| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,469,147 | T→G | 9.4% | Q476P (CAG→CCG) | algX ← | alginate biosynthesis protein AlgX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,469,147 | 0 | T | G | 9.4% | 644.1 / 13.7 | 276 | Q476P (CAG→CCG) | algX | alginate biosynthesis protein AlgX |
| Reads supporting (aligned to +/- strand): ref base T (121/116); new base G (4/29); total (131/145) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.12e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 299 total aligned reads displayed.
TCACCGGTCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGG > NC_002947/1468998‑1469296 | tCACCGGTCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGgcc‑tgcct > 1:65378/1‑150 (MQ=255) cGGTCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGCGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTgcgc < 2:3409397/150‑1 (MQ=255) cGGTCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTgcgc < 1:3050355/150‑1 (MQ=255) ggTCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGcgcg < 1:1751182/150‑1 (MQ=255) ggTCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGcgcg < 2:6360939/150‑1 (MQ=255) cTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTc < 2:1394415/150‑1 (MQ=255) ttGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCt > 2:7295746/1‑150 (MQ=255) ttGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCt > 2:4447087/1‑150 (MQ=255) tGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTg > 2:4007997/1‑150 (MQ=255) gAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACACGGCCAACTCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTgc < 2:1083892/150‑1 (MQ=255) gAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTgc > 2:5328698/1‑150 (MQ=255) gAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTgc > 1:3413797/1‑150 (MQ=255) gAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTgc < 1:2293627/150‑1 (MQ=255) ttttCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAg > 1:6259156/1‑150 (MQ=255) ttttCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAg > 2:7192416/1‑150 (MQ=255) tCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCAGACCGCGCAGGCa < 2:1245211/150‑1 (MQ=255) cGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCGTGCCTGCGCAGACCGCGCAGGCa < 2:2456454/150‑1 (MQ=255) gATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCGTGCCTGCGCAGACCGCGCAGGCag < 2:5612959/150‑2 (MQ=255) aTCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCG‑TGCCTGCGCAGACCGCGCAGGCaggc < 1:3727842/150‑4 (MQ=255) ccTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGaa > 1:1658592/1‑150 (MQ=255) ccTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGaa > 1:3516131/1‑150 (MQ=255) ccTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGaa > 2:1009454/1‑150 (MQ=255) ccTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCGGCGCGGTCTGCGCAGGCACGGCGaa > 1:922847/1‑150 (MQ=255) cTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAg > 2:3912391/1‑150 (MQ=255) tGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGTGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAgt > 1:1870458/1‑150 (MQ=255) tGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAgt > 1:1396565/1‑150 (MQ=255) aCCCTGCGGGGGTACCAGCGCGGCGTGCGCGGCACAACAAAACAAGCCAAACGCGAGCAGGGGGGGGCTGAAAATTCTTTTTAAAAGGGTATTGGGTCGCCTCACTGGCC‑TGCCTGCGCGTTCTGCGCAGGCACGGCGAAGTTGTTGCGt < 2:3952112/150‑1 (MQ=255) ccTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGttt > 1:6692427/1‑150 (MQ=255) tGCGGCGGTACCCGCGCGGCGTGCGCGGCACCACCAACCACGGCCAACGCGAGCTGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑GGCCTGCGCGTTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGc < 2:7432966/150‑1 (MQ=255) tGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGc > 2:2960163/1‑150 (MQ=255) tGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGc > 1:2574539/1‑150 (MQ=255) cggTCCCCGCGCGGGGGGCGCGGCACCCCCAACCACGGCCACCGCGCGCCGGGGGGGGCTGTAAATTGGTTTGAAACGGGTCCGGGGTCGCCCCCCTGGCC‑TGCCGGCGGGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGc < 2:6303851/150‑1 (MQ=255) cggAACCCGCGCGGGGTGCGCGGCACCACAAACCACCGCCACCGCGCGCTGGGGGGGGCTGTAAATTCGTTTGAAAAGGGTCATGGGCCGCCTCACGGGCC‑TGCCTGCGCGGTCGGCGCCGCCACGGCGAAGTTGTTGCGTTTGCAGAGc < 2:1945075/150‑1 (MQ=255) ggTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTTTTGGGTTTGCatagat > 2:4807668/1‑148 (MQ=255) gtccctgcggGGCGTGGGCGCCACCACAAAAAACGGCAAAGGGGCGCTGGGGGGGGGTGTAATTTCTTTTTAAATGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGGGGTCGGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCtt < 1:6066645/144‑1 (MQ=255) cAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCt > 1:3165567/1‑150 (MQ=255) gcggcgTGCGCGGCACCACAAAACACGCCCACCGCGAGCCGGGCGGGGCTGTAAATTCGTTTGAAATGGGTCAGGGGTCGCCACCCGGCCC‑TGCCTGCGCGGTCTGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGa < 2:4603963/150‑1 (MQ=255) cggcggGCGCGGCACCACCAAACACGGCCACCGCGAGCTGGGCGGGGGTGTAAATTCGTTTGAAATGGGTCTTGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGAc < 2:4901998/150‑1 (MQ=255) cgTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCtt > 2:6708426/1‑150 (MQ=255) tGCGCGGCACCCCCAAACACGGCCACCGCGAGCAGGGGGGGGCTGTAAATTCGTTTGAAATGGGTCTTGGGGCGCCCCAGGGGCC‑GGCCTGCGCGGTCGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCt < 1:4844219/150‑1 (MQ=255) tGCGCGGCACCACCAAACAAGGCAAAGGCGTGCTGGGCGGGGCTGTAATTTCTTTTGAAAAGGGTCTTGGGTCGCATCACTGGCC‑GGCCTGCGCGGTCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCt < 2:5993898/150‑1 (MQ=255) cgcgGCACCCCAAAACAAGGCCAACGCGAGCTGGGCGGGGCTGTAAATTCGTTTGAAAAGGGTCTTGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGGGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTgg < 2:5537958/150‑1 (MQ=255) cgcgGCACCACCAAACACGGCCACCGCGAGCTGGGCGGGGCTGTAATTTCTTTTGAAAAGGGTCTTGGTTCGCCTCACGGGCC‑TGCCTGCGCGGTCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTgg < 2:6140903/150‑1 (MQ=255) cgcgGCACCACCAAACACGGCCAACGCGCGCTGGGCGGGGCTGGAAATTCGTTTGAAACGGGTCATGGGTCGCCTCAGTGGCC‑TGCGTGCGGGGTCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTgg < 2:1151412/150‑1 (MQ=255) cgcgGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTgg > 2:237000/1‑150 (MQ=255) cgcgGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTgg > 2:2927825/1‑150 (MQ=255) cgcgGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAAGTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCGGCGCGGTCGGCGCCGGCACGGCCAAGGTGTTGCGTTTGCAGAGCTTGGCGTCGACCAGCTgg > 1:4474277/1‑150 (MQ=255) ggCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCCTACTTGTTGCGTTTGCAGAGGATGGCAGCGACCGTCTGGGTg > 1:5786025/1‑150 (MQ=255) ccaccacCAAACACGCCCACCGCGAGCTGGGGGGGGGTGTAATTTCGTTTCAAAAGGGTCAGGGGTCGCCCCACGGGCC‑GGCCTGCGGGGTCGGCCCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGc < 2:2623537/149‑1 (MQ=255) ccaAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCGGCGCGGTCTGCGCAGGCACGGCGGAGTTGTTGGGGTTTCAGAGCTTGGCGTCGACCATCTGGGTGGCGCgtt > 1:6832517/1‑150 (MQ=255) aaccacggCCACCGCGCGCCGGGGGGGGCTGTAAATTCTTTTGAAAGGGGTCTGGGGTCGCCTCAGGGGCC‑GGCCGGCGGGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTcc < 2:7057520/144‑1 (MQ=255) aCAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCgg > 2:1291210/1‑150 (MQ=255) catgcccAACGGGAGCCGGGGGGGGCTGTTAATTCTTTTGAAAAGGGCCTTGTGCCCCCTAACTGGCG‑GGCCGGCGCTTCCGGGGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGTCTTCGACCTTCTGGGTGCCGCTTTCCGGc < 2:1733078/145‑1 (MQ=255) gCCAACGCGAGCCGGGGGGGGCTGGAAATTCGTTTGAAATGGGTCCTGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCt < 1:2169367/150‑1 (MQ=255) gCCAACGCGAGCAGGGCGGGGCTGGAAATTCTTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGGCTGCGCCGTCTGCGCAGGCACGGCCAAGGTGTTGCGTTTTCAGAGCATGGCTTCCAACTTATGGGTGCCGCTTTACGGCCCCt > 1:5212912/1‑150 (MQ=255) gCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCt > 1:4099464/1‑150 (MQ=255) cccAACGCGAGCAGGGGGGGGCTGGAATTTGGTTTGAAAAGGGTCTGGGGTCGCCTCCCGGGCC‑TGCCGGGGCGGTCGGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCt < 2:5905710/149‑1 (MQ=255) caccgcgcgcgGGGGGGGGCTGTAAATTCGTTTGAAACGGGCCTTGGGTCGCCGCAGGGGCC‑GGCGTGCGCGGTGTGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGt < 2:3111851/147‑1 (MQ=255) ctaGCTGGGGGGGGCTGGAAATTCTTTTCAAAAGGTTCATGGGTCGCCTCACTGGCC‑GGCCTGCGGGTTATGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTc < 1:4304142/148‑1 (MQ=255) cgAGCTGGGCGGGGCGGTAAATGCGTTTGAAAAGGGTCTTGGGGCGCCTCACGGGCC‑GGCCTGCGCGGTCGGCTCTGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTc < 2:4133715/150‑1 (MQ=255) cgAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTc > 2:3524620/1‑150 (MQ=255) cAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAAc > 2:5960031/1‑150 (MQ=255) tgggCGGGGCTGGAATTGCGTTTGAAACGGGTCTGGGGGCGCCTCACTGGCC‑TGCCTGCGCGGTCGGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAAcg < 2:5035063/149‑1 (MQ=255) ggCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAAcgcg > 1:536006/1‑150 (MQ=255) ggggggGTGTAATTTCTTTTTAATTGGGTCTGGGGGCGCCGCCCGGGCG‑GGCGTGGGGGGTGTGCCCCGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGa < 1:2470035/148‑1 (MQ=255) ggggggGTGGAATTTCGTTTGAAATGGGTCATGGGGCGCCTCACTGGCC‑GGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGa < 2:5739472/148‑1 (MQ=255) ggggggCTGCAATTTCTTTTGAAATGGGTCAGGGGTCGCCCCAGTGGCC‑GGCCGGCGGGGGCGGCGCCGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGa < 1:1631681/148‑1 (MQ=255) gCGGGGCTGGAATTTCGTTTGAAATGGGTCTTGGGTCGCCGCCCGGGCG‑TGCCTGCGGGGTCGGCGCAGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGa < 2:2126436/150‑1 (MQ=255) ggtgtaaaTTCTTTTTAAATGGGTCTTGGGTCGCCTCACGGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAgg < 2:152268/145‑1 (MQ=255) cTGTAAATTCGTTTGAACAGGGTCATGGGTCGCCTCACTGGCC‑TGCCGGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGgc < 2:4198753/150‑1 (MQ=255) tGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAGGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGgcg > 2:1695835/1‑150 (MQ=255) ggAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCACAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGgcgc < 2:6231293/150‑1 (MQ=255) aTTCGTTTCAAATGGGTCTGGGGCCGCCTCAGTGGCC‑GGCGGGGGCGGAGTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCgctggc < 1:7040886/150‑1 (MQ=255) ttCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCgctggct > 1:1110292/1‑150 (MQ=255) tggTTTTAAATGGGTCTGGGGTCGCCTCCCGGGCC‑TGCCGGCGCGGCCGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCgctggctg < 2:1830103/148‑1 (MQ=255) gTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCAGCGCGGTCTGCGCAGGCACCGCCAACTTGTTGCGTTTGCACAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCCGCCCCGGTACCTCGAACGCGCGCAGGCGCgggctggc > 1:4365435/1‑150 (MQ=255) tttGAAAAGGGTAATGGGTCTACTCACTGGCC‑TGCAAGGGCGGTCAGAGAAGGAAAGGACAATTTGTTTGGTTTGAAGATCTTTGATTCGACCTTCTGGGTGCCGCTTTAAGGACCCTGTACCTCGAAAGCGAGAAGGAgctggcagtcc > 2:6271735/1‑145 (MQ=255) ttaaaaGGGTCATGGGTCGCCTCACGGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCa < 2:5802936/148‑1 (MQ=255) gAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAg > 2:5466076/1‑150 (MQ=255) aacgggTCATGGGGCGCCTCACGGGCG‑GGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTc < 2:2870520/147‑1 (MQ=255) aaaGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGGAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTc < 1:3905143/150‑1 (MQ=255) aaGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGGAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCAGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTcc > 1:6908721/1‑150 (MQ=255) aaGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCAGACCGCGCAGGCag < 2:6613954/50‑2 (MQ=21) gTCTTGGGTCGCCTCACGGGCC‑GGCCTGCGCGGTCTGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGt < 2:64792/150‑1 (MQ=255) gTCTTGGGCCGCCTCAGGGGCC‑TGCGTGGGGGGCCTGCGCTGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGt < 1:733895/150‑1 (MQ=255) aTGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGGAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCGTCTGGGTGCCGCGTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCGGGCTGGCCCCGTCCGCGTCtt > 1:4178785/1‑150 (MQ=255) gggTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTACGGCCCCTGTACCACGAACGCGAGCCGGCGCAGGCTGGCCCAGTCCACGTCTTcg > 1:3800889/1‑150 (MQ=255) gggCCGCCTCACTGCCC‑GGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTcg < 2:1974794/150‑1 (MQ=255) ggTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTcgc < 2:6914025/150‑1 (MQ=255) gCCTCACGGGCG‑GGCCGGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCAt < 2:7174674/150‑1 (MQ=255) tCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTACGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTg > 2:4633821/1‑150 (MQ=255) cACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTgg < 1:2896076/150‑1 (MQ=255) ggggCG‑TGCGTGCGGGGTCGGCGCCGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGaa < 1:5605628/148‑1 (MQ=255) cTGGCG‑TGCCGGCGCGGCCGGCCCAGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGaa < 1:335743/150‑1 (MQ=255) cTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGaa < 2:2907929/150‑1 (MQ=255) ggCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGa > 1:2966311/1‑150 (MQ=255) c‑tgcctgcGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGa > 1:1004704/1‑150 (MQ=255) c‑tgcctgcGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGa > 1:6162561/1‑150 (MQ=255) c‑tgcctgcGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGa > 1:1515036/1‑150 (MQ=255) tgcGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCgg > 2:369086/1‑150 (MQ=255) | TCACCGGTCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGG > NC_002947/1468998‑1469296 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |