| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,469,154 | T→A | 6.2% | T474S (ACC→TCC) | algX ← | alginate biosynthesis protein AlgX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,469,154 | 0 | T | A | 6.2% | 737.8 / 29.9 | 290 | T474S (ACC→TCC) | algX | alginate biosynthesis protein AlgX |
| Reads supporting (aligned to +/- strand): ref base T (139/121); new base A (3/13); total (146/144) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.74e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.63e-02 | |||||||||||
Only 100 of 294 total aligned reads displayed.
TCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCGG > NC_002947/1469005‑1469303 | gAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTgc < 1:2293638/150‑1 (MQ=255) cTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAACGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTAATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCa < 2:7126555/150‑1 (MQ=255) ttttCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAg > 2:7040886/1‑150 (MQ=255) tCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCa < 2:6201952/150‑1 (MQ=255) tCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCAGACCGCGCAGGCa < 1:3493249/150‑1 (MQ=255) tCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCAGACCGCGCAGGCa < 2:6110965/150‑1 (MQ=255) cGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCGTGCCTGCGCAGACCGCGCAGGCa < 2:2456454/150‑1 (MQ=255) ccccTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCAGACCGCGCAGGCaggcca < 2:5946753/150‑6 (MQ=255) ccTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGACATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGaa > 1:5744697/1‑150 (MQ=255) ccTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGaa > 2:1009553/1‑150 (MQ=255) ccTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGaa > 1:1658592/1‑150 (MQ=255) ccTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGaa > 1:6102510/1‑150 (MQ=255) ccTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGGGCGCGGCACCACCAAACCCGGCCAAGGCGAGCGGGGGGGGGGTGGAAATTGGTTGGAAACGGGTCATGGGTCGCCTCCCGGGCC‑TGCCGGCGCGGTCGGCGCAGGCACGGCGaa < 2:7297139/150‑1 (MQ=255) cTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAg > 2:3912398/1‑150 (MQ=255) tGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCGCTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAgg > 1:3297164/1‑149 (MQ=255) tGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAgt > 1:1396565/1‑150 (MQ=255) tagtaACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCCGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCAGGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAgttgt > 2:5237667/1‑150 (MQ=255) attaACCCTGCGGCGTTACCAGCGCGGCGTGCGCGGCACCACAAAACAACCCCAACGCTAGCAGGGCGGGGCTTTAAATTCTTTTTAAATGGGTAATGGCTCCCCTAACTGGCC‑TGCATGCGCGTTATGCGAAGCCACGGCGAAgttgtt < 2:5503486/148‑1 (MQ=255) ccTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGttt > 2:4034040/1‑150 (MQ=255) cTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTg > 2:7184781/1‑150 (MQ=255) tGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGc > 1:2574539/1‑150 (MQ=255) tGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGc > 2:2960163/1‑150 (MQ=255) tGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGc > 1:5922452/1‑150 (MQ=255) gcggcgGTACCAGCGCGGCGTGCGCGGCACCACCAAACACGGCCAACGCGAGCCGGGGGGGGCTGGAAATTCGTTTGAAAAGGGTCTTGGGTCGCCGCACGGGCC‑GGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCa < 2:5987666/150‑1 (MQ=255) ggggggTACCAGGGGGGGGGGCGCGGCACCACCAAACACGGCAAACGCTTGCTGGGCGGGGCTGTAAATTGTTTTTAAATGGGTCTTGGGTCGCCTCACTGGCC‑TGCCTGCGGGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCag < 1:5508129/146‑1 (MQ=255) cggAACCCGCGCGGGGTGCGCGGCACCACAAACCACCGCCACCGCGCGCTGGGGGGGGCTGTAAATTCGTTTGAAAAGGGTCATGGGCCGCCTCACGGGCC‑TGCCTGCGCGGTCGGCGCCGCCACGGCGAAGTTGTTGCGTTTGCAGAGc < 2:1945075/150‑1 (MQ=255) gTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTTCAGAGCtt > 1:2484551/1‑150 (MQ=255) aCCTGCGCGGCGTGCGCGGCACCACAAACCATGGCCACCGCGAGCTGGGCGGGGCTGGAAATTCTTTTTAAATGGGTCTGGGGCCGCCTCACTGGCG‑TGCCTGCGCGTTCGGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTgg < 1:4926696/150‑1 (MQ=255) cctgcggggcgggCGCGCCCCCACCAAACACGGCAACCGGGCGCGGGGGGGGGGTGTTATTTGTTTTTACATGGGTCATGGTTCGCCTCAGTGGCC‑TGCCGGGGGGGTCTGGGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGc < 2:3983133/147‑1 (MQ=255) cccgcgcGGCGTGCGCGGCACCCCCAAACACGGCCACCGCGCGCCGGGCGGGGCTGCAAATTCTTTTGAAACGGGTCTTGGGTCGCCTCACTGGCC‑TGCCGGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGc < 2:1085581/147‑1 (MQ=255) ccAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCAGGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGc > 2:6843825/1‑150 (MQ=255) gcgcGGGGGGCGCGGCACCACCAAACACGGCCACCGCGCGCGGGGGGGGGCTGGAAATTGTTTTGAAATGGGTCAGGGGTCGCCTCCCGGGCC‑GGCCTGCGCGGTCTGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTc < 2:1599123/150‑1 (MQ=255) ggggggggcgcGGCACCACCAAACACGGCCACCGCGAGCCGGGGGGGGCTGTAAATTCTTTTGAAATGGGCCTGGGGGCGCCTCAGTGGCC‑TGCCTGCGGGGTCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGa < 1:3007174/143‑1 (MQ=255) gcggcgTGCGCGCCCCCACCAAACAAGGCCAACGCGTGCCGGGGGGGGCTGTAATTTCGTTTGAAATGGGTCATGGGTCGCCTCACTGGCC‑GGCGTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGa < 2:4562671/150‑1 (MQ=255) cggcgTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCGGCGCGGTCTGCGCAGGCACGGCGCAGGTGTTGCGTTTGCAGAGCTTGGCTTCGAc > 1:3542277/1‑150 (MQ=255) gTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTc > 2:5413304/1‑150 (MQ=255) gcgcGGCACCACCAAACACGCCCAAGCCGCGCCGGGCGGGGCTGGAAAGTCGTTTGAAACGGGTCTTGGGCCGCCACACGGGCG‑GGCCGGCGCGGACTGCGCAGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTg < 2:5668552/150‑1 (MQ=255) cgcgGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTgg > 2:237000/1‑150 (MQ=255) cgcgGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTgg > 2:2927825/1‑150 (MQ=255) cgcgGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAAGTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCGGCGCGGTCGGCGCCGGCACGGCCAAGGTGTTGCGTTTGCAGAGCTTGGCGTCGACCAGCTgg > 1:4474277/1‑150 (MQ=255) ccaccacCAAACACGCCCACCGCGAGCTGGGGGGGGGTGTAATTTCGTTTCAAAAGGGTCAGGGGTCGCCCCACGGGCC‑GGCCTGCGGGGTCGGCCCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGc < 2:2623537/149‑1 (MQ=255) accaccAAACCAGGCCACCGCGAGCCGGGCGGGGCTGTAATTTCGTTTGAAACGGGTCATGGGTCGCCTCCCTGGCC‑GGCGTGCGGGGTCGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCg < 2:6333830/150‑1 (MQ=255) caccaAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCt > 2:1315916/1‑150 (MQ=255) caccaAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCt > 2:6648758/1‑150 (MQ=255) aaaCAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTcc > 1:1768024/1‑150 (MQ=255) ccgCCACCGGGCGCGGGGGGGGGCTGTAAATTCTTTTGAAATGGTTCTGGGGTCGCCTCCTTGGCG‑GGCGTGGGCGGTGGGCGCGGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGccc < 1:6385845/148‑1 (MQ=255) gCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCt > 1:4099464/1‑150 (MQ=255) cccAACGCGAGCAGGGGGGGGCTGGAATTTGGTTTGAAAAGGGTCTGGGGTCGCCTCCCGGGCC‑TGCCGGGGCGGTCGGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCt < 2:5905710/149‑1 (MQ=255) caccgcgcgcgGGGGGGGGCTGTAAATTCGTTTGAAACGGGCCTTGGGTCGCCGCAGGGGCC‑GGCGTGCGCGGTGTGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGt < 2:3111851/147‑1 (MQ=255) ctaGCTGGGGGGGGCTGGAAATTCTTTTCAAAAGGTTCATGGGTCGCCTCACTGGCC‑GGCCTGCGGGTTATGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTc < 1:4304142/148‑1 (MQ=255) cgcgccggggggggCTGTAATTTTGTTTTAAACGGGTCTTGGGTCGCCTCACGGGCC‑TGCCGGGGGGGTCGGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTc < 2:1253324/144‑1 (MQ=255) cgAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTc > 2:3524620/1‑150 (MQ=255) cgggggggggCTGGAATTGCGTTTTAAATGGGTCTGGGGGCGCCTCCCGGGGG‑GGCGGGGGGGGTGGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAAc < 1:767698/148‑1 (MQ=255) ggggggCTGCAATTTCTTTTGAAATGGGTCAGGGGTCGCCCCAGTGGCC‑GGCCGGCGGGGGCGGCGCCGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGa < 1:1631681/148‑1 (MQ=255) gCGGGGGTGTAACTTGGTTTGAAACGGGTCATGGGTCGCCTCACGGGCC‑GGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGa < 2:5739505/150‑1 (MQ=255) gCGGGGCTGGAATTTCGTTTGAAATGGGTCTTGGGTCGCCGCCCGGGCG‑TGCCTGCGGGGTCGGCGCAGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGa < 2:2126436/150‑1 (MQ=255) gCTGTAAATTGTTTTGAAAGGGGTCAGGGGTCGCCTCCGTGGCC‑GGCCTGCGCGGGCTGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAgg < 2:152105/150‑1 (MQ=255) actgcgattGAACTGGGTCATGGGCCGCCTCCCGGGCC‑GCCCTGCGCGGTCTGGGCTGGCACGGCGACGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCgctgg < 2:743315/143‑1 (MQ=255) ttCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCgctggct > 1:1110292/1‑150 (MQ=255) ttCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCgctggct > 2:1167595/1‑150 (MQ=255) tggTTTTAAATGGGTCTGGGGTCGCCTCCCGGGCC‑TGCCGGCGCGGCCGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCgctggctg < 2:1830103/148‑1 (MQ=255) gTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCAGCGCGGTCTGCGCAGGCACCGCCAACTTGTTGCGTTTGCACAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCCGCCCCGGTACCTCGAACGCGCGCAGGCGCgggctggc > 1:4365435/1‑150 (MQ=255) gTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCAGCGCGGTCAGCGCAGGCAACGCGCAGGTGTTTCGTTTTCAGAGCATGGCTTCGACCGTCGGGGTGCCGCTTTCCCGCCCCAGTACCTCGAAACCCAGCAGGCGCgggctggc > 1:6848546/1‑150 (MQ=255) tttGAAATGGGTCATGGGTCGCCTCCCTGGCC‑GGCCGGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGcc < 2:481281/150‑1 (MQ=255) tttGAAACGGGCCTGGGGCCCCCCCCCGGGCC‑TGCGTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGcc < 2:650777/150‑1 (MQ=255) tttGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACCGCGCAGTTGTTTCGTTTGCAGAGCTTGGCTTCGACCGTCTGGGTTCCGCATTCCGGCCCCAGTACCACGAAACCGAGCAGGCGCTGGCTGGcc > 1:1904968/1‑150 (MQ=255) ttGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGccc > 2:1773724/1‑150 (MQ=255) ttaattgggTCTGGGGCCGCCTCCGTGGCC‑GGCCGGCGGGGTCGGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCa < 1:67988/144‑1 (MQ=255) gAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAg > 2:5554103/1‑150 (MQ=255) gAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCGGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTAGACCATCTGGGTGCCGCTTTCCGGCCCCAGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAg > 1:969857/1‑150 (MQ=255) gAAAAGGGTCATGGGACGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGCCCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAg > 2:4213329/1‑150 (MQ=255) aacgggTCATGGGGCGCCTCACGGGCG‑GGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTc < 2:2870520/147‑1 (MQ=255) aaaGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGGAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTc < 1:3905143/150‑1 (MQ=255) aaGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTcc > 1:6203385/1‑150 (MQ=255) aaGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCAGACCGCGCAGGCag > 1:6613954/1‑49 (MQ=21) gTCATGGGTCGCCGCACTGGCC‑GGGCGGCGGGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGt < 2:7226735/150‑1 (MQ=255) aTGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGGAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCGTCTGGGTGCCGCGTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCGGGCTGGCCCCGTCCGCGTCtt > 1:4178785/1‑150 (MQ=255) gggTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTACGGCCCCTGTACCACGAACGCGAGCCGGCGCAGGCTGGCCCAGTCCACGTCTTcg > 1:3800889/1‑150 (MQ=255) gggCCGCCTCACTGCCC‑GGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTcg < 2:1974794/150‑1 (MQ=255) ggTCGCCTCCCTGGCC‑TGCCTGCGCGGTCGGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTcgc < 2:4147730/150‑1 (MQ=255) ggTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTcgc < 2:4902868/150‑1 (MQ=255) gCCTCACGGGCC‑GGCCTGCGGGGTCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCAt < 2:4735498/150‑1 (MQ=255) cACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTgg < 1:2896076/150‑1 (MQ=255) cTGGCG‑TGCCGGCGCGGCCGGCCCAGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGaa < 1:335743/150‑1 (MQ=255) cTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGaa < 2:2907929/150‑1 (MQ=255) gcc‑ggcctGCGGGTTCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGAc < 1:7192416/150‑1 (MQ=255) ccgtgccagcGCAGACCGCCCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCGTGGCTTCGACCATCTGGGTGCCGCTTTCCGGCCCCGGTACCTCGAACGCGCGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATATGGAAGAc > 2:4627840/4‑150 (MQ=255) c‑tgcctgcGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGa > 2:6258487/1‑150 (MQ=255) c‑tgcctgcGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGa > 2:6301522/1‑150 (MQ=255) c‑tgcctgcGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGa > 1:5321729/1‑150 (MQ=255) c‑tgcctgcGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGa > 1:2233414/1‑150 (MQ=255) c‑tgcctgcGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGa > 1:1515036/1‑150 (MQ=255) c‑tgcctgcGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGa > 1:1004704/1‑150 (MQ=255) cctgcGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTcc < 2:1696027/77‑1 (MQ=255) tgcGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCgg > 2:369086/1‑150 (MQ=255) tgcGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCgg > 1:3057227/1‑150 (MQ=255) gcgcGGTCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGc < 2:3413797/150‑1 (MQ=255) cgggttCTGCGCAGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGcc < 1:2960163/145‑1 (MQ=255) gggTGTGCGCGGGCACGGCGAAGTTGTTGCTTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGt < 1:6953537/149‑1 (MQ=255) gTCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCg < 2:3891767/150‑1 (MQ=255) | TCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCGG > NC_002947/1469005‑1469303 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |