| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,397,872 | A→G | 14.1% | intergenic (+87/‑99) | PP_1214 → / → ruvC | transcriptional regulator/crossover junction endodeoxyribonuclease RuvC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,397,872 | 0 | A | G | 14.1% | 529.3 / 59.0 | 192 | intergenic (+87/‑99) | PP_1214/ruvC | transcriptional regulator/crossover junction endodeoxyribonuclease RuvC |
| Reads supporting (aligned to +/- strand): ref base A (65/99); new base G (16/11); total (81/111) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.18e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.04e-01 | |||||||||||
Only 100 of 193 total aligned reads displayed.
GACGTGCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGG > NC_002947/1397723‑1398020 | gacgTGCAGAAAGTCTATTCAAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACACCTATTa < 2:3158836/150‑1 (MQ=255) acgTGCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTAc < 1:7049244/150‑1 (MQ=255) gTGCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGc < 2:5833681/150‑1 (MQ=255) gTGCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGc < 2:1510908/150‑1 (MQ=255) tGCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGcc < 2:2746780/150‑1 (MQ=255) tGCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGcc < 2:3279759/150‑1 (MQ=255) cAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑Ca < 1:554975/150‑1 (MQ=255) gAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CAtt < 2:3355853/150‑1 (MQ=255) cGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCa < 2:6284234/150‑1 (MQ=255) gTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCaa < 1:3773329/150‑1 (MQ=255) gTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCaa < 1:3773534/150‑1 (MQ=255) tCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCaaa < 2:1413248/150‑1 (MQ=255) tCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCaaa < 1:2963722/150‑1 (MQ=255) tCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCaaa < 1:424358/150‑1 (MQ=255) tCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCaaa < 2:1519840/150‑1 (MQ=255) cTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGACTGTGACGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAAt < 2:3614937/150‑1 (MQ=255) ttCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAAtgtg < 1:2704561/150‑1 (MQ=255) ttCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAAtgtg < 1:2791660/150‑1 (MQ=255) ttCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAAtgtg < 1:1262483/150‑1 (MQ=255) ttCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAAtgtg < 1:857425/150‑1 (MQ=255) ttCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAAtgtg < 2:4701656/150‑1 (MQ=255) ttCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTACTGCACCACATTTGAAAtgg < 1:2322027/150‑2 (MQ=37) tCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATgtgg < 1:3023704/150‑1 (MQ=255) ccAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATgtggt < 2:5623410/150‑1 (MQ=255) ccAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTACTGCACCACATTTGAAAtgggc < 2:566131/150‑4 (MQ=37) cAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATgtggtg < 1:4628561/150‑1 (MQ=255) aTGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCa < 2:6176629/150‑1 (MQ=255) aTGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCa < 1:3850244/150‑1 (MQ=255) aTGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCa < 1:1876275/150‑1 (MQ=255) ccAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTAc < 1:5757101/150‑1 (MQ=255) tttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTa < 2:1300039/150‑1 (MQ=255) tttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTa < 1:1499436/150‑1 (MQ=255) ttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAg < 1:5879365/150‑1 (MQ=255) ttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTACTGCACCACATTTGAAATG‑GGCGTAATACCTGTAg < 2:822903/150‑1 (MQ=18) tCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAgg < 1:5023601/150‑1 (MQ=255) gacgaGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGCGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTACTGCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGc < 1:2331153/150‑1 (MQ=18) cgaGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCgg < 1:3900995/150‑1 (MQ=255) cgaGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCgg < 1:106904/150‑1 (MQ=255) cgaGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCgg < 1:5127061/150‑1 (MQ=255) cgaGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTACTGCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCgg < 1:6415750/150‑1 (MQ=18) gagaTCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCggg < 2:5442489/150‑1 (MQ=255) gagaTCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑ACCGCGCCAACAGGGATTACCCC‑CAATTCAAAATTGGTGGAGTACCTGTTTGAGCggg > 1:1162164/1‑150 (MQ=255) agaTCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGt < 1:2012325/150‑1 (MQ=255) aTCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTACTGCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCggg < 1:5834871/147‑1 (MQ=18) aTCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTACTGCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCggg > 2:5834871/1‑147 (MQ=18) tCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTACTGCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTTa < 1:6645380/150‑1 (MQ=17) tCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCGCCTACAGGTATTAAGCC‑CCTTTAAAATGTGGTGCACTACCTGTAGGAGCGGGTTTa > 2:1055295/1‑150 (MQ=39) aTGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑cc < 1:7229416/150‑1 (MQ=255) tGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑ccc > 2:4747897/1‑150 (MQ=255) tGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑ccc < 1:1678340/150‑1 (MQ=255) gAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCcgc < 2:2954872/150‑1 (MQ=255) aaaaCCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTa < 1:1068473/132‑1 (MQ=255) cTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGTTAAA‑CCCGCTCCTACCGTTATCACGCC‑AATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGTTTTA‑CCCGCGAAAgg < 2:5216868/150‑1 (MQ=255) ggTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑ACCCCGCCTACAGGTATTAAGCC‑CCTTTCAAATGTGGTGCAGTGCCGGGGGGGGCGGGGTTA‑ACCGCGCAAGGGCCGgcgcc > 2:4525414/1‑149 (MQ=255) tggatttttGTCCAAACTGTGCGGGTTTGTTCGGGCCTGTGCGGGCCCTTGCG‑GGGTAAACCCCGCGCCTCCCGTTTTGACGCC‑CATTACAATTGTGGGGCCGAACCTGTGGGCGGGGGTTAC‑CCCGCGAAAGGGCCGGCGCAGTTTGTa < 2:7034349/145‑1 (MQ=255) ggCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑c < 2:7259413/123‑1 (MQ=255) ggCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑c > 1:7259413/1‑123 (MQ=255) gtttGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCCGGTAAA‑ACCCCGCCAAAAGGTATTAAGCC‑CAATTACAAGGGGGTGCACTACCGGGAGGAGCGGGTTTA‑CCCCCGACAGGGCCGGCGCAGGTGGTTGAGAt > 2:2010574/2‑150 (MQ=255) tctGAGCGTTTGATAGCGCCTGTGCCGGCTCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCgg > 1:3786607/1‑101 (MQ=255) tctGAGCGTTTGATAGCGCCTGTGCCGGCTCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCgg < 2:3786607/101‑1 (MQ=255) tttGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAC‑CCCGCTCCTACCGGTATTACGCC‑CTTTTAAAATGTGGTGCAGTACCTGTTGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGc < 2:6673361/150‑1 (MQ=37) gcgcCTGTGCGGGCCCTTTCGCGGGTAAA‑CCCGCTCCGACCGGTATTACGCC‑CATTTCAATTGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAATGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGa < 2:4306193/150‑1 (MQ=38) cTGTGCCGGCCCTTTCGCGGGGAAA‑CCCGCTCCGCCCGGGATTACGCC‑CATTTCAAAGGTGGTGCCGTACCGGGAGGAGCCGGGGTA‑CCCGCGCAAGGGCCGGCGCCCGGGGGAGCGATGCATCAATTTTTCGACGGGCGGTATGActct > 2:6765129/1‑150 (MQ=255) ggcccGCCCCTTTCGGGGTAAAA‑CCCGCCCCTACAGTTAACACCCC‑CTTTAAAATTGTGGTGCTGAACTTTTAGTCG‑GGGTTTACCCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGa < 2:6223532/147‑1 (MQ=255) gccccTTTCGCGGTTAAC‑CCCGCTCCTACCGTTATTACGCC‑CTTTTCATTTGGGGGGCAGTACCTTTAGGAGCGGTTTAA‑CCCGCTAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTa < 2:3938767/148‑1 (MQ=255) gCCCTTTCGCGGGTAAA‑CCCCCGCCAACAGGTATTACGCC‑CCTTTCAAATGTGGTGCACTACCTGGAGGAGCGGGTTTA‑CCCGCGCACGGGCCGGCGCAGTTTGGAGAGATTCATCATTTTTTCGGCGGGCTTTATTACTCTTATTCTAg > 2:3552882/1‑150 (MQ=25) ccTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTAc < 2:1217882/60‑1 (MQ=255) ccTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTAc > 1:1217882/1‑60 (MQ=255) ttCGCGGGTAAA‑CCCGCTCCTACAGGTACTGCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGGTTGTAGAGATGCATCCTTTTTTCGACGGGCTTTATGACTCTGAGTCTAGGTATc > 2:4867877/1‑150 (MQ=14) aaa‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGc > 2:4133016/1‑150 (MQ=255) aa‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCt > 2:3829610/1‑150 (MQ=255) aa‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCt > 1:4432926/1‑150 (MQ=255) cccGCTCCTACAGGTACTGCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcg > 1:7008859/1‑150 (MQ=18) ccGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGCTTCTAGGTATCGACCCCGGCTcgc > 2:6847803/1‑150 (MQ=255) ccGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcgc > 2:6328062/1‑150 (MQ=255) ccGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcgc > 2:2305547/1‑150 (MQ=255) ccGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcgc > 2:6145880/1‑150 (MQ=255) ccGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcgc > 1:1381531/1‑150 (MQ=255) ccGCTCCTACAGGTACTGCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcgc > 2:1560974/1‑150 (MQ=18) ccGCTCCTACAGGTACTGCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcgc > 1:3273918/1‑150 (MQ=18) cGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcgcg > 2:4038780/1‑150 (MQ=255) tCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCAt > 2:3249602/1‑150 (MQ=255) tCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCACAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCAt > 1:6180041/1‑150 (MQ=255) tCCTACAGGTACTGCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCAt > 2:4426269/1‑150 (MQ=18) tCCTACAGGTACTGCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCAt > 2:5415907/1‑150 (MQ=18) cTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGtt < 1:6752194/78‑1 (MQ=255) cTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCa > 2:1544154/1‑150 (MQ=255) cTACAGGTACTGCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTTA‑CCCGCGACAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCa > 1:4117594/1‑150 (MQ=18) cTACAGGTACTGCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCa > 1:398687/1‑150 (MQ=18) tACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCTGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAg < 2:645913/125‑1 (MQ=255) tACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAc > 2:2392955/1‑150 (MQ=255) aCAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAcc > 2:4101805/1‑150 (MQ=255) aGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTg < 2:5955047/76‑1 (MQ=255) aGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTg > 1:5955047/1‑76 (MQ=255) ggTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGc > 2:2199822/1‑150 (MQ=255) gTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGttt > 1:5465428/1‑73 (MQ=255) gTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCt > 1:3532956/1‑150 (MQ=255) ttACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATg > 2:5609959/1‑150 (MQ=255) ttACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATg > 1:5650406/1‑150 (MQ=255) tACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATgg > 1:5252668/1‑150 (MQ=255) | GACGTGCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTA‑CCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGG > NC_002947/1397723‑1398020 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |