| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,972,171 | T→A | 8.1% | intergenic (+49/+70) | PP_1762 → / ← yciK | hypothetical protein/putative oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,972,171 | 0 | T | A | 8.1% | 575.9 / 29.2 | 181 | intergenic (+49/+70) | PP_1762/yciK | hypothetical protein/putative oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base T (77/89); new base A (6/9); total (83/98) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.88e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 184 total aligned reads displayed.
CTGCAAGAGTTACGACTGCATGTTCCTGTTCCTGGAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTT > NC_002947/1972023‑1972320 | cgCAAGAGTTACGACTGCATGTTCCTGTTCCTGGAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCa < 2:3948053/149‑1 (MQ=255) aacccgcagaacaacccgctgcccgaagagatcatgccggtgtacctgtacctgatggggccggacagcacaggggtgaacgggcaggcgttcaacgcccaataaacctgcatCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCa > 2:4652479‑M1/114‑150 (MQ=255) gcagaacaacccgctgcccgaagagatcatgccggtgtacctgtacctgatggggccggacagcacaggggtgaacgggcaggcgttcaacgcccaataaacctgcacCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCa < 1:7309960‑M1/42‑1 (MQ=255) cagaacaacccgctgcccgaagagatcatgccggtgtacctgtacctgatggggccggacagcacaggggtgaacgggcaggcgttcaacgcccaataaacctgtacCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCaa > 2:3999599‑M1/108‑150 (MQ=255) aCTGCATGTTCCTGTTCCTGGAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCaa < 1:4919673/150‑1 (MQ=255) aCTGCATGTTCCTGTTCCTGGAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCaa < 2:4910958/150‑1 (MQ=255) aCTGCATGTTCCTGTTCCTGGAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCaa < 1:6450663/150‑1 (MQ=255) aCTGCATGTTCCTGTTCCTGGAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCaa < 1:567129/150‑1 (MQ=255) cTGCATGTTCCTGTTCCTGGAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAg < 1:3099535/150‑1 (MQ=255) cTGCATGTTCCTGTTCCTGGAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAg < 2:662475/150‑1 (MQ=255) cTGCATGTTCCTGTTCCTGGAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAg < 2:5156905/150‑1 (MQ=255) gCATGTTCCTGTTCCTGGAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCTCTGGATCTCCGCAACCCTCAAGGa < 2:3736757/150‑1 (MQ=255) gCATGTTCCTGTTCCTGGAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGa < 2:3470077/150‑1 (MQ=255) gCATGTTCCTGTTCCTGGAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGa < 1:3050787/150‑1 (MQ=255) gctgcccgaagagatcatgccggtgtacctgtacctgatggggccggacagcacaggggtgaacgggcaggcgttcaacgcccaataaacctgtacCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGAt < 1:4785376‑M1/54‑1 (MQ=255) aTGTTCCTGTTCCTGGAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGAtt < 1:3487224/150‑1 (MQ=255) aTGTTCCTGTTCCTGGAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGAtt < 2:1670834/150‑1 (MQ=255) ctgttcctgGAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGccc < 1:2862576/150‑1 (MQ=255) ctgttcctgGAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGccc < 1:669141/150‑1 (MQ=255) acgagatcatgccggtgtacctgtccctgatggggccggacagcacaggggtgaccgggcaggcgttcaacgcccaataaacctgcatCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCcct > 2:4436539‑M1/89‑150 (MQ=255) aagagatcatgccggtgtacctgtacctgatggggccggacagcacaggggtgaacgggcaggcgttcaacgcccaataaacctgcatCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGCAGGGCGCAACCCTCAAGGATTGCGCcct > 2:2992349‑M1/89‑150 (MQ=255) aagagatcatgccggtgtacctgtacctgatggggccggacagcacaggggtgaacgggcaggcgttcaacgcccaataaacctgcatCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGCAGGGCGCAACCCTCAAGGATTGCGCcct > 1:1332461‑M1/89‑150 (MQ=255) ttCCTGGAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGc > 2:5475547‑M2/1‑149 (MQ=255) gagatcatgccggtgtacctgtacctgatggggccggacagcacaggggtgaacgggcaggcgttcaacgcccaataaacctgcatCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCcctgc > 1:6223121‑M1/87‑150 (MQ=255) agagatcatgccggtgtacctgtacctgatggggccgacagcacaggggtgaacgggcaggcgttcaacgcccaataaacctgcatCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCcctgc > 1:1204382‑M1/87‑150 (MQ=255) agatcatgccggtgtacctgtacctgatggggccggacagcacaggggtgaacgggcaggcgttcaacgcccaataaacctgcatCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCcctgcc < 1:6308746‑M1/65‑1 (MQ=255) tGGAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgt > 2:1430575‑M2/1‑145 (MQ=255) tGGAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgt > 2:5547914‑M2/1‑145 (MQ=255) gggaGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgt > 2:854916‑M2/2‑145 (MQ=255) catgccggtgtacctgtacctgatggggccggacagcacaggggtgaacgggcaggcgttcaacgcccaataaacctgcatCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCtgtg > 2:262781‑M1/82‑150 (MQ=255) atgccggtgtacctgtacctgatggggccggacagcacaggggtgaacgggcaggcgttcaacgcccaataaacctgcatCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTgg > 2:2104369‑M1/81‑150 (MQ=255) atgccggtgtacctgtacctgatggggccggacagcacaggggtgaacgggcaggcgttcaacgcccaataaacctgcatCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTgg > 2:6308746‑M1/81‑150 (MQ=255) tgccggtgtacctgtacctgatggggccggacagcacaggggtgaacgggcaggcgttcaacgcccaataaacctgcacCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTggg > 2:7309960‑M1/80‑150 (MQ=255) gcgcTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtggga > 2:5963853‑M2/1‑141 (MQ=255) gccggtgtacctgtacctgatggggccggacagcacaggggtgaacgggcaggcgttcaacgcccaataaacctgtacCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGa > 1:1902327‑M1/79‑150 (MQ=255) gccggtgtacctgtacctgatggggccggacagcacaggggtgaacgggcaggcgttcaacgcccaataaacctgcatCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGa > 1:5367817‑M1/79‑150 (MQ=255) ccggtgtacctgtacctgatggggccggacagcacaggggtgaacgggcaggcgttcaaagcccaataaacctgcatCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAg > 1:5770741‑M1/78‑150 (MQ=255) gcTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtgggagc > 1:6546342‑M2/1‑139 (MQ=255) cggtgtacctgtacctgatggggccggacagcacaggggtgaacgggcaggcgttcaacgcccaataaacctgcatCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGc > 2:4048487‑M1/77‑150 (MQ=255) cggtgtacctgtacctgatggggccggacagcacaggggtgaacgggcaggcgttcaacgcccaataaacctgcatCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGc > 2:6901145‑M1/77‑150 (MQ=255) cggtgtacctgtacctgatggggccggacagcacaggggtgaacgggcaggcgttcaacgcccaataaacctgcatCGGCCTCTTCGCGGGCCTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGc > 1:223986‑M1/77‑150 (MQ=255) cggtgtacctgtacctgatggggccggacagcacaggggtgaacgggcaggcgttcaacgcccaataaacctgcatCGGCCTCTTCGCGGGCCTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGAGTGCGCCCTGCCTGTGGGAGc > 2:2056320‑M1/77‑150 (MQ=255) cggagtacctgtccctgatggggccggacagcacaggggtgaacgggcaggcgttcaacgcccaataccccggcatCGGCCTCTACGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGc > 1:2835307‑M1/77‑150 (MQ=255) tgcatgcaGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGCAGGGCGCAATCCTTGAGGGTTGCGGTGATcctgtgggagcgg > 2:2564707‑M2/1‑137 (MQ=255) tgcatgcaGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGCAGGGCGCAATCCTTGAGGGTTGCGGTGATcctgtgggagcgg > 1:3586385‑M2/1‑137 (MQ=255) tgcatgcaGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtgggagcgg > 2:2468407‑M2/1‑137 (MQ=255) tgcatgcaGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtgggagcgg > 2:5286116‑M2/1‑137 (MQ=255) gtgtacctgtacctgatggggccggacagcacaggggtgaacgggcaggcgttcaacgcccaatcaacctgcatCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCgg > 2:462195‑M1/75‑150 (MQ=255) gtgtacctgtacctgatggggccggacaacacaggggtgaacgggcaggcgttcaacgcccaataaacctgcatCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCgg > 2:6947531‑M1/75‑150 (MQ=255) catgcaGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCGTGGCCGCGCCCCCCCGGTCCCCCCCACCCCCACGGCTTGCGCCCGGCCGGGGGgggcgggc > 1:1041735/1‑150 (MQ=255) tgcaGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtgggagcgggcaa > 2:3120115‑M2/1‑133 (MQ=255) gCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTTAGCGCTTTCCTGTCCGGGCCTCTGCGCGGGCTTGCCCGCTCCCACAGGATCCCCGCAACCCTCAAGGATTGCGCCCTGcctgtgggagcgggcaagccc > 1:3246778‑M2/1‑129 (MQ=255) gCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtgggagcgggcaagccc > 1:6108293‑M2/1‑129 (MQ=255) tGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAATCCTTGAGGGTTgcggt < 1:3363701/124‑3 (MQ=37) gccggacagcacaggggtgaacgggcaggcgttcaacgcccaataaacctgcatCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGa > 1:1159993‑M1/55‑126 (MQ=255) gTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtgggagcgggctt < 2:1348725‑M2/123‑18 (MQ=255) gggCTGCGGGCTGATCGCTTTCCTGTCCCGGCCTCTTCGCGGGGTTGCCCGCTCCCCCCGGATCCCCGCAACCCTCAAGTTTTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGc < 2:471283/149‑1 (MQ=38) aggcgttcaacgcccaataaacctgcatCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCcctgc < 1:5866172‑M1/64‑1 (MQ=255) GGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATcaggtaca > 2:5141321‑M1/1‑150 (MQ=255) CTTGCCCGCTCCCACAGGCAGGGCGCAATCCTTGAGGGTTGCGGTGATCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATcaggtacagg < 1:2745906‑M1/150‑1 (MQ=255) CTTCCCCGCTCCCACACGAACACCCCAACCCACACGCATTGCCCCCCCCCTGTGGGAGCGGCAAACCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATcaggtacagg > 1:6783251‑M1/1‑150 (MQ=255) TTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGCTGCAGGGGGATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATcaggtacaggt < 2:4986931‑M1/150‑1 (MQ=255) TTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATcaggtacaggt < 2:2708537‑M1/150‑1 (MQ=255) TTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATcaggtacaggt < 2:2179183‑M1/150‑1 (MQ=255) TTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATcaggtacaggt < 2:1052131‑M1/150‑1 (MQ=255) TTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATcaggtacaggt < 1:4508728‑M1/150‑1 (MQ=255) TTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTGTATTGGGCGTTGAACGCCTGCCCGGTCACCCCTGTGCTGTCCGGCCCCATcaggtacaggt < 2:332553‑M1/150‑1 (MQ=255) TTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCGGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATccggtccaggt < 2:1248039‑M1/150‑1 (MQ=255) ccGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtgggagcgggcaagcccgcgaagaggccgatacaggaaagcgatcagcccgcagccaacgccggccgcatacggccttgctggcgcccttccagctgcatgca < 2:1274426‑M2/150‑108 (MQ=255) CCGCTCCCACAGGCAGGGCGCAATCCTTGAGGGTTGCGGTGATCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTacac < 2:6015108‑M1/150‑1 (MQ=255) CCGCTCCCACAGGCAGGGCGCAATCCTTGAGGGTTGCGGTGATCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTacac < 1:4315384‑M1/150‑1 (MQ=255) CCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTacac < 1:6779468‑M1/150‑1 (MQ=255) CCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTacac < 2:4765556‑M1/150‑1 (MQ=255) gCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtgggagcgggcaagcccgcgaagaggccggtacaggaaagcgatcagcccgcagccaacgccggccgcatacggccttgctggcgcccttccagctgcatgcagc < 1:355059‑M2/150‑110 (MQ=255) tCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtgggagcgggcaagcccgcgaagaggccggtacaggaaagcgatcagcccgcagccaacgccggccgcatacggccttgctggcgcccttccagctgcatgcagcgc < 2:6726053‑M2/150‑112 (MQ=255) tCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtgggagcgggcaagcccgcgaagaggccggtacaggaaagcgatcagcccgcagccaacgccggccgcatacggccttgctggcgcccttccagctgcatgcagcgc < 2:6726168‑M2/150‑112 (MQ=255) tCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtgggagcgggcaagcccgcgaagaggccggtacaggaaagcgatcagcccgcagccaacgccggccgcatacggccttgctggcgcccttccagctacatgcagcgc < 2:5849191‑M2/150‑112 (MQ=255) tCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtgggagcgggcaagcccgcgaagaggccggtacaggaaagcgatcagcccgcagccaacgccggccgcatacggcctt < 2:4788929‑M2/121‑83 (MQ=255) TCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCtgt > 2:747140‑M1/1‑116 (MQ=255) cccACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtgggagcgggcaagcccgcgaagaggccgatacaggaaagcgatcagcccgcagccaacgccggccgcatacggccttgctggcgcccttccagctgcatgcagcgct < 1:1712675‑M2/150‑113 (MQ=255) CCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCAt < 2:3613218‑M1/150‑1 (MQ=255) CCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCAt < 1:6625135‑M1/150‑1 (MQ=255) cacaGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtgggagcgggcaagcccgcgaagaggccggtacaggaaagcgatcagcccgcagccaacgccggccgcatacggccttgctggcgcccttccagctgcatgcagcgctcc < 1:1023074‑M2/150‑115 (MQ=255) cacaGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtgggagcgggcaagcccgcgaagaggccggtacaggaaagcgatcagcccgcagccaacgccggccgcatacggccttgctggcgcccttccagctgcatgcagcgctcc < 2:1922622‑M2/150‑115 (MQ=255) CACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATg < 1:7194876‑M1/150‑1 (MQ=255) CACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATg < 1:2436305‑M1/150‑1 (MQ=255) acaGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtgggagcgggcaagcccgcgaagaggccggtacaggaaagcgatcagcccgcagccaacgccggccgcatacggccttgctggcgcccttccagctgcatgcagcgctcca < 1:6505134‑M2/150‑116 (MQ=255) ACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTc > 1:2060682‑M1/1‑104 (MQ=255) ACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGa < 1:2610513‑M1/150‑1 (MQ=255) ACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGa < 2:6588988‑M1/150‑1 (MQ=255) ACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGa < 1:6129008‑M1/150‑1 (MQ=255) ACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGa < 2:5881467‑M1/150‑1 (MQ=255) ACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGa < 2:5732971‑M1/150‑1 (MQ=255) ACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGa < 1:5012159‑M1/150‑1 (MQ=255) ACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGa < 1:3271746‑M1/150‑1 (MQ=255) ACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGa < 1:3385582‑M1/150‑1 (MQ=255) CAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGAt > 1:4765556‑M1/1‑150 (MQ=255) GATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGAtctc < 1:4983645‑M1/150‑1 (MQ=255) tCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGTGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCTTCAGGTACAGGTACACCGGCATGATCTCtt > 2:6440786/1‑150 (MQ=255) tCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCtt > 2:6193872/1‑150 (MQ=255) | CTGCAAGAGTTACGACTGCATGTTCCTGTTCCTGGAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTT > NC_002947/1972023‑1972320 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |