                                                                              <  1:4054151/150‑2 (MQ=255)

         cGGCCACCGCACGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCAAGCCcgcgc                                                                                                                                              <  1:941366/150‑2 (MQ=255)

          ggCCACCGCACGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGaa                                                                                                                                             <  1:6786681/150‑1 (MQ=255)

            ccAGCGCCCGTGCGGTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAgg                                                                                                                                           >  1:4690757/1‑150 (MQ=255)

             cACCGCACGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAggg                                                                                                                                          <  2:1512118/150‑1 (MQ=255)

               ccGCACGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCt                                                                                                                                        <  2:4812629/150‑1 (MQ=255)

                cGCACGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTg                                                                                                                                       >  2:416654/1‑150 (MQ=255)

                cGCACGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTg                                                                                                                                       <  1:693747/150‑1 (MQ=255)

                   aCGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCaa                                                                                                                                    <  2:5948889/150‑1 (MQ=255)

                     gggCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAg                                                                                                                                  >  2:5856764/1‑150 (MQ=255)

                       gcgcTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCa                                                                                                                                >  2:5433029/1‑150 (MQ=255)

                       gcgcTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCa                                                                                                                                <  1:1038386/150‑1 (MQ=255)

                        cgcTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAg                                                                                                                               >  1:6838669/1‑150 (MQ=255)

                         gcTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGt                                                                                                                              >  2:169813/1‑150 (MQ=255)

                             ggCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCa                                                                                                                          <  2:2226512/150‑1 (MQ=255)

                                  gCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCAAAGGGCTGCAAAGCAGTCCCAATCaa                                                                                                                     <  1:6108722/150‑1 (MQ=255)

                                   cACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAg                                                                                                                    <  1:5791418/150‑1 (MQ=255)

                                   cACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGAGTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAg                                                                                                                    <  2:6775730/150‑1 (MQ=255)

                                    aCCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAgg                                                                                                                   >  1:541030/1‑150 (MQ=255)

                                       gacggacgTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGa                                                                                                                >  1:3526094/1‑150 (MQ=255)

                                            acgTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCg                                                                                                           >  2:2474862/1‑150 (MQ=255)

                                             cgTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGa                                                                                                          <  2:3173145/150‑1 (MQ=255)

                                              attGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGAt                                                                                                         <  2:5733997/149‑1 (MQ=255)

                                                tGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGa                                                                                                       <  1:189498/150‑1 (MQ=255)

                                                 gCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGaa                                                                                                      >  2:2907793/1‑150 (MQ=255)

                                                  cAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAg                                                                                                     <  2:512128/150‑1 (MQ=255)

                                                  cAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAg                                                                                                     <  1:6240794/150‑1 (MQ=255)

                                                  cAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAg                                                                                                     <  1:964063/150‑1 (MQ=255)

                                                  cAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAg                                                                                                     <  1:3665215/150‑1 (MQ=255)

                                                    gcgcAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGt                                                                                                   >  1:5889577/1‑150 (MQ=255)

                                                    gcgcAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGt                                                                                                   >  2:283468/1‑150 (MQ=255)

                                                     cgcAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTa                                                                                                  >  1:7103656/1‑150 (MQ=255)

                                                        aaGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTg                                                                                               <  2:7047420/150‑1 (MQ=255)

                                                        aaGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTg                                                                                               >  2:2108623/1‑150 (MQ=255)

                                                          gCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGtt                                                                                             <  2:4660725/150‑1 (MQ=255)

                                                           cTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTg                                                                                            <  2:6860757/150‑1 (MQ=255)

                                                           cTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTg                                                                                            <  1:312926/150‑1 (MQ=255)

                                                           cTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTg                                                                                            <  1:6736056/150‑1 (MQ=255)

                                                           cTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTg                                                                                            <  1:5216391/150‑1 (MQ=255)

                                                              cAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGaa                                                                                                                                             <  2:6422440/98‑1 (MQ=255)

                                                                 aaGCGGCCGGTTCGGCGCTGATTCCTTATCGAGGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCACGGCGAGCTCGCTGAAGGTACTGTTGGTCATc                                                                                      >  2:4042168/1‑150 (MQ=255)

                                                                   gCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCt                                                                                    >  1:7170117/1‑150 (MQ=255)

                                                                   gCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCt                                                                                    >  1:2234828/1‑150 (MQ=255)

                                                                       ccGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTgcg                                                                                >  1:4864514/1‑150 (MQ=255)

                                                                          gTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTg                                                                             >  1:451525/1‑150 (MQ=255)

                                                                           ttCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTgg                                                                            <  2:6014183/150‑1 (MQ=255)

                                                                                cgcTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCa                                                                       >  2:1213588/1‑150 (MQ=255)

                                                                                cgcTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCa                                                                       <  1:6991195/150‑1 (MQ=255)

                                                                                 gcTGATTCCTTTTCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAg                                                                      <  1:2929219/150‑1 (MQ=255)

                                                                                    gATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTa                                                                   <  2:2723232/150‑1 (MQ=255)

                                                                                      ttCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAgc                                                                 >  2:7237373/1‑150 (MQ=255)

                                                                                      ttCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAgc                                                                 <  1:1384574/150‑1 (MQ=255)

                                                                                       tCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAgcg                                                                >  1:2476241/1‑150 (MQ=255)

                                                                                       tCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAgcg                                                                >  1:6364117/1‑150 (MQ=255)

                                                                                        ccTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAgcgc                                                               <  1:7240129/150‑1 (MQ=255)

                                                                                          ttATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCa                                                             >  2:407693/1‑150 (MQ=255)

                                                                                               gatgatGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCt                                                        >  2:431108/1‑150 (MQ=255)

                                                                                               gatgatGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCt                                                        <  2:766231/150‑1 (MQ=255)

                                                                                                 tgatgTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGa                                                      <  1:5636004/150‑1 (MQ=255)

                                                                                                  gatgTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGaa                                                     <  1:4494913/150‑1 (MQ=255)

                                                                                                  gatgTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGaa                                                     <  1:4414132/150‑1 (MQ=255)

                                                                                                  gatgTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGaa                                                     <  2:1995499/150‑1 (MQ=255)

                                                                                                    tgTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGa                                                   >  2:5525188/1‑150 (MQ=255)

                                                                                                      ttGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACt                                                 <  2:2210947/150‑1 (MQ=255)

                                                                                                       tGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTg                                                <  2:3406353/150‑1 (MQ=255)

                                                                                                            tGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTg                                           <  2:5208824/150‑1 (MQ=255)

                                                                                                                cgcgGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGAccc                                       <  2:6918403/150‑1 (MQ=255)

                                                                                                                 gcgGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCg                                      >  1:2583693/1‑150 (MQ=255)

                                                                                                                     gggAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCGCAGt                                  <  1:3798854/150‑1 (MQ=255)

                                                                                                                     gggAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCGCAGt                                  <  1:5495419/150‑1 (MQ=255)

                                                                                                                      ggAATCCGCTACTGCAACTGTGAGCGCGGTCTTGCCAGCTAAGGGCTGCAAATAAGTCCCATTCAAGGCGTGCTCGATGAAGGTACTGTTGTTCATCCTTGCGCTGGTTGAAGTTAGGGGCAAATCTGATGACTGTCCTGTCGCGGAGTg                                 <  2:1296553/150‑1 (MQ=255)

                                                                                                                        aaTCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCGCAGTGGc                               <  1:1620933/150‑1 (MQ=255)

                                                                                                                            cGCTCCTGCAACTGTGAACGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAg                                                                  >  1:1288885/1‑111 (MQ=255)

                                                                                                                             gCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCaaa                                                           >  2:4920433/1‑117 (MQ=255)

                                                                                                                             gCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCaaa                                                           <  1:4920433/117‑1 (MQ=255)

                                                                                                                             gCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCGCAGTGGCAGAAc                          >  2:3879002/1‑150 (MQ=255)

                                                                                                                             gCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCGCAGTGGCAGAAc                          >  1:6621420/1‑150 (MQ=255)

                                                                                                                                 cTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCGCAGTGGCAGAACGAcc                      >  2:4578835/1‑150 (MQ=255)

                                                                                                                                  tGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCGCAGTGGCAGAACGAccc                     >  2:3701230/1‑150 (MQ=255)

                                                                                                                                   gCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCGCAGTGGCAGAACGACCCt                    >  1:3434982/1‑150 (MQ=255)

                                                                                                                                         gtgAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCaaa                                                           >  2:4250931/1‑105 (MQ=255)

                                                                                                                                         cccttcgcgGGCAAGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCaaa                                                           >  1:4325055/6‑105 (MQ=38)

                                                                                                                                          tgAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCGCAGTGGCAGAACGACCCTGCCAccc             >  2:4418591/1‑150 (MQ=255)

                                                                                                                                            ttcgcgGGCAAGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCGCAGTGGCAGAACGACCCTGCCACCCTc           >  1:3249837/3‑150 (MQ=255)

                                                                                                                                            aGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCGCAGTGGCAGAACGACCCTGCCACCCTc           <  2:1847205/150‑1 (MQ=255)

                                                                                                                                             gcgcGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCGCAGTGGCAGAACGACCCTGCCACCCTCg          >  1:4607958/1‑150 (MQ=255)

                                                                                                                                              cgcgGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCGCAGTGGCAGAACGACCCTGCCACCCTCGa         >  2:2354450/1‑150 (MQ=255)

                                                                                                                                                cgGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCGCAGTGGCAGAACGACCCTGCCACCCTCGACt       <  1:117936/150‑1 (MQ=255)

GCAATATCTCGGCCACCGCACGGGCGCTGGGCATGCACCGACGGACGTTGCAGCGCAAGCTGCAGAAGCGGCCGGTTCGGCGCTGATTCCTTATCGATGATGTTGGCCTGTTCGCGGGGGAATCCGCTCCTGCAACTGTGAGCGCGGGCTTGCCCGCGAAGGGCTGCAAAGCAGTCCCAATCAAGGCGAGCTCGATGAAGGTACTGTTGGTCATCCTTGCGCTGGTTGCAGGTAGCGCCAAAGCTGAAGACTGGCCTGACCCGCAGTGGCAGAACGACCCTGCCACCCTCGACTGGCAG  >  NC_002947/1036722‑1037020

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`