Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,189,516 A→T 6.0% intergenic (‑177/‑235) mltF ← / → purL membrane‑bound lytic murein transglycosylase F/phosphoribosylformylglycinamidine synthase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,189,5160AT 6.0% 549.3 / 18.4 166intergenic (‑177/‑235)mltF/purLmembrane‑bound lytic murein transglycosylase F/phosphoribosylformylglycinamidine synthase
Reads supporting (aligned to +/- strand):  ref base A (58/95);  new base T (2/8);  total (60/106)
Fisher's exact test for biased strand distribution p-value = 3.27e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.09e-01

Only 100 of 170 total aligned reads displayed.

CCAACCATATCTCGACAACGGTTAGCTTGTCTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCAGAATGTGTCGAGCCGGACACCTGCGGCGCTCGATCTCGTCTCAAGCCGGACACCTCTGAAAACTGACCCCGAAGTCCGGTTCCGCCGCCCGGCAGGCG  >  NC_002947/1189367‑1189665
                                                                                                                                                     |                                                                                                                                                     
ccAACCATATCTCGACAACGGTTAGCTTGTCTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCa                                                                                                                                                       <  2:3883863/150‑1 (MQ=255)
  aaCCATATCTCGACAACGGTTAGCTTGTCTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAgc                                                                                                                                                     <  2:4705338/150‑1 (MQ=255)
  aaCCATATCTCGACAACGGTTAGCTTGTCTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAgc                                                                                                                                                     <  1:6901284/150‑1 (MQ=255)
    ccATATCTCGACAACGGTTAGCTTGTCTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAgcgc                                                                                                                                                   >  1:2783707/1‑150 (MQ=255)
       tatCTCGACAACGGTTAGCTTGTCTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTa                                                                                                                                                <  1:208862/150‑1 (MQ=255)
        atCTCGACAACGGTTAGCTTGTCTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTAt                                                                                                                                               <  1:7222516/150‑1 (MQ=255)
         tctcGACAACGGTTAGCTTGTCTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATg                                                                                                                                              <  1:1017672/150‑1 (MQ=255)
         tctcGACAACGGTTAGCTTGTCTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATg                                                                                                                                              <  1:1017590/150‑1 (MQ=255)
         tctcGACAACGGTTAGCTTGTCTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATg                                                                                                                                              <  1:178201/150‑1 (MQ=255)
         tctcGACAACGGTTAGCTTGTCTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATg                                                                                                                                              <  1:2070011/150‑1 (MQ=255)
          ctcGACAACGGTTAGCTTGTCTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATga                                                                                                                                             <  2:3236555/150‑1 (MQ=255)
           tcGACAACGGTTAGCTTGTCTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATgag                                                                                                                                            <  1:5885111/150‑1 (MQ=255)
           tcGACAACGGTTAGCTTGTCTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATgag                                                                                                                                            >  1:7228063/1‑150 (MQ=255)
           tcGACAACGGTTAGCTTGTCTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATgag                                                                                                                                            >  1:3491625/1‑150 (MQ=255)
           tcGACAACGGTTAGCTTGTCTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATgag                                                                                                                                            >  1:2131234/1‑150 (MQ=255)
            cGACAACGGTTAGCTTGTCTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATgaga                                                                                                                                           <  1:6113461/150‑1 (MQ=255)
              aCATCGGTTAGCTTGTCTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATc                                                                                                                                         <  2:6870581/150‑1 (MQ=255)
              aCAACGGTTAGCTTGTCTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATc                                                                                                                                         <  2:3832875/150‑1 (MQ=255)
              aCAACGGTTAGCTTGTCTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATc                                                                                                                                         <  1:6100139/150‑1 (MQ=255)
               cAACGGTTAGCTTGTCTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGAGCg                                                                                                                                        >  1:4091106/1‑150 (MQ=255)
                aaCGGTTAGCTTGTCTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGa                                                                                                                                       <  2:3964687/150‑1 (MQ=255)
                aaCGGTTAGCTTGTCTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGa                                                                                                                                       <  1:1348233/150‑1 (MQ=255)
                aaCGGTTAGCTTGTCTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGa                                                                                                                                       <  1:4128687/150‑1 (MQ=255)
                aaCGGTTAGCTTGTCTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGa                                                                                                                                       >  1:365005/1‑150 (MQ=255)
                  cGGTTAGCTTGTCTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAgc                                                                                                                                     <  1:5155298/150‑1 (MQ=255)
                  cGGTTAGCTTGTCTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAgc                                                                                                                                     <  2:2323057/150‑1 (MQ=255)
                   ggTTAGCTTGTCTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAgcg                                                                                                                                    >  1:6449572/1‑150 (MQ=255)
                   ggTTAGCTTGTCTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAgcg                                                                                                                                    >  2:438129/1‑150 (MQ=255)
                    gTTAGCTTGTCTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCAGGTGTCCGGCTCGACACATTCTGCGCCTGTGAGATCGAGcgcc                                                                                                                                  <  1:3404344/150‑1 (MQ=25)
                     ttAGCTTGTCTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCAGGTGTCCGGCTCGACACATTCTGCGCCTGTGAGATCGAGcgccg                                                                                                                                 >  1:2597563/1‑150 (MQ=25)
                       aGCTTGTCTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGcgccgc                                                                                                                                >  2:6057170/1‑150 (MQ=255)
                        gCTTGTCTGGGAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCcgcg                                                                                                                               <  1:1336977/150‑1 (MQ=255)
                          ttGTCTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTGTGAGATCGAGCGCcgcccg                                                                                                                             >  2:3131592/1‑150 (MQ=255)
                           tGTCTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCgcgg                                                                                                                            <  1:1938595/150‑1 (MQ=255)
                           tGTCTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCgcgg                                                                                                                            >  2:3001071/1‑150 (MQ=255)
                            gTCTGGTAGCGGGTTGTGTGGTGGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCgcggg                                                                                                                           <  2:1076626/150‑1 (MQ=255)
                              cTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCgcgggcg                                                                                                                         <  2:7228063/150‑1 (MQ=255)
                              cTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCgcgggcg                                                                                                                         <  1:825390/150‑1 (MQ=255)
                              cTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCgcgggcg                                                                                                                         <  2:3491625/150‑1 (MQ=255)
                              cTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCgcgggcg                                                                                                                         <  1:4574472/150‑1 (MQ=255)
                               tGGTAGCGGGTTGTGTGGCTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCgcgggcgg                                                                                                                        <  2:4820915/150‑1 (MQ=255)
                                  tAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGgcgc                                                                                                                     <  1:2613269/150‑1 (MQ=255)
                                  tAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCAGGTGTCCGGCTCGACACATTCTGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCt                                                                                                                    <  2:476163/150‑1 (MQ=18)
                                   aGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCt                                                                                                                    <  1:1230335/150‑1 (MQ=255)
                                     ggggTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCg                                                                                                                  <  1:3955110/149‑1 (MQ=255)
                                      gggTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGa                                                                                                                 <  2:5157482/150‑1 (MQ=255)
                                      gggTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTAAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGa                                                                                                                 <  2:2489528/150‑1 (MQ=255)
                                       ggTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCCGGTGTCCGCCTTAAGATCTTCCGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTCGAt                                                                                                                <  2:3381169/150‑1 (MQ=37)
                                       ggTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGAt                                                                                                                <  1:6238287/150‑1 (MQ=255)
                                        gTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGAtc                                                                                                               >  2:5206906/1‑150 (MQ=255)
                                        gTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGAtc                                                                                                               <  2:6839211/150‑1 (MQ=255)
                                           gtgtgGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTca                                                                                                            >  1:5964828/1‑150 (MQ=255)
                                           gtgtgGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCAAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTca                                                                                                            <  1:6750612/150‑1 (MQ=255)
                                              tgGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAg                                                                                                         >  1:6436862/1‑150 (MQ=255)
                                              tgGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAg                                                                                                         <  1:6400301/150‑1 (MQ=255)
                                               ggTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGAGATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAgg                                                                                                        <  2:3335697/150‑1 (MQ=255)
                                                gTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGgc                                                                                                       >  1:5578395/1‑150 (MQ=255)
                                                 ttGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGgcg                                                                                                      >  1:320605/1‑150 (MQ=255)
                                                  tGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGgcgc                                                                                                     <  2:137446/150‑1 (MQ=255)
                                                   gggggAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGAGCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCa                                                                                                    <  1:3524712/150‑1 (MQ=255)
                                                      ggtggggggTTTGCATCCGGGCTGCCTGGGGGCCGGCTTGTGATATTCAGCGCCGGTGAGATCGAGCGCCGCCAGGGGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCAGaa                                                                                                 <  1:5063289/147‑1 (MQ=25)
                                                       gAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACCGGCGCAGAAt                                                                                                >  1:4886865/1‑150 (MQ=255)
                                                       gAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGATTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCAGAAt                                                                                                <  1:6243375/150‑1 (MQ=255)
                                                         ggggggATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCAGAAtgt                                                                                              <  2:2817044/150‑1 (MQ=255)
                                                          gggggATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCAGACtgtg                                                                                             >  1:5422995/1‑150 (MQ=255)
                                                          gggggATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCAGGTGTCCGGCTCGACACATTCTGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCATAGGCGCTGAAtatct                                                                                            >  1:7016605/1‑146 (MQ=11)
                                                              gATTGCATCAGGGCTGCCTGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGTTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACCGGCGCAGAATGTGTCGa                                                                                         <  2:7056885/150‑1 (MQ=255)
                                                                  gCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCAGAATGTGTCGAGCCg                                                                                     <  2:1089514/150‑1 (MQ=255)
                                                                   cATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCAGAATGTGTCGAGCCgg                                                                                    <  2:6143683/150‑1 (MQ=255)
                                                                    aTCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTTCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCAGAATGTGTCGAGCCGGa                                                                                   <  1:6792112/150‑1 (MQ=255)
                                                                    aTCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCAGAATGTGTCGAGCCGGa                                                                                   >  2:492701/1‑150 (MQ=255)
                                                                       aGGGCTGCCAGGTGGCCGCCTTGAGATATTCAGCGCCTGTGAGATCGTGCGCCGCCCGGTGTCCGCCTTAAGATAGACAGCGCCTATGAGATCGAGCGCCGCGCGCGCGGCGCTCGATATCACAGGCGCAGAATGTGTCGAGCCGGacag                                                                                >  2:6926280/1‑149 (MQ=38)
                                                                          gCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCAGAATGTGTCGAGCCGGACACCTg                                                                             >  1:275305/1‑150 (MQ=255)
                                                                                   tGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCAGAATGTGTCGAGCCGGACACCTGCGGCGCTCg                                                                    <  2:319399/150‑1 (MQ=255)
                                                                                    ggCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGCTCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCAGAATGTGTCGAGCCGGACACCTGCGGCGCTCGa                                                                   <  2:3050521/150‑1 (MQ=255)
                                                                                           ttGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCTGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCAGAATGTGTCGAGCCGGACACCTGCGGCGCTCGATCTCGtc                                                            <  1:277764/150‑1 (MQ=255)
                                                                                               gaTATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCAGAATGTGTCGAGCCGGACACCTGCGGCGCTCGATCTCGTCTCaa                                                        <  1:3001071/150‑1 (MQ=255)
                                                                                                atatTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCAGAATGTGTCGAGCCGGACACCTGCGGCGCTCGATCTCGTCTCAAg                                                       >  2:7061515/1‑150 (MQ=255)
                                                                                                   ttCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCAGAATGTGTCGAGCCGGACACCTGCGGCGCTCGATCTCGTCTCAAGCCg                                                    >  2:889904/1‑150 (MQ=255)
                                                                                                   ttCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCAGAATGTGTCGAGCCGGACACCTGCGGCGCTCGATCTCGTCTCAAGCCg                                                    >  2:1349961/1‑150 (MQ=255)
                                                                                                          ccTGTGAGATCGAGCGCCGCCAGGTGACCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCAGAATGTGTCGAGCCGGACACCTGCGGCGCTCGATCTCGTCTCAAGCCGGACACct                                             <  1:1555835/150‑1 (MQ=255)
                                                                                                            tgtgAGATGGAGCGCCGCCTGGTGTCCGCCTTAAGATATTCCGCGCCTTTGAGAGGGCGCGCCGCGCGGGCGGCGCTCGATCGCACCGGCGCAGAATGTGTCGAGCCGGACACCTGCGGCGCTCGATCTCGTCTCAAGCCGGACACctct                                           <  1:2529954/150‑1 (MQ=38)
                                                                                                             gtgAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCAGAATGTGTCGAGCCGGACACCTGCGGCGCTCGATCTCGTCTCAAGCCGGACACCTCTg                                          >  1:5097082/1‑150 (MQ=255)
                                                                                                                 gaTCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCAGAATGTGTCGAGCCGGACACCTGCGGCGCTCGATCTCGTCTCAAGCCGGACACCTCTGaaaa                                      <  1:4286049/150‑1 (MQ=255)
                                                                                                                      aGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCAGAATGTGTCGAGCCGGACACCTGCGGCGCTCGATCTCGTCTCAAGCCGGACACCTCTGAAAACTGAc                                 >  1:5555610/1‑150 (MQ=255)
                                                                                                                          ccgccAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCAGAATGTGTCGAGCCGGACACCTGCGGCGCTCGATCTCGTCTCAAGCCGGACACCTCTGAAAACTGACCCCg                             >  2:5189471/1‑150 (MQ=255)
                                                                                                                            gccAGGTTTCCGCCTTAATATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCAGAATGTGTCGAGCCGGACACCTGCGGCGCTCGATCTCGTCTCAAGCCGGACACCTCTGAAAACTGACCCCGaa                           <  1:5783914/150‑1 (MQ=255)
                                                                                                                            gccAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCAGAATGTGTCGAGCCGGACACCTGCGGCGCTCGATCTCGTCTCAAGCCGGACACCTCTGAAAACTGACCCCGaa                           >  1:6893627/1‑150 (MQ=255)
                                                                                                                            gccAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCAGAATGTGTCGAGCCGGACACCTGCGGCGCTCGATCTCGTCTCAAGCCGGACACCTCTGAAAACTGACCCCGaa                           <  2:5711324/150‑1 (MQ=255)
                                                                                                                            gccAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCAGAATGTGTCGAGCCGGACACCTGCGGCGCTCGATCTCGTCTCAAGCCGGACACCTCTGAAAACTGACCCCGaa                           >  1:337695/1‑150 (MQ=255)
                                                                                                                               aGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCAGAATGTGTCGAGCCGGACACCTGCGGCGCTCGATCTCGTCTCAAGCCGGACACCTCTGAAAACTGACCCCGAAGTc                        >  2:1130191/1‑150 (MQ=255)
                                                                                                                                    tCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCAGAATGTGTCGAGCCGGACACCGGCGGCGCTCGAt                                                                  <  2:1675896/103‑1 (MQ=255)
                                                                                                                                    tCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCAGAATGTGTCGAGCCGGACACCGGCGGCGCTCGAt                                                                  >  1:1675896/1‑103 (MQ=255)
                                                                                                                                        ccTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCAGAATGTGTCGAGCCGGACACCTGCGGCGCTCGATCTCGTCTCAAGCCGGACACCTCTGAAAACTGACCCCGAAGTCCGGTTccgc               >  2:6633332/1‑150 (MQ=255)
                                                                                                                                         ctcgacatatTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCAGAATGTGTCGAGCCGGACACCTGCGGCGCTCGATCTCGTCTCAAGCCGGACACCTCTGAAAACTGACCCCGAAGTCCGGTTccgcc              >  2:245854/7‑150 (MQ=255)
                                                                                                                                         cTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCAGAATGTGTCGAGCCGGACACCTGCGGCGCTCGATCTCGTCTCAAGCCGGACACCTCTGAAAACTGACCCCGAAGTCCGGTTccgcc              <  2:5555610/150‑1 (MQ=255)
                                                                                                                                            aaGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCAGAATGTGTCGAGCCGGACACCTGCGGCGCTCGATCTCGTCTCAAGCCGGACACCTCTGAAAACTGACCCCGAAGTCCGGTTc                  <  2:580118/143‑1 (MQ=255)
                                                                                                                                             aGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCAGAATGTGTCGAGCCGGACACCTGCGGCGCTCGATCTCGTCTCAAGCCGGACACCTCTGAAAACTGACCCCGAAGTCCGGTTCCGCCGccc          >  2:1251327/1‑150 (MQ=255)
                                                                                                                                              gATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCAGAATGTGTCGAGCCGGACACCTGCGGCGCTCGATCTCGTCTCAAGCCGGACACCTCTGAAAACTGACCCCGAAGTCCGGTTCCGCCGCCCg         >  1:4855601/1‑150 (MQ=255)
                                                                                                                                              gATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCAGAATGTGTCGAGCCGGACACCTGCGGCGCTCGATCTCGTCTCAAGCCGGACACCTCTGAAAACTGACCCCGAAGTCCGGTTCCGCCGCCCg         <  2:2783707/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CCAACCATATCTCGACAACGGTTAGCTTGTCTGGTAGCGGGTTGTGTGGTTGGGGGAGGGGGGATTGCATCAGGGCTGCCAGGTGGCCGGCTTGAGATATTCAGCGCCTGTGAGATCGAGCGCCGCCAGGTGTCCGCCTTAAGATATTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCAGAATGTGTCGAGCCGGACACCTGCGGCGCTCGATCTCGTCTCAAGCCGGACACCTCTGAAAACTGACCCCGAAGTCCGGTTCCGCCGCCCGGCAGGCG  >  NC_002947/1189367‑1189665

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: