| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,248,697 | T→A | 5.7% | intergenic (+31/+68) | tsaA → / ← rnt | peroxiredoxin/ribonuclease T |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,248,697 | 0 | T | A | 5.7% | 1194.5 / 37.1 | 358 | intergenic (+31/+68) | tsaA/rnt | peroxiredoxin/ribonuclease T |
| Reads supporting (aligned to +/- strand): ref base T (163/173); new base A (7/14); total (170/188) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.60e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 362 total aligned reads displayed.
AGTTCCACGAAGAGCACGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCAGAACAGCTCAGCGGTTTTCTCGGTG > NC_002947/1248548‑1248846 | aGTTACACGAAGAGCACGGCGAAGTGTGCCATGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGATGCTGCCTACCTGAGAGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGTCCTTCGt > 2:2283805/1‑150 (MQ=255) gTTCCACGAAGAGCACGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTg > 2:3028964/1‑150 (MQ=255) ccACGAAGAGCACGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGcc < 1:1190372/150‑1 (MQ=255) aaGAGCACGGCGAAGTGTGCCCTGCCAACTGGAAAATAGGCGACAAGGGCATGAACGCTTCGCCTGAAGTCGTTGATGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAAACTGCCTTCGTGGCCGGttt > 1:6579728/1‑150 (MQ=255) aaGAGCACGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCGTCGTGGCCGGttt > 2:4838096/1‑150 (MQ=255) agagCACGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGtttt < 2:4259033/150‑1 (MQ=255) gagCACGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGttttt < 1:645047/150‑1 (MQ=255) cACGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATAAAAAAACCGGCCACGAAGGCCGGttttttca < 1:6746707/150‑3 (MQ=39) aCGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTAt < 1:5521309/150‑1 (MQ=255) aCGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTAt < 2:4417801/150‑1 (MQ=255) aCGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTAt < 2:1949770/150‑1 (MQ=255) cGGCGAAGTGTGCGCTGCCAACTGGAAAAAAGGCGACAAGGGCATGCACGCTTCGCCTGAAGGCGTTGCTGCCTCCCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATAAAAAAACCGGCCACGAAGGCCGGTTTTTTCATg < 2:6134462/150‑1 (MQ=38) cGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCt > 2:1318004/1‑150 (MQ=255) aaGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTc < 1:2431012/150‑1 (MQ=255) gtgtGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACACTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCt < 2:5173813/150‑1 (MQ=255) gtgCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCtgt > 1:5151746/1‑150 (MQ=255) cccTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGcc < 2:2104201/150‑1 (MQ=255) cccTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGcc < 2:5247091/150‑1 (MQ=255) cccTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGcc < 2:5049243/150‑1 (MQ=255) cccTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGGTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCGGTAATGGCTGCGTGCATGAAAAAACCGGCCTTCGGGGCCGGATTTTTTATGCCTTCCTGTGcc < 2:5333919/150‑1 (MQ=255) ccTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGAATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCg > 2:2789951/1‑150 (MQ=255) ggCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGACCGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGc < 2:577734/149‑1 (MQ=255) aaCTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGc > 1:2657581/1‑146 (MQ=255) tGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTcg > 1:6159347/1‑150 (MQ=255) tGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTcg > 2:5432767/1‑150 (MQ=255) tGGAAAAAAGGCGACAAGGGCACGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTcg > 2:5877661/1‑150 (MQ=255) gAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTcgcg > 2:2702035/1‑150 (MQ=255) gAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTcgcg > 2:6627108/1‑150 (MQ=255) aaaaaaGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCgg < 2:7054384/150‑1 (MQ=255) aaaaGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGgc > 1:6936299/1‑150 (MQ=255) aaGGCTACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGATGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGACGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGgcgc > 1:2926743/1‑150 (MQ=255) aaGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGgcgc < 1:3336988/150‑1 (MQ=255) aaGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTACCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCGTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGgcgc < 2:1011086/150‑1 (MQ=255) aGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGgcgcg < 1:204952/150‑1 (MQ=255) gACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCcg > 2:1264011/1‑150 (MQ=255) gACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCcg > 2:2958894/1‑150 (MQ=255) gACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCcg > 2:6704794/1‑150 (MQ=255) gACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCcg > 1:4282798/1‑150 (MQ=255) gACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTGTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCcg > 2:6555113/1‑150 (MQ=255) ccacgggCATGCACGCTTCGCCTGACGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCACGCTGGAAGTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTGCGCGGGCGCGCCcgc < 2:1767698/146‑1 (MQ=255) aCAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCcgc > 2:4554672/1‑150 (MQ=255) aCAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGGGCGGGCCTCTTCGCGGGCGCGCCcgc > 1:7199355/1‑150 (MQ=255) aGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGaa < 1:7372295/150‑1 (MQ=255) aGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGaa < 2:3074702/150‑1 (MQ=255) aGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGaa < 2:3425723/150‑1 (MQ=255) gggCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTCCCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAAt < 2:4346881/150‑1 (MQ=255) gCATGACCGCTTCGCCTGAAGGCGTTGCTGCCGACCGGCGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTGCGCGGGCGCGCCCGCGAATGc < 1:4015876/150‑1 (MQ=255) aTGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCt > 1:5883230/1‑150 (MQ=255) aaCGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTa < 1:6109507/150‑1 (MQ=255) ttCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGa < 2:3496501/150‑1 (MQ=255) ttCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGa < 1:1454263/150‑1 (MQ=255) gtCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTGGTGGCCGGTTTTTTTATGCCTTCCCGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGa < 2:6845370/149‑1 (MQ=255) tCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTTCTGCGTGCATGAAAAAACCGGCCGTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGAt < 1:2127200/150‑1 (MQ=255) tCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGAt < 1:1585602/150‑1 (MQ=255) gCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCa < 1:756505/150‑1 (MQ=255) ccTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGCATGCCGTTAGCAGATCaa > 1:1015484/1‑150 (MQ=255) tGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATc > 2:6433355/1‑150 (MQ=255) tGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATc > 2:233512/1‑150 (MQ=255) tGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTGTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATc > 2:3947190/1‑150 (MQ=255) aaGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGt < 1:3901921/150‑1 (MQ=255) ggCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTg > 2:2489808/1‑150 (MQ=255) gctgcCTACCTGAGCGAGCACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGc < 1:957367/70‑1 (MQ=255) ctgcCTACCTGAGCGAGAACGCTGGCAAGCTGTAAGTGCTGCGTGCATGAAAAAACCGGCCGTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATcgc < 2:3803190/150‑1 (MQ=255) tgcCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATcgcg > 2:7361351/1‑150 (MQ=255) gcCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCgcgc < 2:4658331/150‑1 (MQ=255) tACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAg < 2:2851132/150‑1 (MQ=255) tGAGCGAGAACGCTGGCATGCTGTAATTGCTGCGTGCATGCAAACACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTGTAGCAGATCATTCTTTGAAATCGCGCCAgccga < 2:5797578/150‑2 (MQ=255) gAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAgccgcc < 1:114246/150‑1 (MQ=255) gagaACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTGTAGCAGATCAATCGTTGAAATCGCGCCACCCGccccat > 1:6876610/1‑147 (MQ=255) agaACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCAttt < 2:840494/150‑1 (MQ=255) aaCGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCAtttct < 2:324861/150‑1 (MQ=255) cGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCAtttcttt < 2:1147786/150‑1 (MQ=255) cGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCAtttcttt < 1:7084102/150‑1 (MQ=255) gCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCAGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCACCAGCCGCCCATTTCTTTCCAGc < 2:2014652/150‑1 (MQ=255) gCAAGCTGTAATTGCTGCGTGAATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGc < 1:2789951/150‑1 (MQ=255) aaGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCAATTCGTTCCAGCgg > 2:6305357/1‑150 (MQ=255) gCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGtt < 2:1733401/150‑1 (MQ=255) tGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTACAGCGGTTGa > 1:1059515/1‑150 (MQ=255) gcGTGCATGAAAAAACCGGCCTTCGTGGCCGTTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCa < 1:3615502/150‑1 (MQ=255) tGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCAGaa < 2:4679893/150‑1 (MQ=255) cATGAAAAAACCGGCCTTCGTGGCCGGTTTTCTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCAGAACa < 1:2283805/150‑1 (MQ=255) ataaaaaaaCCGGCCACGAAGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCAGAACAg < 2:495976/147‑1 (MQ=255) ataaaaaaaCCGGCCACGAAGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCAGAACAg > 1:495976/4‑150 (MQ=255) aTGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCAGAACAg > 2:2336626/1‑150 (MQ=255) aTGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCAGAACAg < 1:4812610/150‑1 (MQ=255) aTGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAAACGATGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCAGAACAg > 2:7206752/1‑150 (MQ=255) taaaaaaaCCGGCCACGAAGGCCGGTTTTTTTATGCCTTCCTGTGCCGACCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCAGaa < 1:5817594/144‑1 (MQ=255) gAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCAGAACAGCt > 2:1546120/1‑150 (MQ=255) aaaaaaCCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCCGGCGCGCCCGCCCATGCCGTTTGCAGATCAATCGGTTTAATCGCGCCAGCCGCCCCAATCTTTACAGCGGTTGAAGGTGCCGCAGAACAGCtg > 1:6274536/1‑149 (MQ=255) aaaaaCCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCAGAACAGCTCa < 2:5962561/150‑1 (MQ=255) aaaaaCCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCAGAACAGCTCa > 2:170786/1‑150 (MQ=255) ggCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCCCGAATGCCATTATCAGATCAATCGTTGAAATCGCGCCCGCCGCCCAATTCTTTCCAGCGGTTGACGATTCCGCAGAACAGCACAGCGGttt > 1:125244/1‑150 (MQ=255) ccTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCAGAACAGCTCAGCGGTTTtc < 1:323894/150‑1 (MQ=255) cTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCAGAACAGCTCAGCGGTTTtct < 1:5789189/150‑1 (MQ=255) cTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCAGAACAGCTCAGCGGTTTtct < 1:1750195/150‑1 (MQ=255) cTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATAAAAAGTTGAAATCGCGCCCGCCGCCCATTTCTATACAGCGTTTGACGATGCCGCAGAACAGCTCAGCGGttttat > 1:414254/1‑148 (MQ=255) tCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCAGAACAGCTCAGCGGTTTTCTCg < 1:6056126/150‑1 (MQ=255) gTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCAGAACAGCTCAGCGGTTTTCTCGgt < 1:4554553/150‑1 (MQ=255) gTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCAGAACAGCTCAGCGGTTTTCTCGgt < 2:2587363/150‑1 (MQ=255) tGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCAGAACAGCTCAGCGGTTTTCTCGgtg < 2:2248781/150‑1 (MQ=255) | AGTTCCACGAAGAGCACGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCAGAACAGCTCAGCGGTTTTCTCGGTG > NC_002947/1248548‑1248846 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |