| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,556,273 | G→T | 9.2% | intergenic (+41/+85) | groL → / ← pykA | chaperonin GroEL/pyruvate kinase II |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,556,273 | 0 | G | T | 9.2% | 783.4 / 49.5 | 238 | intergenic (+41/+85) | groL/pykA | chaperonin GroEL/pyruvate kinase II |
| Reads supporting (aligned to +/- strand): ref base G (112/104); new base T (8/14); total (120/118) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.86e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 246 total aligned reads displayed.
GGTCTGATGATCACCACCGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGT > NC_002947/1556125‑1556422 | ggTCTGATGATCACCACCGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTcgc < 1:3527410/150‑1 (MQ=255) cTGATGATCACCACCGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCgag > 1:5520866/1‑150 (MQ=255) gatgatCACCACCGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCgagac > 2:4152225/1‑149 (MQ=255) gatCACCACCGAAGCCATGGTTGCCGACCTGCCGGAATACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCTCGCGAACCg < 1:272928/150‑1 (MQ=255) gatCACCACCGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCg < 1:1097821/150‑1 (MQ=255) atCACCACCGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCTCGCGAACCgg < 2:5638770/150‑1 (MQ=255) atCACCACCGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCgg < 2:471183/150‑1 (MQ=255) tCACCACCGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCggg > 2:3289241/1‑150 (MQ=255) tCACCACCGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCggg > 2:1878236/1‑150 (MQ=255) tCACCACCGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCggg < 1:3910093/150‑1 (MQ=255) caccacCGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCTCGCGAACCgggg < 1:6659125/150‑1 (MQ=255) caccacCGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCTCGCGAACCgggg < 1:5328457/150‑1 (MQ=255) caccacCGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCgggg < 2:5321008/150‑1 (MQ=255) caccacCGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCgggg > 2:6827419/1‑150 (MQ=255) accaccGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCTCGCGAACCGGGGc < 1:5005072/150‑1 (MQ=255) ccaccGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTcgc > 1:3246296/1‑137 (MQ=255) caccGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCTGGTTCGCGAGAACCGGGGCtt > 1:7366446/1‑150 (MQ=255) caccGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCtt > 2:5680894/1‑150 (MQ=255) accGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCCGACAGCAATAAAAAAGCCCCGGTTCTCGCGAACCGGGGCt < 1:5394435/150‑1 (MQ=37) aaGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCTCGCGAACCGGGGCtttttga < 2:2368198/150‑3 (MQ=255) aaGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCTCGCGAACCGGGGCtttttga < 2:2989704/150‑3 (MQ=255) aaGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTa > 1:2915738/1‑150 (MQ=255) gCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTAtt < 2:1616153/150‑1 (MQ=255) ggTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGt > 2:5096090/1‑150 (MQ=255) ttGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAATGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCg > 2:4655750/1‑150 (MQ=255) tGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCgg < 2:4730964/150‑1 (MQ=255) gCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCTAGAACCGGGGCTTTTTTATTGCTGTCggg < 1:2654986/150‑1 (MQ=255) ccGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCgggg > 1:6920607/1‑150 (MQ=255) cGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGc > 1:2687705/1‑150 (MQ=255) cTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCctct > 2:3025504/1‑150 (MQ=255) ggAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCgca > 2:6293694/1‑150 (MQ=255) ggAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCgca < 2:3904304/150‑1 (MQ=255) gAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCgcag < 2:5956266/150‑1 (MQ=255) aaGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTATTTTATTGCTGTCGGGGCCTCTTCgcagc < 1:1602783/150‑1 (MQ=255) aCAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGcaca > 1:6910653/1‑150 (MQ=255) aaGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAg > 1:4175038/1‑150 (MQ=255) aGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAgg < 2:5402277/150‑1 (MQ=255) ccAGCTGCGGGCAGGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCCTGCGGTAAGCCAGCCGTACCCCCCTG‑CA‑CCATCAACAAGCCCCGGTTCGCGTGAACCGGGGCTATTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCt < 2:5691423/150‑1 (MQ=255) cAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTg < 1:6502984/150‑1 (MQ=255) ctgctgGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTgcgc > 2:4330861/1‑150 (MQ=255) ctgGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTg > 1:6170952/1‑150 (MQ=255) tgGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGa < 2:6586842/150‑1 (MQ=255) tGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCtt < 2:1459285/150‑1 (MQ=255) cTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCtt > 2:3119350/1‑147 (MQ=255) cTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCtt < 1:3119350/147‑1 (MQ=255) cTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTtgtg > 1:6725444/1‑150 (MQ=255) gATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTATTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCt < 1:2074839/150‑1 (MQ=255) gtggcatgggtggcatggGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGGTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAAc < 1:3665607/150‑1 (MQ=255) gcatgggtggcatgggCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAATGCACCGGTTCGCGTGAACCGGGGCTTTTTCATTGCTGACGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAATCGAg > 1:75233/1‑150 (MQ=255) catgggtggcatgggCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGt < 1:5717398/150‑1 (MQ=255) atgggtggcatgggCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTg < 1:5117006/150‑1 (MQ=255) atgggtggcatgggCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTg > 2:442939/1‑150 (MQ=255) atgggtggcatgggCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTg > 1:439546/1‑150 (MQ=255) gggtggcatgggCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGa < 1:1517532/150‑1 (MQ=255) gtggcatgggCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGACCCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATc > 2:2872383/1‑150 (MQ=255) ggcatgggCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCaa > 2:2008891/1‑150 (MQ=255) gcatgggCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAAc < 1:1394794/150‑1 (MQ=255) gcatgggCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAAc < 1:4832839/150‑1 (MQ=255) catgggCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTtgtg < 1:2465521/128‑1 (MQ=255) catgggCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAAcc > 1:7060759/1‑150 (MQ=255) atgggCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCg > 2:718723/1‑150 (MQ=255) gggCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGAc < 2:439546/150‑1 (MQ=255) ggcggcATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGAcc < 1:6293461/150‑1 (MQ=255) gcggcATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAATTAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGGCTTGTGCTGTGAAACGAGTGGATCTACCGACCa > 1:1798972/1‑150 (MQ=255) gcggcATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCa < 2:1781770/150‑1 (MQ=255) gataatgTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCgg > 2:6243444/5‑150 (MQ=255) cATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCgg > 1:4041263/1‑150 (MQ=255) cATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCgg > 1:4313077/1‑150 (MQ=255) tgatgTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGAt > 1:4678675/1‑150 (MQ=255) gatgTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATc > 1:1251653/1‑150 (MQ=255) atgTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCa > 1:842822/1‑150 (MQ=255) atgTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGAGGATCAACCGACCAGCGGATCa > 2:1130972/1‑150 (MQ=255) atgTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGGTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCa > 2:4870548/1‑150 (MQ=255) tgTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCAc > 1:2613025/1‑150 (MQ=255) gTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCAcc > 2:1900279/1‑150 (MQ=255) gTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGCCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCAcc > 2:5170022/1‑150 (MQ=255) agccagccTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGAc < 2:855943/150‑1 (MQ=255) gccagccTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGt < 2:5727616/122‑1 (MQ=255) ccagccTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGt < 2:4108203/150‑1 (MQ=255) agccTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGGTTGAGCCTTGTGGTGTGAAAAGAGTGGATCAACCGACAAGCGGATCACCGACGTGc > 1:4521971/1‑150 (MQ=255) agccTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGCTCAACCGACCAGCGGATCACCGACGTGc > 1:5743636/1‑150 (MQ=255) agccTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGc < 1:2596803/150‑1 (MQ=255) agccTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGc > 1:3303541/1‑150 (MQ=255) agccTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAACGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGCGGATCAACCGACCAGCGGATCACCGACGTGc < 2:1568755/150‑1 (MQ=255) ccTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAg > 2:2511834/1‑150 (MQ=255) aCCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGACCCGGGGCTTTTTGATTGCTGTCGGGGCCTCCTCGCAGCACAAGGCGGCGCGTGAGCCGTGGGCTGTGAACCGAGTGGAGCACCCGACCAGCGGAGCCCCGCCGGGCCGGagc > 2:5876962/1‑148 (MQ=255) ccccccTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCt > 1:7204967/1‑150 (MQ=255) ccccTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTc < 2:3623710/150‑1 (MQ=255) cccTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCa > 1:2577849/1‑150 (MQ=255) cTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATg < 1:2253287/150‑1 (MQ=255) aatgCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGGTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCa > 2:4571076/4‑150 (MQ=255) aaGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCAc < 1:1878236/150‑1 (MQ=255) aGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCAcc > 2:782349/1‑150 (MQ=255) cccGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGAt > 1:5181610/1‑150 (MQ=255) cccGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGAt > 2:1905825/1‑150 (MQ=255) ccGGTTCGCGAGACCCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGCTCACCGACGTGCAGGATCTTCATGCCCTTGGTGCCACCGATg > 1:4096654/1‑150 (MQ=255) ccGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATg < 1:6788653/150‑1 (MQ=255) ggTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGgt < 2:7155265/150‑1 (MQ=255) tCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGtgtg < 1:1733010/150‑1 (MQ=255) gcgAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGt > 2:2670639/1‑150 (MQ=255) | GGTCTGATGATCACCACCGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTG‑CA‑CCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGT > NC_002947/1556125‑1556422 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |