| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,513,039 | T→C | 7.8% | intergenic (+20/+42) | sspB → / ← PP_1322 | ClpXP protease specificity‑enhancing factor/lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,513,039 | 0 | T | C | 7.8% | 759.4 / 34.1 | 243 | intergenic (+20/+42) | sspB/PP_1322 | ClpXP protease specificity‑enhancing factor/lipoprotein |
| Reads supporting (aligned to +/- strand): ref base T (101/122); new base C (12/7); total (113/130) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.55e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 264 total aligned reads displayed.
GGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGCCCAGCAGGTA > NC_002947/1512890‑1513188 | ggAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCggat < 1:6187834/150‑1 (MQ=255)ggAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCggat < 2:6271314/150‑1 (MQ=255) gAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCggatg > 2:1310265/1‑150 (MQ=255) gTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAATGGCGATCCGGATGGATCg > 2:2575084/1‑150 (MQ=255) gTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAAGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCg > 1:1035922/1‑150 (MQ=255) tCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGc > 2:1527646/1‑150 (MQ=255) ttCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑t > 1:4225063/1‑150 (MQ=255) tCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCATCCGGATCGCC‑tt < 1:3771277/150‑1 (MQ=255) gatggatgGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑tttt > 2:6188634/1‑150 (MQ=255) gatggatgGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑tttt > 2:571391/1‑150 (MQ=255) tggatggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCATCCGGATCGCC‑tttttt < 2:4860219/150‑1 (MQ=255) gatggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTtttgt < 1:1003034/150‑1 (MQ=255) gatggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑AATtttgt < 2:4519725/150‑1 (MQ=255) tggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTtttgttt > 1:2655026/1‑150 (MQ=255) tggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTtttgttt < 1:4099958/150‑1 (MQ=255) tggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTtttgttt < 1:3145710/150‑1 (MQ=255) gCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAGGCGATCCATCCGGATCGCC‑tttttttgttact < 1:850189/150‑8 (MQ=38) cgacgaGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGc < 1:5547776/150‑1 (MQ=255) cgacgaGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGc < 2:7284992/150‑1 (MQ=255) acgaGCTGGAAGACGATGATGTGCAGCCGGATGACGAGGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCt < 2:4924311/150‑1 (MQ=255) gCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTcc > 1:3890101/1‑150 (MQ=255) tGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAg < 1:1330861/150‑1 (MQ=255) gAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGACAGTGGTCAAGTAACAAAAAAAGGCGATCCATCCGGATCGCC‑ttt > 2:3868108/1‑130 (MQ=255) gAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGc > 2:4068231/1‑150 (MQ=255) aGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCaa > 1:6354769/1‑150 (MQ=255) cGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCa < 2:2704950/150‑1 (MQ=255) cGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCa < 2:5828063/150‑1 (MQ=255) cGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCa > 2:7166047/1‑150 (MQ=255) cGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCa < 1:4573785/150‑1 (MQ=255) gatgatGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGCTCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCAc > 2:7220713/1‑150 (MQ=255) gatgatGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCAc > 2:6319396/1‑150 (MQ=255) gatgatGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCAc > 1:5760317/1‑150 (MQ=255) gatgatGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCAc > 2:1034149/1‑150 (MQ=255) atgctgTGCAGCCGGATGACGATGGCCCGCCAGACGACGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TATTTTGTTTGGCCTGTCCAGGCAATCACt < 2:6124518/150‑1 (MQ=255) gatgTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGa < 2:5075789/150‑1 (MQ=255) gatgTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGa < 2:1577726/150‑1 (MQ=255) gatgTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGa < 1:1820186/150‑1 (MQ=255) tgtgCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGt < 2:2009685/150‑1 (MQ=255) gtgCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTc > 1:7238849/1‑150 (MQ=255) aGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATc < 1:1456934/150‑1 (MQ=255) cGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGAt < 1:5101488/150‑1 (MQ=255) ggATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGa > 2:1198170/1‑139 (MQ=255) gATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGt > 1:1941075/1‑150 (MQ=255) aTGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTa < 2:438858/150‑1 (MQ=255) aTGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGaa < 1:3486124/150‑1 (MQ=255) tGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAAc > 2:1793221/1‑150 (MQ=255) tGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAAc > 2:5915020/1‑150 (MQ=255) cccGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGc > 2:3295919/1‑150 (MQ=255) cccGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGc > 1:3106139/1‑150 (MQ=255) ccGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCt > 2:5975475/1‑150 (MQ=255) ccGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCt > 2:2788302/1‑150 (MQ=255) ccGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCt > 2:1905556/1‑150 (MQ=255) ccGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCATCCGGATCGCC‑tttttttgtt > 1:2390449/1‑100 (MQ=37) ccAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCACC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGa < 2:4621249/150‑1 (MQ=255) cAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGAc > 1:3323076/1‑150 (MQ=255) ggAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCACTCACTGAGTCAATCGATGTACTCGAACAGCTTGACGAtcttct > 1:4648928/1‑150 (MQ=255) ggAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGAtcttct < 2:354878/150‑1 (MQ=255) gggCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCa > 2:518760/1‑150 (MQ=255) gggCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCa > 1:3574666/1‑150 (MQ=255) cAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAATGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGc > 1:5427589/1‑150 (MQ=255) cgTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAacac < 2:1745676/150‑1 (MQ=255) gTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACAcc < 2:1085342/150‑1 (MQ=255) gTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACAcc < 1:1545940/150‑1 (MQ=255) tCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACAccc < 1:2075377/150‑1 (MQ=255) cGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTg < 1:570760/150‑1 (MQ=255) gACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGc > 2:222831/1‑150 (MQ=255) aCTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGca < 1:3724968/150‑1 (MQ=255) gccggccAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGcaccac > 1:6092023/1‑150 (MQ=255) ccggccAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACg > 1:3855772/1‑150 (MQ=255) ccggccAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGAAATCACTGAGTCAATCGATGTACTCGAAGATCTTGACGATCTTCTGCACTCGCGAAACACCCTGCACCACg > 2:5012893/1‑150 (MQ=255) aaGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTg > 1:7012528/1‑150 (MQ=255) ccTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGcc < 2:5325993/150‑1 (MQ=255) cTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCg < 2:6504604/150‑1 (MQ=255) tGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGa > 1:6569197/1‑150 (MQ=255) tGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGa > 1:1188175/1‑150 (MQ=255) tGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGa > 1:4058581/1‑150 (MQ=255) aaGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGcttctt > 1:5892185/1‑150 (MQ=255) aaGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGcttctt < 2:3014156/150‑1 (MQ=255) gccaaacaaaaaaGGCGATCCATCCGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTg > 1:5391518/8‑150 (MQ=39) tAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCGGTGGCCGAGTTGGCTTCTTGAc < 1:2029526/150‑1 (MQ=255) aCAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCTCTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACgg < 1:2575084/150‑1 (MQ=255) cAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACggg < 2:2501199/150‑1 (MQ=255) acaaaaaaGGCGATCCATCCGGATCGCCTTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACgg > 2:6960289/3‑150 (MQ=39) caaaaaaGGCGATCCATCCGGATCGCCTTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACggg > 1:4211950/2‑150 (MQ=39) aaaaaaGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTg > 1:4734563/1‑150 (MQ=255) aaaGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACCGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGAcc > 2:3475639/1‑150 (MQ=255) aaGGCGCTCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCa < 2:3932719/150‑1 (MQ=255) aaGGCGATCCATCCGGATCGCCATTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGAcc > 1:2323622/1‑150 (MQ=255) aGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAg < 1:2206519/150‑1 (MQ=255) aGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAg < 2:5953441/150‑1 (MQ=255) gATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGccc > 2:907408/1‑150 (MQ=255) tCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGc > 2:3162609/1‑103 (MQ=255) tCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGCCcag < 1:4432574/150‑1 (MQ=255) ccGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGCCcagc > 2:5054039/1‑150 (MQ=255) ggatggatCGCG‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGCCcagcag > 2:3038890/1‑150 (MQ=255) ggatggatCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGCCcagcag > 1:2870108/1‑150 (MQ=255) ggatggatCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGCCcagcag < 1:7325846/150‑1 (MQ=255) ggatggatCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGCCcagcag < 1:5954313/150‑1 (MQ=255) gatggatCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGCCCAGCAgg > 1:5202906/1‑150 (MQ=255) tggatCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGCCCAGCAGGTa < 2:704958/150‑1 (MQ=255) | GGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGCCCAGCAGGTA > NC_002947/1512890‑1513188 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |