| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,469,156 | T→G | 8.8% | Q473P (CAG→CCG) | algX ← | alginate biosynthesis protein AlgX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,469,156 | 0 | T | G | 8.8% | 661.0 / 5.8 | 288 | Q473P (CAG→CCG) | algX | alginate biosynthesis protein AlgX |
| Reads supporting (aligned to +/- strand): ref base T (134/105); new base G (4/29); total (143/145) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.26e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 294 total aligned reads displayed.
TTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCGGTG > NC_002947/1469007‑1469305 | ttGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCt > 2:4447087/1‑150 (MQ=255) tGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTg > 2:4007997/1‑150 (MQ=255) tGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTg > 2:2404971/1‑150 (MQ=255) gAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTgc > 1:3413797/1‑150 (MQ=255) gAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTgc < 1:2293627/150‑1 (MQ=255) cTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCa < 1:4296111/150‑1 (MQ=255) cTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAACGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTAATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCa < 2:7126555/150‑1 (MQ=255) ttttCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAg > 2:7040886/1‑150 (MQ=255) tCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCa < 2:6201952/150‑1 (MQ=255) tCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCAGACCGCGCAGGCa < 2:6110965/150‑1 (MQ=255) tCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCAGACCGCGCAGGCa < 1:3843242/150‑1 (MQ=255) tCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGc > 2:3364705/1‑150 (MQ=255) ccccTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCAGACCGCGCAGGCaggcca < 2:5946753/150‑6 (MQ=255) ccTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGaa > 2:1009553/1‑150 (MQ=255) ccTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGaa > 1:3516131/1‑150 (MQ=255) ccTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGGGCGCGGCACCACCAAACCCGGCCAAGGCGAGCGGGGGGGGGGTGGAAATTGGTTGGAAACGGGTCATGGGTCGCCTCCCGGGCCTGCCGGCGCGGTCGGCGCAGGCACGGCGaa < 2:7297139/150‑1 (MQ=255) cTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAg > 1:1596582/1‑150 (MQ=255) cTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAg > 2:3912391/1‑150 (MQ=255) tGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGTGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAgt > 1:1870458/1‑150 (MQ=255) tGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCGCTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAgt > 1:3297293/1‑150 (MQ=255) attaACCCTGCGGCGTTACCAGCGCGGCGTGCGCGGCACCACAAAACAACCCCAACGCTAGCAGGGCGGGGCTTTAAATTCTTTTTAAATGGGTAATGGCTCCCCTAACTGGCCTGCATGCGCGTTATGCGAAGCCACGGCGAAgttgtt < 2:5503486/148‑1 (MQ=255) aCCCTGCGGGGGTACCAGCGCGGCGTGCGCGGCACAACAAAACAAGCCAAACGCGAGCAGGGGGGGGCTGAAAATTCTTTTTAAAAGGGTATTGGGTCGCCTCACTGGCCTGCCTGCGCGTTCTGCGCAGGCACGGCGAAGTTGTTGCGt < 2:3952112/150‑1 (MQ=255) cccTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGGCTGCGCACGCACGGCGAAGGTGTTGCgat > 1:3733044/1‑148 (MQ=255) ccggcggcgGTACCCGGGCGGGGTGCGCGGCACCCCACAACACGGCCACCGCGAGCGGGGCGGGGGTGGAACTTCGTTTTAAACGGGTCATGGGTGGCCTCACGGGCCTGCCTGCGCGTTCTGCGCTGGCACGGCGAAGTTGTTGCGttt < 2:1682225/147‑1 (MQ=255) ccTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGCGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGttt > 2:2896076/1‑150 (MQ=255) cTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTg > 2:7184781/1‑150 (MQ=255) tGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGc > 2:2959870/1‑150 (MQ=255) tGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGGTTGc > 1:2574457/1‑150 (MQ=255) gcggcgGTACCAGCGCGGCGTGCGCGGCACCACCAAACACGGCCAACGCGAGCCGGGGGGGGCTGGAAATTCGTTTGAAAAGGGTCTTGGGTCGCCGCACGGGCCGGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCa < 2:5987666/150‑1 (MQ=255) cggAACCCGCGCGGGGTGCGCGGCACCACAAACCACCGCCACCGCGCGCTGGGGGGGGCTGTAAATTCGTTTGAAAAGGGTCATGGGCCGCCTCACGGGCCTGCCTGCGCGGTCGGCGCCGCCACGGCGAAGTTGTTGCGTTTGCAGAGc < 2:1945075/150‑1 (MQ=255) ggTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTTTTGGGTTTGCatagat > 2:4807668/1‑148 (MQ=255) gtccctgcggGGCGTGGGCGCCACCACAAAAAACGGCAAAGGGGCGCTGGGGGGGGGTGTAATTTCTTTTTAAATGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGGGGTCGGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCtt < 1:6066645/144‑1 (MQ=255) tACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTTCAGAGCTTg > 1:122304/1‑150 (MQ=255) cccgcgcGGCGTGCGCGGCACCCCCAAACACGGCCACCGCGCGCCGGGCGGGGCTGCAAATTCTTTTGAAACGGGTCTTGGGTCGCCTCACTGGCCTGCCGGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGc < 2:1085581/147‑1 (MQ=255) ccAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCAGGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGc > 2:6843825/1‑150 (MQ=255) cAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCt > 1:3165567/1‑150 (MQ=255) gcggcgTGCGCGGCACCACAAAACACGCCCACCGCGAGCCGGGCGGGGCTGTAAATTCGTTTGAAATGGGTCAGGGGTCGCCACCCGGCCCTGCCTGCGCGGTCTGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGa < 2:4603963/150‑1 (MQ=255) cggcggGCGCGGCACCACCAAACACGGCCACCGCGAGCTGGGCGGGGGTGTAAATTCGTTTGAAATGGGTCTTGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGAc < 2:4901998/150‑1 (MQ=255) gTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTc > 2:5413304/1‑150 (MQ=255) tGCGCGGCACCCCCAAACACGGCCACCGCGAGCAGGGGGGGGCTGTAAATTCGTTTGAAATGGGTCTTGGGGCGCCCCAGGGGCCGGCCTGCGCGGTCGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCt < 1:4844219/150‑1 (MQ=255) tGCGCGCCACCACAAAACACGGCCACCGCGCGCCGGGGGGGGCTGGAATTTCTTTTTAAACGGGTCATGGGTCGCCTCCCTGGCCGGCCTGCGGGGTCTGCGCAGGCACGACGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCt < 2:3702902/150‑1 (MQ=255) gcgcGGCACCACCAAACACGCCCAAGCCGCGCCGGGCGGGGCTGGAAAGTCGTTTGAAACGGGTCTTGGGCCGCCACACGGGCGGGCCGGCGCGGACTGCGCAGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTg < 2:5668552/150‑1 (MQ=255) ggCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCCTACTTGTTGCGTTTGCAGAGGATGGCAGCGACCGTCTGGGTg > 1:5786025/1‑150 (MQ=255) gCACCACCAAACACGCCCACCGCGCGCGGGGCGGGGCTGTAAATTCTTTTGAAATGGGTCTGGGGTCGCCTCCCGGGCCTGCGTGCGGGGTCTGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGc < 2:2739447/150‑1 (MQ=255) accaccAAACCAGGCCACCGCGAGCCGGGCGGGGCTGTAATTTCGTTTGAAACGGGTCATGGGTCGCCTCCCTGGCCGGCGTGCGGGGTCGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCg < 2:6333830/150‑1 (MQ=255) accacaAAACACGCCCACCGCGCGCGGGGGGGGGCTGTAATTTCTTTTCAAATGGGACATGGGTCGCCTCACGGGCCGGCCGGCGCGGTCTGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCg < 2:2584614/150‑1 (MQ=255) caccaAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCt > 2:6648758/1‑150 (MQ=255) caccaAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCt > 2:1315916/1‑150 (MQ=255) caccaAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGACACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCt > 1:1481051/1‑150 (MQ=255) aaCAAGGCCAACGCGAGCCGGGGGGGGCTGGAATTTCGTTTTAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCg < 2:2912922/150‑1 (MQ=255) catgcccAACGGGAGCCGGGGGGGGCTGTTAATTCTTTTGAAAAGGGCCTTGTGCCCCCTAACTGGCGGGCCGGCGCTTCCGGGGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGTCTTCGACCTTCTGGGTGCCGCTTTCCGGc < 2:1733078/145‑1 (MQ=255) ccgCCACCGGGCGCGGGGGGGGGCTGTAAATTCTTTTGAAATGGTTCTGGGGTCGCCTCCTTGGCGGGCGTGGGCGGTGGGCGCGGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGccc < 1:6385845/148‑1 (MQ=255) gCCAACGCGAGCCGGGGGGGGCTGGAAATTCGTTTGAAATGGGTCCTGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCt < 1:2169367/150‑1 (MQ=255) gCCAACGCGAGCAGGGCGGGGCTGGAAATTCTTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGGCTGCGCCGTCTGCGCAGGCACGGCCAAGGTGTTGCGTTTTCAGAGCATGGCTTCCAACTTATGGGTGCCGCTTTACGGCCCCt > 1:5212912/1‑150 (MQ=255) gCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTTCGTTTGCAGATCTTTGGTTCGACCTTCTTGGTGCCGCTTTACGGCCCCt > 1:4098551/1‑150 (MQ=255) gCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCt > 1:6165822/1‑150 (MQ=255) cccAACGCGAGCAGGGGGGGGCTGGAATTTGGTTTGAAAAGGGTCTGGGGTCGCCTCCCGGGCCTGCCGGGGCGGTCGGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCt < 2:5905710/149‑1 (MQ=255) caccgcgcgCTGGGGGGGGCTGTAATTTCTTTTTAAATGGGTCTTGGGTCGCCCCACTGGCCTGCGTGGGGGGTCTGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGt < 2:3111835/147‑1 (MQ=255) cAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTCCGCGGTCTGCGAAGGCACGGCGAAGTTGTTGCGTTTGAATAGCATGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGt > 1:4133715/1‑150 (MQ=255) aCGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTAc > 2:360774/1‑150 (MQ=255) aCGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTAc > 1:1645929/1‑150 (MQ=255) cgcgccggggggggCTGTAATTTTGTTTTAAACGGGTCTTGGGTCGCCTCACGGGCCTGCCGGGGGGGTCGGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTc < 2:1253324/144‑1 (MQ=255) cgAGCTGGGCGGGGCGGTAAATGCGTTTGAAAAGGGTCTTGGGGCGCCTCACGGGCCGGCCTGCGCGGTCGGCTCTGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTc < 2:4133715/150‑1 (MQ=255) cgggggggggCTGGAATTGCGTTTTAAATGGGTCTGGGGGCGCCTCCCGGGGGGGCGGGGGGGGTGGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAAc < 1:767698/148‑1 (MQ=255) tgggCGGGGCTGGAATTGCGTTTGAAACGGGTCTGGGGGCGCCTCACTGGCCTGCCTGCGCGGTCGGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAAcg < 2:5035063/149‑1 (MQ=255) ggCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAAcgcg > 1:536006/1‑150 (MQ=255) ggggggGTGTAATTTCTTTTTAATTGGGTCTGGGGGCGCCGCCCGGGCGGGCGTGGGGGGTGTGCCCCGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGa < 1:2470035/148‑1 (MQ=255) gCGGGGGTGTAACTTGGTTTGAAACGGGTCATGGGTCGCCTCACGGGCCGGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGa < 2:5739505/150‑1 (MQ=255) gCGGGGCTGGAATTTCGTTTGAAATGGGTCTTGGGTCGCCGCCCGGGCGTGCCTGCGGGGTCGGCGCAGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGa < 2:2126436/150‑1 (MQ=255) ggtgtaaaTTCTTTTTAAATGGGTCTTGGGTCGCCTCACGGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAgg < 2:152268/145‑1 (MQ=255) cTGTAAATTCGTTTGAACAGGGTCATGGGTCGCCTCACTGGCCTGCCGGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGgc < 2:4198753/150‑1 (MQ=255) actgcgattGAACTGGGTCATGGGCCGCCTCCCGGGCCGCCCTGCGCGGTCTGGGCTGGCACGGCGACGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCgctgg < 2:743315/143‑1 (MQ=255) ttCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCgctggct > 1:1110292/1‑150 (MQ=255) ttCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCgctggct > 2:1167595/1‑150 (MQ=255) tggTTTTAAATGGGTCTGGGGTCGCCTCCCGGGCCTGCCGGCGCGGCCGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCgctggctg < 2:1830103/148‑1 (MQ=255) gTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCAGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCGTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCtggctggc > 1:4365386/1‑150 (MQ=255) gTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCAGCGCGGTCAGCGCAGGCAACGCGCAGGTGTTTCGTTTTCAGAGCATGGCTTCGACCGTCGGGGTGCCGCTTTCCCGCCCCAGTACCTCGAAACCCAGCAGGCGCgggctggc > 1:6848546/1‑150 (MQ=255) tttGAAACGGGCCTGGGGCCCCCCCCCGGGCCTGCGTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGcc < 2:650777/150‑1 (MQ=255) ttaattgggTCTGGGGCCGCCTCCGTGGCCGGCCGGCGGGGTCGGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCa < 1:67988/144‑1 (MQ=255) ttaaatGGGTCCGGGGCCGCCCCCCGGGCCTGCGGGCGGGGCCGGCGCCGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCa < 1:1731548/148‑1 (MQ=255) gAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAg > 2:5554103/1‑150 (MQ=255) gAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCGGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTAGACCATCTGGGTGCCGCTTTCCGGCCCCAGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAg > 1:969857/1‑150 (MQ=255) aaGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCAGACCGCGCAGGCag > 1:6613954/1‑49 (MQ=21) gTCATGGGTCGCCGCACTGGCCGGGCGGCGGGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGt < 2:7226735/150‑1 (MQ=255) tCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGCAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCCGTCCACGTc > 1:4463745/1‑150 (MQ=255) gggCCGCCTCACTGCCCGGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTcg < 2:1974794/150‑1 (MQ=255) tCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTACGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTg > 2:4633821/1‑150 (MQ=255) gtGGCCTGCGTGCGGGGTCTGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGaa < 1:2886465/149‑1 (MQ=255) ggggCGTGCGTGCGGGGTCGGCGCCGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGaa < 1:5605628/148‑1 (MQ=255) cTGGCCTGCCTGCGCGGTCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGaa < 2:3509712/150‑1 (MQ=255) ggCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGa > 1:2966311/1‑150 (MQ=255) gccggcctGCGGGTTCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGAc < 1:7192416/150‑1 (MQ=255) ctgcctgcGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGa > 1:1004704/1‑150 (MQ=255) ctgcctgcGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGa > 2:6301522/1‑150 (MQ=255) ctgcctgcGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGa > 2:6258487/1‑150 (MQ=255) cgcgGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGcc < 1:2959870/150‑1 (MQ=255) gggTGTGCGCGGGCACGGCGAAGTTGTTGCTTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGt < 1:6953537/149‑1 (MQ=255) cgGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGt > 1:3037144/1‑150 (MQ=255) tGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCGgtg < 2:1703569/150‑1 (MQ=255) tGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCGgtg > 1:6214/1‑150 (MQ=255) | TTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCGGTG > NC_002947/1469007‑1469305 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |