| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,445,054 | T→C | 8.9% | intergenic (‑429/‑230) | yveA ← / → PP_1260 | aspartate‑proton symporter/transposase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,445,054 | 0 | T | C | 8.9% | 224.7 / 10.0 | 80 | intergenic (‑429/‑230) | yveA/PP_1260 | aspartate‑proton symporter/transposase |
| Reads supporting (aligned to +/- strand): ref base T (38/33); new base C (2/5); total (42/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.57e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.24e-01 | |||||||||||
GCTCCTACAGGTACGGCGCAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAGG > NC_002947/1444905‑1445091 | gCTCCTACAGGTACGGCGCAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGt > 2:5644616/1‑150 (MQ=255)gCTCCTACAGGTACGGCGCAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGGCGCGCCGCAAACAAGAGGTGTACGGCTTCAGTTCCGCCGCGACGCGGACAGTTTGAAAAAGAAAAGGCGGt > 1:6459128/1‑150 (MQ=18)gCTCCTACAGGTACGGAGCAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGt < 1:2180862/150‑1 (MQ=255) cTCCTACAGGTACGGCGCAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTGCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGtt < 2:4762306/150‑1 (MQ=255) cTCCTACAGGTACGGCGCAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGtt < 2:737938/150‑1 (MQ=255) tCCTACAGGTACGGCGCAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTg < 2:1688148/150‑1 (MQ=255) tCCTACAGGTACGGCGCAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTg < 1:910558/150‑1 (MQ=255) tCCTACAGGTACGGCGCAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTg < 1:1019922/150‑1 (MQ=255) tCCTACAGGTACGGCGCAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTg < 2:2067136/150‑1 (MQ=255) tCCTACAGGTACGGCGCAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCGGACAGTTTGAAAAATAAAAGGCGGTTg > 1:6896431/1‑150 (MQ=255) cTACAGGTACGGCGCAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGc > 1:6698011/1‑150 (MQ=255) tACAGGTACGGCGCAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGcc > 2:766280/1‑150 (MQ=255) aCAGGTACGGCGCAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGccc > 1:4192850/1‑150 (MQ=255) aCAGGTACGGCGCAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGccc > 2:2540999/1‑150 (MQ=255) cAGGTACGGCGCAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCg > 2:5313115/1‑150 (MQ=255) cAGGTACGGCGCAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGCTGGccct < 2:2206250/150‑2 (MQ=255) cAGGTACGGCGCAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGAGCTGTCGCGCAGCAAAAATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATATTGAAAAAGAAAAGGCGGTTGGCCCg > 2:485484/1‑150 (MQ=255) cggTACGGCGCAGAATTCGAAAGCTGTGCGGGCCCGCGACGAGATCACCCAGCCCTTCC‑GGCCTGCGCTGTCGCGCAGCCAACATGAGGTCTCCCGCTTCAGTGCCGCAGCGACGCTGCCAGAGTGAAAAAGAAAAGGCCGATGGCCCgg > 2:5365353/2‑150 (MQ=14) aGGTACGGCGCAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCgg < 2:1188477/150‑1 (MQ=255) aGGTACGGCGCAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTACGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCgg > 1:3176434/1‑150 (MQ=255) aGGTACGGCGCAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCGTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCgg > 1:3176270/1‑150 (MQ=255) gTACGGCGCAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTa > 2:6045608/1‑150 (MQ=255) gTACGGCGCAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTa > 2:5274677/1‑150 (MQ=255) gTACGGCGCAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTa > 2:7288556/1‑150 (MQ=255) tACGGCGCAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCGTCAGTTCCGCAGCGACGCGGACATTTTGAAAAAGAAAAGGCGGTTTGCCCGGTAg > 1:1231469/1‑150 (MQ=255) aCGGCGCAGAATTCGTAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAgg < 1:6677224/150‑1 (MQ=255) aCGGCGCAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAgg < 2:1232846/150‑1 (MQ=255) aCGGCGCAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAgg < 1:4218632/150‑1 (MQ=255) ggCGCAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACACTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGc < 1:2756439/150‑1 (MQ=255) gcgcAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGcc > 1:7181315/1‑150 (MQ=255) cgcAGAATTCGCCATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCa < 2:6693669/150‑1 (MQ=255) cgcAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCa > 1:7444026/1‑150 (MQ=255) cgcAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGAAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCa < 2:1996671/150‑1 (MQ=255) cAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAgc < 1:231519/150‑1 (MQ=255) cAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGGAGGGCCAgc > 1:6312822/1‑150 (MQ=255) aGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGCGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAgcc < 2:4407573/150‑1 (MQ=255) aGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAATGGCGGTTGGCCCGGTAGGGCCAgcc > 1:2397742/1‑150 (MQ=255) aGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAgcc > 2:295557/1‑150 (MQ=255) aGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAgcc < 1:2624010/150‑1 (MQ=255) aGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAgcc < 1:5067093/150‑1 (MQ=255) aGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAgcc < 2:6111597/150‑1 (MQ=255) aGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAgcc > 2:295491/1‑150 (MQ=255) aGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAgcc > 2:1440631/1‑150 (MQ=255) gAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCAGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAcccc > 1:2797613/1‑149 (MQ=255) aaTTCGACATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGTGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGCTGGCCCTACCGGGCCAaccgc < 2:6502249/150‑1 (MQ=14) aTTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCTACCGGGCCAaccgcc < 2:4501473/150‑1 (MQ=14) aTTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGCTGGCCCTACCGGGCCAaccgcc < 2:3293665/150‑1 (MQ=14) ttCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCt > 1:4855799/1‑150 (MQ=255) ttCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACAAGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCt > 1:3502389/1‑150 (MQ=255) cGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGCTGGCCCTACCGGGCCAaccgcc < 1:5136381/147‑1 (MQ=14) cGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGCTGGCCCTACCGGGCCAaccgcc > 2:5136381/1‑147 (MQ=14) gAAATCTGTGGGGGCGCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGTCATTTTGTAATAGAAAAGGGGGTTGGCCCGGTAGGGCCAGCCGGCtttt > 2:3257416/1‑150 (MQ=14) gAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGGTGTCATTTTGTAATAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCtttt > 2:6866959/1‑150 (MQ=255) gAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACAGGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCtgtt > 2:1164328/1‑150 (MQ=255) gAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCACCAAACATGAGGTGTACGGCTTCAGTTCCGCACCGACGCTGACATATTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCtttt > 1:5167888/1‑150 (MQ=255) aaaTCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCCAGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCtttt < 2:4792210/150‑1 (MQ=255) aaaTCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTg > 1:1769537/1‑150 (MQ=39) aaaTCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTg < 1:4121244/150‑1 (MQ=39) aaaTCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACCCTGACAGTTTGAAAAATAAAAGGCGGTTGGCCCGGTAGGGCCAGCCCCCGTTTg > 1:3832506/1‑150 (MQ=14) aaTCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGc < 2:216378/150‑1 (MQ=38) aaTCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGc < 2:7335848/150‑1 (MQ=38) aaTCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCGTTTGc > 1:254809/1‑150 (MQ=38) aTCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCt < 1:4273690/150‑1 (MQ=38) tCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTAAGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAATAAAAGGCGGTTGGCCCGGTAGGGCCACCCGCCTTTTGCtt > 1:3783777/1‑150 (MQ=255) cTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCCTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCttt < 2:5760495/150‑1 (MQ=25) tgtgGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCCGCCGCCTTGTGCTTTg > 2:785261/1‑150 (MQ=25) tgtgGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTg < 2:3267908/150‑1 (MQ=35) tgtgGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGGACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTg < 1:2329764/150‑1 (MQ=25) gtgGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGt < 2:5425114/150‑1 (MQ=34) gtgGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACAAGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTTAAAAATAAAAGTCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGt > 1:2506093/1‑150 (MQ=255) gtgGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACAAGAGGTGTACGGCGTCAGTTCCGCAGCGACCCGGACATTTTGAAAAAGAAAAGGCGGTTGGCCCCGTAGGGCCAGCCGCCGTTTGCGTTGt > 1:1591600/1‑150 (MQ=11) tgGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGtt > 1:6019386/1‑150 (MQ=33) tgGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGtt < 1:755784/150‑1 (MQ=33) tgGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGtt < 2:7181315/150‑1 (MQ=33) tgGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGtt < 2:3030066/150‑1 (MQ=33) tgGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACAGTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGGTTTGtt > 1:1875305/1‑150 (MQ=18) gggggCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTa < 1:3556965/150‑1 (MQ=32) gggggCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTa < 2:1498504/150‑1 (MQ=32) gggggCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTa < 1:1886110/150‑1 (MQ=32) ggggCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGTAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCGTTTGCTTTGTTAg > 1:5668890/1‑150 (MQ=17) ggggCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAATAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAg > 1:5668603/1‑150 (MQ=17) ggggCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGGTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAg > 2:2477120/1‑150 (MQ=17) ggggCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCtt < 2:2402750/138‑1 (MQ=11) ggggCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCtt > 1:2402750/1‑138 (MQ=11) gggCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAgg < 2:7336433/150‑1 (MQ=31) | GCTCCTACAGGTACGGCGCAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCC‑GGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAGG > NC_002947/1444905‑1445091 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |