Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,352,119 T→A 8.1% intergenic (‑272/+132) udh ← / ← galP‑I uronate dehydrogenase/porin‑like protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,352,1190TA 8.1% 819.2 / 5.5 295intergenic (‑272/+132)udh/galP‑Iuronate dehydrogenase/porin‑like protein
Reads supporting (aligned to +/- strand):  ref base T (118/142);  new base A (30/2);  total (148/147)
Fisher's exact test for biased strand distribution p-value = 6.24e-08
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 297 total aligned reads displayed.

GAAAGGCCTGCGCGGTCGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCAGATCTTGATCAGAGCAACGACAGCGG  >  NC_002947/1351971‑1352268
                                                                                                                                                     |                                                                                                                                                     
gAAAGGCCTGCGCGGTCGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATc                                                                                                                                                      <  2:2202079/150‑1 (MQ=255)
gAAAGGCCTGCGCGGTCGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATc                                                                                                                                                      >  1:3895862/1‑150 (MQ=255)
gAAAGGCCTGCGCGGTCGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGAATTCGCGGGTAAACCCGCTCCTCCACCTGATCACTGCTGGACACACATc                                                                                                                                                      >  2:5831087/1‑150 (MQ=255)
      ccTGCGCGGTCGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCACCTACACCTGATCAATGGTGGACACACAACGGAGGt                                                                                                                                                >  1:3569386/1‑150 (MQ=255)
       cTGCGCGGTCGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCCCACCTAAACCTGAGAAATGGTGGACACACAACGGAgggg                                                                                                                                               >  1:5007578/1‑148 (MQ=17)
        tGCGCGGTCGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCGACACCAGATCAATGGTGGACACACCTCGGAGGGTg                                                                                                                                              >  1:1823824/1‑150 (MQ=255)
        tGCGCGGTCGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCCCTCCAACACCAGATAAATGGTGGACCCACCACGGAGGTTg                                                                                                                                              >  1:3808091/1‑150 (MQ=17)
        tGCGCGGTCGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAAACCGCTCCGAAACCGGATCAATGGTGGACACACATAGGAGGTTg                                                                                                                                              >  1:5966807/1‑150 (MQ=18)
         gcgcGGTCGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTgg                                                                                                                                             <  2:2808093/150‑1 (MQ=255)
         gcgcGGTCGCCCGTAGGAGCGGGATTACCCGCGAAAGGGCCAGGCCTGCTGGCCAATTACCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTgg                                                                                                                                             <  2:6607804/150‑1 (MQ=255)
          cgcgGTCGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTggg                                                                                                                                            <  2:4316670/150‑1 (MQ=255)
           gcgGTCGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGgc                                                                                                                                           <  1:3026469/150‑1 (MQ=255)
                 gCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGc                                                                                                                                     <  2:1594821/150‑1 (MQ=255)
                 gCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGGCCTGCTGGCCAATTTAAACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTAGCGGGTAAACCCGCTCCTACACCTGATAAATGGGGGACACACATCGGAGGTTTGGCACAGGc                                                                                                                                     >  2:126090/1‑150 (MQ=18)
                     gTAGGAGCGGGTTTACCCGCGAAAGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCt                                                                                                                                 <  2:1035738/150‑1 (MQ=255)
                     gTAGGAGCGGGTTTACCCGCGAAAGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCt                                                                                                                                 <  1:4355401/150‑1 (MQ=255)
                       aGGAGCGGGTTTACCCGCGAAAGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCtgt                                                                                                                               <  1:1058865/150‑1 (MQ=255)
                           gCGGGTTTACCCGCGAAAGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCCCACCTACACCAGATACAATGTGGACCCCCAAGGGCGGGTGGGCGCGGGCCGcgggggtg                                                                                                                           >  1:3181698/1‑143 (MQ=14)
                              ggTTTACCCGCGAAAGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAg                                                                                                                        >  1:1929739/1‑150 (MQ=255)
                              ggTTTACCCGCGAAAGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCGCCTACACCTGCTCAATGGTGGACACACAACGGCGGGTGGGCGCAGGCCGCGGGGgaggag                                                                                                                        >  1:5291955/1‑150 (MQ=17)
                                 ttACCCGCGAAAGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCgg                                                                                                                     <  2:7402869/150‑1 (MQ=255)
                                    cccGCGAAAGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATGAATTGTTGACACAAATCGGAGGTTTGTGGGAGGGCGCTGTGTAGGATGGGGtt                                                                                                                  >  1:5401825/1‑150 (MQ=17)
                                    cccGCGAAAGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCACTGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCggg                                                                                                                    <  2:6202661/148‑1 (MQ=255)
                                    cccGCGAAAGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCggg                                                                                                                    >  1:6202661/1‑148 (MQ=255)
                                     ccGCGAAAGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGttt                                                                                                                 <  2:1729980/150‑1 (MQ=255)
                                     ccGCGAAAGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCACCTACACCTGATCAAAGGTGGACACACAACGGGGGGTGGGCGCAGGCCGCTTGGTAGGAGCGGGttt                                                                                                                 >  1:2340387/1‑150 (MQ=18)
                                           aaGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCcgc                                                                                                           <  2:1810020/150‑1 (MQ=255)
                                           aaGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCcgc                                                                                                           <  2:1131154/150‑1 (MQ=255)
                                           aaGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTAGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCagc                                                                                                           >  2:5355496/1‑150 (MQ=255)
                                           aaGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATAAATGGTGGACACACAACGGATGGTGGGCGCAGGCCGCTGGGTAGGAGCGGGGTTAccacc                                                                                                           >  2:1338367/1‑147 (MQ=18)
                                               gCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAAAGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAAt                                                                                                       >  2:2285432/1‑150 (MQ=255)
                                                 cAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTCCACCTGAGCAAAGGTGGACACACAACGGCTGGTGGGCGCTGTCCGCTGGGGAGGAGCGGGTGTACCCGCGAATgg                                                                                                     >  2:2742238/1‑150 (MQ=18)
                                                    gCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCTGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTTCCCGAGAATGggcc                                                                                                  >  2:6445004/1‑150 (MQ=255)
                                                    gCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAAAGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCGGGGTAGGAGCGGGTTTTCACGCGAAAGggcc                                                                                                  >  1:1182804/1‑150 (MQ=18)
                                                        gctgGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCGACCGTATTCGCGGGTAATCCCGCTCCTACACCTGATCAATGGTGGACACACTTCGGTGGTTGGGCGCTGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGggccggcc                                                                                              <  2:590831/150‑1 (MQ=18)
                                                           ggCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGGGGACACACATCGGAGGTTGGGCGCCGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGcccgg                                                                                           >  2:2021136/1‑148 (MQ=255)
                                                           ggCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAAAGGTGGACACACAACGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTTCCCGCGAATGGGCCGGCCctg                                                                                           >  2:5771411/1‑150 (MQ=255)
                                                              cAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTTTTCGCGGGTAAACCCGCTCCTACACCTGATCATTGGTGGACACACATCGGTGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGTTTTACCCGCGAATGGGCCGGCCctgctg                                                                                        <  1:751784/150‑1 (MQ=255)
                                                              cAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCctgctg                                                                                        <  2:5436970/150‑1 (MQ=255)
                                                              cAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCctgctg                                                                                        <  2:7060546/150‑1 (MQ=255)
                                                               aaTTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCCCTCCAAAAACAGATCACAGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCGGGGTGGGGGCGGGTGTTGCCGCGGAGGGGCCGGCCCGGCggg                                                                                       >  1:5648722/1‑150 (MQ=17)
                                                                     ccccggccgTTCACGGTTGCGGCCGCCACCGTTTTCGCGGGCAACCCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCGGTGTAGGAGGGGGTTTCCCCGGGAATGGGCCGGCCCTGCTGGCCAGtt                                                                                 <  1:7238856/145‑1 (MQ=37)
                                                                     cACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGtt                                                                                 <  2:3007465/150‑1 (MQ=255)
                                                                     cACCCGCCGTTCACCGTGGCCGCCGCCACCGTAGTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGtt                                                                                 <  2:4554792/150‑1 (MQ=255)
                                                                      aCCCGCCGTTCACCGTTGCCGCCGCCACCGTTTTCGCGGGTAAACCCGCTCCTACACCTGATCACTGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGttt                                                                                <  2:4754750/150‑1 (MQ=255)
                                                                       cccGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAAACCGCTCCTACACATGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGtttt                                                                               >  2:6304455/1‑150 (MQ=255)
                                                                        ccgccgTTCACCTTTGCCGCCGCCACCTTTTTCGCGGGTAAACCCGCTCCTACACCTGATCATTGGTGGACAAAAATCGGAGGTTGGGCGCAGGCGGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTc                                                                              <  2:2521013/150‑1 (MQ=21)
                                                                        ccgccgTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCGCCTACACCGGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCGGGGTAGGAGCGGGGTTACCCGCGAATGGGCCGGCCCGGCGGGCCCGtttta                                                                              >  2:5597251/1‑149 (MQ=21)
                                                                         cgccgTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAAAGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTAACCGCGCATGGGCCGGCCCGGCGGGCCAGTTTTCa                                                                             >  2:723771/1‑150 (MQ=21)
                                                                          gccgTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCAc                                                                            <  2:5483503/150‑1 (MQ=255)
                                                                              ttCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACccgc                                                                        >  2:3064481/1‑150 (MQ=255)
                                                                              ttCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCGCCTACACCTGATCAATGGTGGACACACAAGGGAGGTTGGGCGCAGGCCGCGGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACacgc                                                                        >  1:4875352/1‑150 (MQ=21)
                                                                               tCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATAAAAGGTTGACACCAATCGGAGGGAGGGAGCAGGACGCAGTGTAGGAGAGGGTTTACCAGCGAATGGGCCGGCCCGGCTGGCCAGATTTCACccgcc                                                                       >  2:3961632/1‑150 (MQ=18)
                                                                                 aCCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCcgc                                                                                                           <  1:5126554/112‑1 (MQ=255)
                                                                                 aCCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCGGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCcgccgt                                                                     >  2:1938693/1‑150 (MQ=255)
                                                                                   cGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATGGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCcgccgttc                                                                   <  1:42434/150‑1 (MQ=255)
                                                                                   cGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCcgccgttc                                                                   <  2:5630516/150‑1 (MQ=255)
                                                                                   cGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCcgccgttc                                                                   <  2:5966807/150‑1 (MQ=255)
                                                                                            ccccACCGTCTTGGGGGTTAAACCCGCACCTACCCCTTACCACGGGGGCACACCCTGGGGTGGTGGGGCGCCGGCCGGTGTGTCGGCGGGGTTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGTTgcc                                                          <  1:5597251/148‑1 (MQ=12)
                                                                                               cACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGTTgccgcc                                                       >  2:7151220/1‑150 (MQ=255)
                                                                                                   cctttCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCGGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGTTGCCGccacca                                                   >  2:3457769/4‑150 (MQ=255)
                                                                                                     aTTCGCGGGTACACCCGCTCCTACACCTGATCAATGGTGGACACCCATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGTTGCCGCCaccacc                                                 <  2:4169144/150‑1 (MQ=255)
                                                                                                      ttCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCCAATGGGCCCGCCCAGCTGGCCACTTTTCACCCCCCGTGCCCCCTTGCCGCCACCACCg                                                >  1:5875092/1‑150 (MQ=21)
                                                                                                         gcgGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACCCATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGGGGCCGCCCccgccgggg                                             >  2:4472636/1‑147 (MQ=21)
                                                                                                         gcgGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCtgtg                                                                                                                              <  1:4520210/69‑1 (MQ=255)
                                                                                                           gggTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGTTGCCGCCACCACCGTATTc                                           >  2:4634834/1‑150 (MQ=255)
                                                                                                             gTAAACCCGGTCCTACACCTGATCAATGGTGGACACACATCGGTGGTTGGGCGCTGGCCGCTGCGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGTTGCCGCCACCACCGTATTcgc                                         <  2:5109/150‑1 (MQ=255)
                                                                                                             gTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATTGGCCGGCCCTGCTGGCCAGTTTTCACACGCCGTTCGCCGTTGCCGCCACCACCGTATTcgc                                         >  1:7023098/1‑150 (MQ=255)
                                                                                                              tAAACCCGCTCCTACACCTGATCAATGGTGGTCACACATCGGTGGTTGGGGGCTGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGTTGCCGCCACCACCGTATTcgcg                                        <  1:6056996/150‑1 (MQ=255)
                                                                                                               aaccccGCTCCTACACCTGCTCTATGGTGGACACACCTCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGGTGCCGCCACCACCGTATTCGCgg                                       <  2:5140200/147‑1 (MQ=25)
                                                                                                               aaccccGCTCCTACACCTGAACAATGGTGGACACACATCGGAGGTTGGGCGCCGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGTTGCCGCCACCACCGTATTCGCgg                                       <  1:710838/147‑1 (MQ=255)
                                                                                                               aaaCCCGCTCCTACACCTTATCAATGGTGGACACACATCGGCGGTTGGGCGCTGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGTTGCCGCCACCACCGTATTCGCgg                                       <  2:3263346/150‑1 (MQ=255)
                                                                                                               aaaCCCGCTCCTACACCTGATCTTTGGTGCACACACATCGGTGGTTGGGCGCCGGCGGCTGTGTAGTAGCGGGTTTCCCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGTTGCCGCCACCACCGTATTCGCgg                                       <  1:1362937/150‑1 (MQ=25)
                                                                                                                 aCCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGTTGCCGCCACCACCGTATTCGCGGGt                                     >  1:41264/1‑150 (MQ=255)
                                                                                                                   ccGCTCCTACACCTCAACAATGGTGTACAAACATCGCAGGTTGCGCGCAGGCCGACGAGTAGTAGCGGGTTTACCCGCGAATTGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGTTGCCGCCACCACCGTATTCGCGGGTaa                                   <  1:836000/150‑1 (MQ=21)
                                                                                                                     gCTCCTACACCTTATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGTTGCCGCCACCACCGTATTCGCGGGTAAAc                                 >  1:3404433/1‑150 (MQ=255)
                                                                                                                     gCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGTTGCCGCCACCACCGTATTCGCGGGTAAAc                                 >  1:2853009/1‑150 (MQ=255)
                                                                                                                     gCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGTTGCCGCCACCACCGTATTCGCGGGTAAAc                                 >  1:2438815/1‑150 (MQ=255)
                                                                                                                       tCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGTTGCCGCCACCACCGTATTCGCGGGTAAAccc                               >  2:3579942/1‑150 (MQ=255)
                                                                                                                       tCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGGTTTCACCCGCCGTTCGCCGTTGCCGCCACCACCGTATTCGCGGGTAAAccc                               >  2:4046467/1‑150 (MQ=255)
                                                                                                                          tACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCa                            >  2:6224716/1‑150 (MQ=255)
                                                                                                                           acacCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCAg                           <  2:3734073/150‑1 (MQ=255)
                                                                                                                            cacCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCAGa                          >  1:4724524/1‑150 (MQ=255)
                                                                                                                             acCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGTTGCCGCCACCACCGTATTAGCGGGTAAACCCGCAGAt                         >  1:2137634/1‑150 (MQ=255)
                                                                                                                              ccTGATCAATGGTGGACACACATCGGATGTTGGGCGCTGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCAGATc                        <  2:2611796/150‑1 (MQ=255)
                                                                                                                              ccTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCAGATc                        >  1:6341894/1‑150 (MQ=255)
                                                                                                                               cTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCAGATCt                       >  2:488775/1‑150 (MQ=255)
                                                                                                                                  aTCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGTTGCCGCCACCACCGTATTCGCGGGTAAAccc                               <  2:4292199/139‑1 (MQ=255)
                                                                                                                                  aTCAATGGTGGACACACATCGGAGGTGGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCAGATCTTGa                    <  1:158872/150‑1 (MQ=255)
                                                                                                                                      aaTGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCAGATCTTGATCa                 >  2:7130851/1‑150 (MQ=255)
                                                                                                                                      aaTGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCAGATCTTGATCa                 <  1:4825817/150‑1 (MQ=255)
                                                                                                                                        tggtggACACCCATCGGCGGTTGGGCGCTGGGCGGTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCAGATCTTGATCaga               <  2:211381/150‑1 (MQ=21)
                                                                                                                                        tggtggACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCAGATCTTGATCaga               >  2:904521/1‑150 (MQ=255)
                                                                                                                                        tggtggACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCAGATCTTGATCaga               <  1:4425120/150‑1 (MQ=255)
                                                                                                                                        tggtggACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCAGATCTTGATCaga               >  1:5992402/1‑150 (MQ=255)
                                                                                                                                          gtggACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCAGATCTTGATCAGAGc             >  2:3175826/1‑150 (MQ=255)
                                                                                                                                            ggACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCAGATCTTGATCAGAGCaa           >  1:4175091/1‑150 (MQ=255)
                                                                                                                                            ggACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCAGATCTTGATCAGAGCaa           <  1:6800978/150‑1 (MQ=255)
                                                                                                                                             gACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCAGCTGGCCAGTTTTCAACCGCCGTTCGCCGTTGCCCCCACCACCGTATTCGCGGGTAAACCCGCAGATCATGATCAGAGCAAc          >  1:953096/1‑150 (MQ=21)
                                                                                                                                                acacaTCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCAGATCTTGATCAGAGCAACGAc       >  1:3631897/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GAAAGGCCTGCGCGGTCGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCCGCTGTGTAGGAGCGGGTTTACCCGCGAATGGGCCGGCCCTGCTGGCCAGTTTTCACCCGCCGTTCGCCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCAGATCTTGATCAGAGCAACGACAGCGG  >  NC_002947/1351971‑1352268

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: