Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,717,071 A→T 11.4% intergenic (+71/‑187) ppc → / → adk phosphoenolpyruvate carboxylase/adenylate kinase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,717,0710AT11.4% 507.2 / 35.5 218intergenic (+71/‑187)ppc/adkphosphoenolpyruvate carboxylase/adenylate kinase
Reads supporting (aligned to +/- strand):  ref base A (116/52);  new base T (5/20);  total (123/95)
Fisher's exact test for biased strand distribution p-value = 6.96e-06
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 221 total aligned reads displayed.

CGCTCTGGACAGCCCGTTGGAGCAGGCCTTGCTGGTGACCGTGGCGGGTATTGCCGCCGGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGAGCAGCCTTCTGACCGATTTATGGTCATACCCGATTTTCCGGACTTGGCCCTGGTCGCCGAA  >  NC_002947/1716922‑1717220
                                                                                                                                                      |                                                                                                                                                      
cGCTCTGGACAGCCCGTTGGAGCAGGCCTTGCTGGTGACCGTGGCGGGTATTGCCGCCGGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCa                                                                                                                                                        <  1:5962412/150‑1 (MQ=255)
 gCTCTGGACAGCCCGTTGGAGCAGGCCTTGCTGGTGACCGTGGCGGGTATTGCCGCCGGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAg                                                                                                                                                       <  1:6131291/150‑1 (MQ=255)
 gCTCTGGACAGCCCGTTGGAGCAGGCCTTGCTGGTGACCGTGGCGGGTATTGCCGCCGGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAg                                                                                                                                                       <  2:3226260/150‑1 (MQ=255)
  ctctGGACAGCCCGTTGGAGCAGGCCTTGCTGGTGACCGTGGCGGGTATTGCCGCCGGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAgg                                                                                                                                                      <  2:5006672/150‑1 (MQ=255)
  ctctGGACAGCCCGTTGGAGCAGGCCTTGCTGGTGACCGTGGCGGGTATTGCCGCCGGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAgg                                                                                                                                                      <  2:4682142/150‑1 (MQ=255)
   tctGGACAGCCCGTTGGAGCAGGCCTTGCTGGTGACCGTGGCGGGTATTGCCGCCGGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGgc                                                                                                                                                     <  2:363555/150‑1 (MQ=255)
   tctGGACAGCCCGTTGGAGCAGGCCTTGCTGGTGACCGTGGCGGGTATTGCCGCCGGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGgc                                                                                                                                                     <  1:4394595/150‑1 (MQ=255)
   tctGGACAGCCCGTTGGAGCAGGCCTTGCTGGTGACCGTGGCGGGTATTGCCGCCGGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGgc                                                                                                                                                     <  1:69528/150‑1 (MQ=255)
      ggACAGCCCGTTGGAGCAGGCCTTGCTGGTGACCGTGGCGGGTATTGCCGCCGGGCTGCGCAACACCGGCTAAGGACAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCa                                                                                                                                                  >  2:4262114/1‑150 (MQ=255)
       gACAGCCCGTTGGAGCAGGCCTTGCTGGTGACCGTGGCGGGTATTGCCGCCGGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCaa                                                                                                                                                 >  1:6628938/1‑150 (MQ=255)
       gACAGCCCGTTGGAGCAGGCCTTGCTGGTGACCGTGGCGGGTATTGCCGCCGGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCaa                                                                                                                                                 >  2:7235213/1‑150 (MQ=255)
         cAGCCCGTTGGAGCAGGCCTTGCTGGTGACCGTGGCGGGTATTGCCGCCGGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCTGGCGCAAcc                                                                                                                                               <  2:1176209/150‑1 (MQ=255)
         cAGCCCGTTGGAGCAGGCCTTGCTGGTGACCGTGGCGGGTATTGCCGCCGGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAAcc                                                                                                                                               <  1:3478926/150‑1 (MQ=255)
          aGCCCGTTGGAGCAGGCCTTGCTGGTGACCGTGGCGGGTATTGCCGCCGGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCTGGCGCAACCg                                                                                                                                              <  1:3811608/150‑1 (MQ=255)
          aGCCCGTTGGAGCAGGCCTTGCTGGTGACCGTGGCGGGTATTGCCGCCGGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCg                                                                                                                                              <  1:1902797/150‑1 (MQ=255)
             ccGTTGGAGCAGGCCTTGCTGGTGACCGTGGCGGGTATTGCCGCCGGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCt                                                                                                                                           <  2:3523561/150‑1 (MQ=255)
               gTTGGAGCAGGCCTTGCTGGTGACCGTGGCGGGTATTGCCGCCGGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCCGTTGCGCCACGCGCAACCCCCTGc                                                                                                                                         >  1:2781158/1‑150 (MQ=255)
                  ggcgccggCCTTGGTGGTGACCGGGGCGGGTATGGCCGCCGGGCTGCGCACCACCGGCTATGGGCACGCCCGGGTCATGTCGGGTGAGGGCCATCCCGGCCCGGCACACGGAGGGGGAGGGGGGTTGCGCCAGGCGCAACCGCCTGCCCg                                                                                                                                      <  2:6037401/144‑1 (MQ=255)
                   gAGCAGGCCTTGCTGGTGACCGTGGCGGGTATTGCCGCCGGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCAGCCCgg                                                                                                                                     >  1:3980479/1‑150 (MQ=255)
                    aGCAGGCCTTGCTGGTGACCGTGGCGGGTATTGCCGCCGGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGt                                                                                                                                    >  1:7403432/1‑150 (MQ=255)
                     gCAGGCCTTGCTGGTGACCGTGGTGGGTATTGCCGCCGGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTc                                                                                                                                   >  2:5180022/1‑150 (MQ=255)
                     gCAGGCCTTGCTGGTGACCGTGGCGGGTATTGCCGCCGGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTc                                                                                                                                   >  1:430443/1‑150 (MQ=255)
                     gCAGGCCTTGCTGGTGACCGTGGCGGGTATTGCCGCCGGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAAACCCCTGCCCGGTc                                                                                                                                   >  1:6323635/1‑150 (MQ=255)
                         gCCTTGCTGGTGACCGTGGCGGGTATTGCCGCCGGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGcc                                                                                                                               >  2:1443664/1‑150 (MQ=255)
                            ttGCTGGTGACCGTGGCGGGTATTGCCGCCGGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCa                                                                                                                            >  2:2674491/1‑150 (MQ=255)
                                tGGTGACCGTGGCGGGTATTGCCGCCGGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTg                                                                                                                        >  1:3691211/1‑150 (MQ=255)
                                tGGTGACCGTGGCGGGTATTGCCGCCGGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTg                                                                                                                        >  2:3412861/1‑150 (MQ=255)
                                   tGACCGTGGCGGGTATTGCCGCCGGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCCGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGgcg                                                                                                                     >  1:3200421/1‑150 (MQ=255)
                                       gggggggggTTTGGCCGCCGGGGTGCGCAACCCCGGCTCCGGGCACGCCCGGGTCATGTGGGGTGCGGGCCATCCCGGCCCGGCACACGGCGGGGGCGGGGGGTTGCGCCCGGCGCACCCGCCTGCCCGGTCAGCCGCAAGTGGCGCAtt                                                                                                                <  2:6177179/144‑1 (MQ=255)
                                       cGTGGCGGGTATTGCCGCCGGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCAtt                                                                                                                >  2:2255597/1‑150 (MQ=255)
                                        gTGGCGGGTATTGCCGCCGGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCAGCCCGGTCAGCCGCAAGTGGCGCAtta                                                                                                               >  1:3307892/1‑149 (MQ=255)
                                               gTATTGCCGCCGGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCACGTGGCGCAATCCTGCCAc                                                                                                        >  1:1490815/1‑150 (MQ=255)
                                               gTATTGCCGCCGGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAAc                                                                                                        >  2:644725/1‑150 (MQ=255)
                                                   tGCCGCCGGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTg                                                                                                    >  1:4440051/1‑150 (MQ=255)
                                                   tGCCGCCGGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCCCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCaaagttg                                                                                                    >  1:5415768/1‑145 (MQ=255)
                                                   tGCCGCCGGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGCTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTg                                                                                                    <  1:4250596/150‑1 (MQ=255)
                                                   ggccgccGGGCTGCGCAACCCGGGCTACGGGCACGCCGGGGTCTTGTCGGGTGCGGGCCATACCGGCCGGCCACACGGCGGGGGTGGGGGTTTGCGCCCGGCGCACCCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTg                                                                                                    <  2:2892516/149‑1 (MQ=255)
                                                    gccgcgGGGCTGCCCACCACCGGCTACGGGCACGCCGGGGTCATGTCTGGTGACGGCAATACCGGCCCGGCACATGGCGGGGGCGGGGGGTTGCGCCTGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTgg                                                                                                   <  2:6547235/150‑1 (MQ=255)
                                                    gccgccGGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTgg                                                                                                   >  2:5990785/1‑150 (MQ=255)
                                                       gccgGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGAc                                                                                                >  2:3767808/1‑150 (MQ=255)
                                                       gccgGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGAc                                                                                                >  1:2958205/1‑150 (MQ=255)
                                                       gccgGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCCCCAACTTTGGGAc                                                                                                >  1:5281263/1‑150 (MQ=255)
                                                         cgGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGc                                                                                              >  1:1794898/1‑150 (MQ=255)
                                                            gCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTg                                                                                           >  2:4386519/1‑150 (MQ=255)
                                                              tGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTc                                                                                         >  1:6446610/1‑150 (MQ=255)
                                                              tGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGGTGCGCCAGGCGCAACCGCCAGCCCCGTCAGCCGCAAGTGGCCCATTCCTGCACCGGTGGGACGCTTGTc                                                                                         >  1:216141/1‑150 (MQ=255)
                                                                  cAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGc                                                                                     >  2:3005440/1‑150 (MQ=255)
                                                                        cGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCgg                                                                               >  2:4480637/1‑150 (MQ=255)
                                                                          gCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGgc                                                                             >  2:5585768/1‑150 (MQ=255)
                                                                          gCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCCCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGgc                                                                             >  1:5188875/1‑150 (MQ=255)
                                                                           cataGGGCAAGCCCGGGTATTTTCTGGTGACGGCCATACCGGCCCGGCAAATGGAGGGGTTGGGCGGTTGCGCCTGGCGCAACGGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGgcg                                                                            <  2:3020941/147‑1 (MQ=255)
                                                                           cTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGgcg                                                                            >  1:2663289/1‑150 (MQ=255)
                                                                               gggCACGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCGGGCACAAGGACGGGGAGGGCGTTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCtgt                                                                        <  2:5315412/150‑1 (MQ=255)
                                                                                    cgCCGGGTTCTTGTCGGGTGACGCCAAACCCGGCCGGCCCCAGGGAGGGGCCGGGGGTTGGCGCCCGGCGCACCCCCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATc                                                                   <  2:1377254/149‑1 (MQ=255)
                                                                                        cGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGa                                                               >  2:3348971/1‑150 (MQ=255)
                                                                                        cGGGTCATGCCTGGGGCCGGCCATACCGGCCCGGCACACGGCCGGGGCGGGCGTTTGCGCCCGGCGCACCCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGa                                                               <  2:1666505/150‑1 (MQ=255)
                                                                                         gggTCATGTCGGGGGACGGCCATCCCGGCCCGGCACACGGCGGGGGCGGGCGGGGGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGag                                                              <  2:5957396/150‑1 (MQ=255)
                                                                                          ggTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGAAGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGagc                                                             >  2:356863/1‑150 (MQ=255)
                                                                                                tccttgTGACGGCCATACAGGCCCGGCACAAGGACGGGGACCGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGAGCAGCCtt                                                       >  2:6929100/6‑150 (MQ=255)
                                                                                                gTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGAGCAGCCtt                                                       >  2:1023462/1‑150 (MQ=255)
                                                                                                   tGGTGCGGGCAATACCGGCCCGCCACACGGCGGGGGTGGGGGGTGGCGCCCGGCGCACCCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGAGCAGCCTTCTg                                                    <  1:2439302/150‑1 (MQ=255)
                                                                                                   tGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCCACCGCCAGCCCCGTCAGCCGCCACTGGCGCATTCCGGCAACTTTGGGACGCTTTTCTTGCTGCCGGGCGCGGTGTATCTTGAGCAGCCATCTg                                                    >  1:1855452/1‑150 (MQ=255)
                                                                                                   tGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGAGCAGCCTTCTg                                                    >  2:2199865/1‑150 (MQ=255)
                                                                                                   tGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGAGCAGCCTTCTg                                                    >  2:4902839/1‑150 (MQ=255)
                                                                                                   tGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGAGCAGCCTTCTg                                                    >  2:4135467/1‑150 (MQ=255)
                                                                                                   tGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCAGCCCGGTCAGCCGCCAGTGGCGCAATCCTGCAACTTTTGGACGCTTGTATGGCTGCCGGGCGCGGTGTATCTTGAGCAGCCTTCTg                                                    >  1:2026719/1‑150 (MQ=255)
                                                                                                    ggTGCCGGCAACACCGGCCGGGAAAATGGGGGGGGGGGGGGGTTGCGCCCGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGAGCAGCCTTCTGa                                                   <  2:2528906/150‑1 (MQ=255)
                                                                                                    ggTGACGGCCATACAGGCCCGGCACAAGGCCGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGAGCAGCCTACTGa                                                   <  2:4271208/150‑1 (MQ=255)
                                                                                                      tGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCAGCCCGGTCAGCCGCAAGTGGCGCATTCCAGCAACGTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGAGCAGCCTTCTGAcc                                                 >  1:1410710/1‑150 (MQ=255)
                                                                                                        agggCAATACTGGCCCGGCAAATGGAGGGGGTGGGGGGTTGCGCCAGGCGCACCCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGAGCAGCCTTCTGACCGa                                               <  2:6490332/148‑1 (MQ=255)
                                                                                                        aCGGCCATACAGGCCCGGCACAAGGAGGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGAGCAGCCTTCTGACCGa                                               <  2:4828256/150‑1 (MQ=255)
                                                                                                          ggCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGAGCAGCCTTCTGACCGAtt                                             >  1:6471402/1‑150 (MQ=255)
                                                                                                                aCAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGAGCAGCCTTCTGACCGATTTATGGt                                       >  1:6796011/1‑150 (MQ=255)
                                                                                                                  ctccccGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGAGCAGCCTTCTGACCGATTTATGGTCa                                     >  2:732152/4‑150 (MQ=255)
                                                                                                                    gCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCCCCTGCCCGGTCAGCCGCAAGTGGCGCAATCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGGGTATCTTGGGCAGCCTTATGACCGATTTATGGTCATa                                   >  1:4627005/1‑150 (MQ=255)
                                                                                                                      ccGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGAGCAGCCTTCTGACCGATTTATGGTCATAcc                                 >  2:5477312/1‑150 (MQ=255)
                                                                                                                       cGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCCCCAGCCCGGGCAGCCGCAAGTGGGGCATTCCTGGCACTTTGGGCCGCGTGGCTGGCTGGCGGGCGCTGGGTATCTTGAGCAGCCGTCGGGCCGCTTTATGGTCATAccc                                >  1:236510/1‑150 (MQ=255)
                                                                                                                         gCACACGGACGGGGCGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCACCTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGAGCAGCCTTCTGACCGATTTATGGTCATACCCGa                              <  2:6715931/150‑1 (MQ=255)
                                                                                                                         gCACAAGGACGGGGAGGGCGGTTTCGCCACGCGCAACCCCCAGCCCCGTCACCCGCAAGTGGCGCAATTACTGCAACTTTTGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATATTGAGCAGCCTTCTGACCGATTTATTGTCATACCCg                               >  1:5617395/1‑150 (MQ=255)
                                                                                                                         gCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTACTGCAACGTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATATTGAGCATCCTTCTGACCCATTTATTGTCATAACCGa                              >  1:6914456/1‑150 (MQ=255)
                                                                                                                          cacaAGGACGGGGAGGGCGGTGGCCCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGAGCAGCCTTCTGACCGATTTATGGTCATACCCGAt                             <  2:6625815/150‑1 (MQ=255)
                                                                                                                             agggcgggggggggggGTGGGGCCCGGCGCACCCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGAGCAGCCTTCTGACCGATTTATGGTCATACCCGAtttt                          <  2:5781530/144‑1 (MQ=255)
                                                                                                                                 ggggggTGGGGGGTTGCGCCTGGCGCACCGGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGAGCAGCCTTCTGACCGATTTATGGTCATACCCGATTTTCCgg                      <  1:4775474/148‑1 (MQ=255)
                                                                                                                                     ggtggggggTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGAGCAGCCTTCTGACCGATTTATGGTCATACCCGATTTTCCGGACtt                  <  2:4931166/147‑1 (MQ=255)
                                                                                                                                      ggggggggGTGCCCCACGCGCCCCCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGAGCAGCCTTCTGACCGATTTATGGTCATACCCGATTTTCCGGACTTg                 <  1:6557787/148‑1 (MQ=255)
                                                                                                                                         ggCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGAGCAGCCTTCTGACCGATTTATGGTCATACCCGATTTTCCGGACTTGGcc              >  2:381678/1‑150 (MQ=255)
                                                                                                                                           cGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGGGTATCTTGAGCAGCCTTCTGACCGAGGTATGGTCATACCCGATTTTACGGACTTGGCCCt            >  2:6773289/1‑150 (MQ=255)
                                                                                                                                            ggTTGCGCCTGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGAGCAGCCTTCTGACCGATTTATGGTCATACCCGATTTTCCGGACTTGGCCCTg           >  1:1202597/1‑150 (MQ=255)
                                                                                                                                            ggTTGCGCCTGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGAGCAGCCTTCTGACCGATTTATGGTCATACCCGATTTTCCGGACTTGGCCCTg           >  1:6871057/1‑150 (MQ=255)
                                                                                                                                             gTTGCGCCTGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGAGCAGCCTTCTGACCGATTTATGGTCATACCCGATTTTCCGGACTTGGCCCTgg          >  1:5016134/1‑150 (MQ=255)
                                                                                                                                               tGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGAGCAGCCTTCTGACCGATTTATGGTCATACCCGATTTTCCGGACTTGGCCCTGGTc        >  1:434489/1‑150 (MQ=255)
                                                                                                                                               tGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGAGCAGCCTTCTGACCGATTTATGGTCATACCCGATTTTCCGGACTTGGCCCTGGTc        >  2:7409053/1‑150 (MQ=255)
                                                                                                                                                ccggcCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGAGCAGCCTTCTGACCGATTTATGGTCATACCCGATTTTCCGGACTTGGCCCTGGTc        >  2:2418064/4‑150 (MQ=255)
                                                                                                                                                   gcCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGAGCAGCCTTCTGACCGATTTATGGTCATACCCGATTTTCCGGACTTGGCCCTGGTCGcc     >  1:1885859/1‑150 (MQ=255)
                                                                                                                                                    ccAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTgtgt                                                                      <  2:3660178/84‑1 (MQ=255)
                                                                                                                                                    ccAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGAGCAGCCTTCTGACCGATTTATGGTCATACCCGATTTTCCGGACTTGGCCCTGGTCGCCg    >  1:5135956/1‑150 (MQ=255)
                                                                                                                                                     cAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGAGCAGCCTTCTGACCGATTTATGGTCATACCCGATTTTCCGGACtt                  >  2:2382001/1‑135 (MQ=255)
                                                                                                                                                     cAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCAGGCGCTGTGTATCTTGAGCAGCCTTCTGACCGATTTATGGTCATACCCGATTTTCCGGACTTGGCCCTGGTCGCCGa   >  1:1022638/1‑150 (MQ=255)
                                                                                                                                                      aGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGAGCAGCCTTCTGACCGATTTATGGTCATACCCGATTTTCCGGACTTGGCCCTGGTCGCCGaa  >  1:3552923/1‑150 (MQ=255)
                                                                                                                                                      aGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGAGCAGCCTTCTGACCGATTTATGGTCATACCCGATTTTCCGGACTTGGCCCTGGTCGCCGaa  >  1:1708206/1‑150 (MQ=255)
                                                                                                                                                      |                                                                                                                                                      
CGCTCTGGACAGCCCGTTGGAGCAGGCCTTGCTGGTGACCGTGGCGGGTATTGCCGCCGGGCTGCGCAACACCGGCTAAGGGCAAGCCCGGGTCATGTCTGGTGACGGCCATACAGGCCCGGCACAAGGACGGGGAGGGCGGTTGCGCCAGGCGCAACCGCCTGCCCGGTCAGCCGCAAGTGGCGCATTCCTGCAACTTTGGGACGCTTGTCTGGCTGCCGGGCGCTGTGTATCTTGAGCAGCCTTCTGACCGATTTATGGTCATACCCGATTTTCCGGACTTGGCCCTGGTCGCCGAA  >  NC_002947/1716922‑1717220

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: