Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,597,595 G→C 10.2% D67H (GAC→CAC) ‡ PP_1397 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,597,5950GC10.2% 348.4 / 5.4 130D67H (GAC→CAC) ‡PP_1397hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (101/13);  new base C (13/2);  total (114/16)
Fisher's exact test for biased strand distribution p-value = 6.86e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 170 total aligned reads displayed.

CACTCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCAGGATCGGCTC  >  NC_002947/1597447‑1597744
                                                                                                                                                      |                                                                                                                                                     
cACTCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCcga                                                                                                                                                      <  1:5906781/150‑1 (MQ=255)
 aCTCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCTGCcgac                                                                                                                                                     >  2:6032937/1‑150 (MQ=255)
 aCTCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCcgac                                                                                                                                                     <  1:4914848/150‑1 (MQ=255)
 aCTCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCcgac                                                                                                                                                     >  1:321737/1‑150 (MQ=255)
 aCTCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCcgac                                                                                                                                                     >  1:6759686/1‑150 (MQ=255)
 aCTCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCcgac                                                                                                                                                     >  1:2017794/1‑150 (MQ=255)
 aCTCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCcgac                                                                                                                                                     <  1:4711203/150‑1 (MQ=255)
   tCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCcgccga                                                                                                                                                   >  1:4021930/1‑150 (MQ=255)
   tCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCcgacga                                                                                                                                                   >  2:6618531/1‑150 (MQ=255)
   tCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCcgacga                                                                                                                                                   >  1:2840837/1‑150 (MQ=255)
   tCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCcgacga                                                                                                                                                   >  2:101419/1‑150 (MQ=255)
   tCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCcgacga                                                                                                                                                   >  2:1372182/1‑150 (MQ=255)
   tCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCCCcgacca                                                                                                                                                   >  1:6302171/1‑148 (MQ=255)
    cagctCGAAGCGGTATCGGCGATGGTGCCGGTGGACGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTGGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAg                                                                                                                                                  <  1:4643302/146‑1 (MQ=255)
     aTTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAgg                                                                                                                                                 <  1:2346830/150‑1 (MQ=255)
     aTTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAgg                                                                                                                                                 >  1:4760326/1‑150 (MQ=255)
      tttCGAAGCGGTATCGGCGATGGTGCCGGTGGACGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACACGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAggc                                                                                                                                                <  1:1386628/150‑1 (MQ=255)
      tttCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAggc                                                                                                                                                >  1:3239042/1‑150 (MQ=255)
      tttCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCCACCAggc                                                                                                                                                >  1:3239109/1‑150 (MQ=255)
       ttCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAggcg                                                                                                                                               >  2:2670059/1‑150 (MQ=255)
         cGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAggcggc                                                                                                                                             <  2:2750249/150‑1 (MQ=255)
         cGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAggcggc                                                                                                                                             <  2:6424542/150‑1 (MQ=255)
          gAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGCCGGGGCGGcc                                                                                                                                            >  1:4569961/1‑150 (MQ=255)
          gAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGCCGAGGCGGcc                                                                                                                                            >  1:2495234/1‑150 (MQ=255)
          gAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGcc                                                                                                                                            >  2:5311101/1‑150 (MQ=255)
                gTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCAccgcc                                                                                                                                      >  2:5520412/1‑150 (MQ=255)
                gTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCAccgcc                                                                                                                                      >  2:3046031/1‑150 (MQ=255)
                 tATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCAccgccg                                                                                                                                     >  2:2322660/1‑150 (MQ=255)
                 tATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCAccgccg                                                                                                                                     >  1:2093905/1‑150 (MQ=255)
                   tCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCCACCAGGCCGCCCCCGCCGAg                                                                                                                                   >  1:3865071/1‑150 (MQ=255)
                     ggCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCCCCGCCGAGCt                                                                                                                                 >  2:1857130/1‑150 (MQ=255)
                                cGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCt                                                                                                                        >  2:5068085/1‑150 (MQ=255)
                                 ggTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGcc                                                                                                                     >  1:4282309/1‑149 (MQ=255)
                                 ggTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCCCCCACGCGGCGGCCCCCCCCCAGCTGCAACGCCAGcc                                                                                                                     >  1:2279595/1‑149 (MQ=255)
                                  gTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAg                                                                                                                    >  2:5771609/1‑150 (MQ=255)
                                  gTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCCCCGACCTGCAACCCCTGCAg                                                                                                                    >  2:441871/1‑150 (MQ=255)
                                  gTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCCACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAg                                                                                                                    >  1:1114120/1‑150 (MQ=255)
                                    ggAAGGTGGCGGCTATCACGCGGCCATGGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAggg                                                                                                                  >  2:6043682/1‑150 (MQ=255)
                                    ggAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCCAGCTGCAACGCCAGCAggg                                                                                                                  >  1:6905737/1‑150 (MQ=255)
                                     gAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGc                                                                                                                 >  2:822975/1‑150 (MQ=255)
                                         gTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTcc                                                                                                             >  1:3873164/1‑149 (MQ=255)
                                            gcggcTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCg                                                                                                          >  1:5211828/1‑150 (MQ=255)
                                             cggcTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCAGCAGGGCGTCAGCGa                                                                                                         >  2:2599953/1‑150 (MQ=255)
                                                 tATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAagag                                                                                                     >  1:1771583/1‑150 (MQ=255)
                                                   tCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGCGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAggg                                                                                                   >  2:3343060/1‑150 (MQ=255)
                                                   tCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAggg                                                                                                   >  2:1280986/1‑150 (MQ=255)
                                                     aCGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTg                                                                                                 >  2:6110621/1‑150 (MQ=255)
                                                     aCGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCCCCCACCAGCCACGCCAGCCGGGCGGCCGCGCAGAGGGTg                                                                                                 >  1:5644325/1‑150 (MQ=255)
                                                       gcgGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAg                                                                                               >  2:1223726/1‑150 (MQ=255)
                                                       gcgGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCCAGCTGCAACCCCGGCAGGGCGTCAGCGAAGAGGGTggg                                                                                               >  1:432244/1‑148 (MQ=255)
                                                              tCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGCCGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGctggtct                                                                                        >  1:5146200/1‑150 (MQ=255)
                                                                gcgGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCCACGAGGCGGCCACCGCCGAGCTTCAACCCCTGCACGGCGTCAGCGAAGAGGGTGAGctggtctgg                                                                                      >  1:6319395/1‑150 (MQ=255)
                                                                      aaaGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCa                                                                                >  2:5469292/1‑150 (MQ=255)
                                                                       aaGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGACCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGCGCTGGTCTGGTGATCAg                                                                               >  2:6954459/1‑150 (MQ=255)
                                                                               ggCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCcggcgg                                                                       >  2:408934/1‑150 (MQ=255)
                                                                                 cATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCCCCGAGGCGGCCACCCCCCAGCTGCAACCCCAGCAGGGCGTCAGCGAACAGGGTGAGCTGGTGTGGTGATAAGGCCCGCGGcc                                                                     >  1:7003425/1‑150 (MQ=255)
                                                                                          cgcgccgcgcTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGGCGCCCCCGAGGCGGCCACCGCCGCGCAGCAACCCCGGCCGGGCGGCAGCGCAGAGGGGGAGCGGGTGGGGGGGTCAGGCCGGCGGCCGGGccccct                                                            >  1:6212760/1‑146 (MQ=255)
                                                                                           gcgccgcgcTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACCAGGCGGCCCCCCCCGAGCTGCAACCCCAGCCGGGCGTCACCGAAGAGGGTGGGCTGGTGTGGGGTTCAGGCCGGCGGCCGGGcccacat                                                           >  1:287767/1‑145 (MQ=255)
                                                                                                    tttCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGCCGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGtt                                                  >  2:6882237/1‑150 (MQ=255)
                                                                                                      tCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAg                                                                                                                                                  >  2:371030/1‑52 (MQ=255)
                                                                                                      tCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAg                                                                                                                                                  <  1:371030/52‑1 (MQ=255)
                                                                                                      tCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCAGCAGGGCGTCAGCGCAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCAACTTGAACAGGTTGc                                                >  1:3543291/1‑150 (MQ=255)
                                                                                                       cacaAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGcc                                               >  2:6722263/1‑150 (MQ=255)
                                                                                                       cacaAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCCGGCGGCAACCCCAGCCGGGCGTCAGCGAAGAGGGTGTGCTGGTGTGGTGATCAGGCCGGCGGCCGGGCCATCTTGTAAAGGTTTcc                                               >  1:1102603/1‑150 (MQ=255)
                                                                                                        acaAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGCGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCCGCGAAGCGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCAGCTTGAACAGGTTGccc                                              >  2:2233248/1‑150 (MQ=255)
                                                                                                        acaAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGccc                                              >  2:6797105/1‑150 (MQ=255)
                                                                                                         caAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAAAAGGTTGCCCa                                             >  2:1792002/1‑150 (MQ=255)
                                                                                                         caAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCCTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCa                                             >  2:948802/1‑150 (MQ=255)
                                                                                                          aaGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAg                                            >  2:6049598/1‑150 (MQ=255)
                                                                                                          aaGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAg                                            >  2:3657695/1‑150 (MQ=255)
                                                                                                              t‑‑tCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCCCCCCCCAGGCGGCCCCCCCCGCGCGGCAACCCCAGCAGGGCGGCAGCGAAGAGGGGGAGCGGGGCGGGTGGTCAGGCCGGCGGCCCGGCCCGCGTGAACAGGTTTccccccgcg                                        >  1:2801857/1‑144 (MQ=255)
                                                                                                                 tctcGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGa                                       >  2:4831198/1‑150 (MQ=255)
                                                                                                                     gACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGGGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCCTCTTGAACAGGTTGCCCAGCTCGAaata                                   >  2:5407004/1‑150 (MQ=255)
                                                                                                                     gACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATAAGGCCGGCGGCCGGGCCATCTTTAACAGGTTGCCCATGTAGAaata                                   >  2:1126506/1‑150 (MQ=255)
                                                                                                                     gACGGGCAGGTGTTCAAGGGCGCCGTGGCCCCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGTGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAaata                                   >  2:1553684/1‑150 (MQ=255)
                                                                                                                      aCGGGCAGGTGTTCAAGGGCGCTGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAaataa                                  >  1:1803046/1‑150 (MQ=255)
                                                                                                                      aCGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCCAGCTGCAACGCCTGCAGGGCGTCAGCGGAGAGGGTGAGCGGGGCGGGTGATCAGGCCCGCGGCCGGGCCCACTTGAACAGGTTTCCCAGCGCGAaataa                                  >  1:5369705/1‑150 (MQ=255)
                                                                                                                          gCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCCGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGGCCAGCTCGAAATAATccg                              >  2:5035089/1‑150 (MQ=255)
                                                                                                                          gCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAaataatacc                              >  2:5668817/1‑147 (MQ=255)
                                                                                                                          gCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATccg                              >  2:1045445/1‑150 (MQ=255)
                                                                                                                          gCAGGTGTTCAAGGGCGCCGTGGCCGCCCCCGGGGCGGCCCCCCCCGAGCTGCAACGCCGGCAGGGCGTCAGCGCAGAGGGTGAGCGGGTCTGGTGATAAGGCCGGCGGCCGGGCCCTCTTGAACAGGTTGCCCAGCGCGAAATAATacg                              >  1:2886087/1‑150 (MQ=255)
                                                                                                                          gCAGGTGTTCAAGGGCGCCGTGGCCCCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATccg                              >  1:6157003/1‑150 (MQ=255)
                                                                                                                            aGGTGTTCAAGGGCGCCGTGGCCGCCCACGAGGCGGCCCCCCCCCAGCTGCAAAGCCTGCAGGGCGTCCGCGAAGAGGGTGAGCTGGTGTGGTGATCAGGCCCGCGGCCGGGCCCACGTTGACAGGTTGGCCAGCGCGAaaaaatacccc                            >  1:6487360/1‑145 (MQ=255)
                                                                                                                             gtttttCATGGGCGCGGGGGCCGCCGCGGGGGCGCCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATccgccg                           <  2:2923678/146‑1 (MQ=255)
                                                                                                                              gtgtTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCgg                          >  2:7410959/1‑150 (MQ=255)
                                                                                                                              gtgtTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAAAGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCAACTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCgg                          >  1:4236544/1‑150 (MQ=255)
                                                                                                                              gtgtTCAAGGGCGCCGTGGCCCCCGACGAGGCGGCCACCCCCCAGCTGCAACGCCAGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCCGCGGCCGGGCCAACATGAGCAGGTTTCCCAGCACGAaataatacccccg                          >  1:534958/1‑143 (MQ=255)
                                                                                                                                tttccggggCGGGGTGGCCGCCCCCGCGGGGCCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGc                        <  1:588079/144‑1 (MQ=255)
                                                                                                                                    aaGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCAcc                    >  2:2881958/1‑150 (MQ=255)
                                                                                                                                            cGTGGCCGCCTAGGTGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCa            <  2:6121430/150‑1 (MQ=255)
                                                                                                                                               ggCCGCCGCCGTGGCGCCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCAGGa         <  2:2840668/150‑1 (MQ=255)
                                                                                                                                                 ccgccgCGGCGGCGCCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAGCAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCAGGAtc       <  2:534958/150‑1 (MQ=255)
                                                                                                                                                  cgccgACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCAGGAtcg      >  1:7414656/1‑150 (MQ=255)
                                                                                                                                                  cgccgACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCAGGAtcg      >  1:2041166/1‑150 (MQ=255)
                                                                                                                                                  cgccgACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCAGGAtcg      >  1:735531/1‑150 (MQ=255)
                                                                                                                                                  cgccgACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCAGGAtcg      >  2:2111163/1‑150 (MQ=255)
                                                                                                                                                   gccgAGGTGGGGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCAGGAtcgg     <  2:1105738/150‑1 (MQ=255)
                                                                                                                                                   gccgACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCAGGAtcgg     <  2:6361719/150‑1 (MQ=255)
                                                                                                                                                     cgacgaGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCAGGAtcggct   >  2:2043199/1‑150 (MQ=255)
                                                                                                                                                      gacgaGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCAGGAtcggctc  >  2:3320801/1‑150 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
CACTCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGT‑‑TCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCAGGATCGGCTC  >  NC_002947/1597447‑1597744

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑