| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,105,047 | G→C | 6.1% | intergenic (‑166/‑39) | PP_1875 ← / → PP_1876 | two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,105,047 | 0 | G | C | 6.1% | 591.8 / 20.6 | 176 | intergenic (‑166/‑39) | PP_1875/PP_1876 | two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base G (120/45); new base C (9/2); total (129/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.30e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 177 total aligned reads displayed.
CTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGG‑CGCCCCTCCGCGGGC‑TTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTGGGGCACCACACTG > NC_002947/2104898‑2105193 | gtggGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGG‑CGCCCCTCCCCGGGC‑ATGCCCGTTCAAAACGGTGCACCTAAGACCCCAGCTGGAACCAACCCCGGGGGGGGCCGGCGAGACCCCGGGGGGGGGCGCAGCgg > 2:6434926/1‑150 (MQ=255) tgtTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGG‑CGCCCCTCCGCGGGC‑GTGCCCCGTGCCCCACGTACAGCCTAGCCCCCGGCTGAACCCCACCCCCGTGGGGGCCGGCAAGCCCCCCGCGGGGCGCGCCCCGGCCCCC‑caaaaa > 2:4118988/1‑150 (MQ=255) attttCTGTTGCTCGCCAGGGGGGGGCGGGTGGG‑GGCCCCGCGGGGGGG‑TTGCCGGTCCCCACTGTTACCGCTTAGCCCCAGGTTGACCGAACGCCTTTTGGGTGGGGGCACGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTga < 2:4085828/148‑1 (MQ=255) aTTTCAGTTGATCGCCAAGCGGGGGCCGCTTGG‑CGCCCCTCCGCGGGC‑GTTCCCCGTCCCAAACGTACAACATAGCCCCACGCGGAACCACACCCCAGGGGGATCCGGCAAACCCCCCGCGGGGGGCCCCGCGGCCCCC‑caaaaaaagag > 2:3972300/1‑145 (MQ=255) gTTGATCGCCAAGCGGGGGCCGCTTGG‑CGCCCCTCCGCGGGCGTTCCCCGTACCC‑CCCGTACAGCATATCCCCACGCGGTACCCCAGCCCGGGGGGGGCGGGCCAGCCCCCGGGGGGGCGCGCCGCGGCCCCC‑CAAAAACAGAGGGTGtt > 2:1065912/1‑150 (MQ=255) ttGATCGCCACGCGGGGGCCGCTTGG‑CGCCCCTCCGCGGGC‑TTGCCCGTTCCCCCCGCTCCAGCTTCGCCCCAGGCGGAACGCAAGCCCTGTGGGAGCGGGCACGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTa < 2:5575201/150‑1 (MQ=38) gCCACGCGGGGGCGGCTTGG‑CGCCCCTCCGGGGGG‑TGGCCCGTGCCCCCCGGTACAGCTTCGCCCCCGGCTGAACGCACGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAgtc < 2:7296657/150‑1 (MQ=38) tgggggggCGGTTGGCCGCCCCGCGGGGGGG‑TGGCCGGTACCCCCGGTTACCGATTCCCCCCTGGAGGACCGCACGCCTTTGGGGGGGGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCa < 2:3300357/148‑1 (MQ=255) ctggg‑CGCCCCCCCGGGGGG‑TGCCCGGTCCCCCCCGGTCCCGATTACCCCCCGGCGCACCGCAACCCCGGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGAcgctcgc < 2:4446034/147‑1 (MQ=255) GCGGGC‑TTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCt < 2:786222‑M1/150‑1 (MQ=255) GC‑TTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGAc < 1:2526399‑M1/150‑1 (MQ=255) gcttgcccgctcccacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGAc > 1:146517‑M2/82‑150 (MQ=255) ttgcccgctcccacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACcg > 1:163356‑M2/80‑150 (MQ=255) TTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACcg < 2:7261634‑M1/150‑1 (MQ=255) CCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCgcgc < 2:5763578‑M1/150‑1 (MQ=255) ccgctcccacagggcttgcgttcagcctggggctaagctgtacctgtgggagcgggcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGcc > 1:5775622‑M2/76‑150 (MQ=255) ccgctcccacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGcc > 1:2127271‑M2/76‑150 (MQ=255) ccgctcccacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcCAAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGcc > 2:5535070‑M2/76‑150 (MQ=255) ccgctcccacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcagaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGcc > 1:1624220‑M2/76‑150 (MQ=255) CCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGcc < 2:2597540‑M1/150‑1 (MQ=255) CCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGcc < 1:6695120‑M1/150‑1 (MQ=255) cgctcccacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcGCAGCGGCCCCC‑aaaaaa < 2:6748460‑M2/18‑1 (MQ=255) cgctcccacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcGCAGCGGCCCCC‑aaaaaa > 1:6748460‑M2/75‑92 (MQ=255) cgctcccacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCg > 1:2007455‑M2/75‑150 (MQ=255) cgctcccacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagccagcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCg > 2:2165333‑M2/75‑150 (MQ=255) CGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCg < 2:4124729‑M1/150‑1 (MQ=255) gctcccacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGa > 2:4440413‑M2/74‑150 (MQ=255) ttCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGaa > 2:3228173/1‑150 (MQ=255) ttCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGaa > 2:1860203/1‑150 (MQ=255) ttCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGaa > 2:1860179/1‑150 (MQ=255) cccACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATc > 1:2839417/1‑150 (MQ=255) ccacagggcttgcgttcagcctggggctaagctgtacctgtgggagcgggcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCg > 2:4727526‑M2/70‑150 (MQ=255) ccacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcGCAGCGGccc > 2:2176869‑M2/70‑79 (MQ=255) ccacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcCAAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCg > 1:1122582‑M2/70‑150 (MQ=255) cacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCt > 2:2804960‑M2/69‑133 (MQ=255) cacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCgg > 2:4790012‑M2/69‑150 (MQ=255) cacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCgg > 1:6936877‑M2/69‑150 (MQ=255) cacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcCAAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCgg > 1:7335523‑M2/69‑150 (MQ=255) cacaGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCgcgc > 1:1917372/1‑142 (MQ=255) cacaGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCgg > 1:1780273/1‑150 (MQ=255) cacaGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCgg > 2:745650/1‑150 (MQ=255) cacaGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCgg > 2:1492531/1‑150 (MQ=255) acagggcttgcgttcagcctggggctaagctgtacctgtgggagcgggcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGt > 1:6547029‑M2/68‑150 (MQ=255) acagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGt > 2:1917332‑M2/68‑150 (MQ=255) cacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTa > 1:136359‑M2/67‑150 (MQ=255) ggcttgcgttcagcctggggctaagctgtacctgtgggagcgggcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAATCTGAGAGTGTTAGGAGTCGTCATGGTCGCTCGCGTGATCGCTTTGCTGGACCGCGCCGAATCGGGACTg > 1:961009‑M2/64‑150 (MQ=255) ggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcCAAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGcc < 2:2289396‑M2/75‑1 (MQ=255) ggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcCAAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGcc < 2:6039416‑M2/75‑1 (MQ=255) ggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcCAAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGcc > 1:2289396‑M2/64‑138 (MQ=255) gTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑aaaaaa < 1:517754/81‑1 (MQ=255) gTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑aaaaaa > 2:517345/1‑81 (MQ=255) tACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTgg > 2:3509117/1‑150 (MQ=255) ttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGgcg > 1:6152749‑M2/61‑150 (MQ=255) gCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGgcgcg > 1:322286/1‑150 (MQ=255) cTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATGTTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGgcgcgc > 2:1934179/1‑150 (MQ=255) ttAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGcc > 2:1765826/1‑150 (MQ=255) ccccAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGa > 1:515289/1‑150 (MQ=255) ccccAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGa > 2:2950848/1‑150 (MQ=255) cccAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTCCTGGCGCGCCTTGaa > 1:353052/1‑150 (MQ=255) ccAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAAc > 1:6481991/1‑150 (MQ=255) ccAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAAc > 1:4850070/1‑150 (MQ=255) cAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAAcc > 1:4774002/1‑150 (MQ=255) cAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAAcc > 2:3421760/1‑150 (MQ=255) aGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAAccc > 1:7334708/1‑150 (MQ=255) ggCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAAcccc < 1:746243/150‑1 (MQ=255) ggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTg > 1:5507278‑M2/46‑150 (MQ=255) tGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGAcgctcgct < 2:3713830/96‑1 (MQ=255) tGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGt > 1:2764710/1‑150 (MQ=255) tGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGt > 1:5876128/1‑150 (MQ=255) tGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGt > 1:4511877/1‑150 (MQ=255) gAACGCACGCCTTGTGGGTGCGGGCACGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGtt < 1:6774447/150‑1 (MQ=255) cAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCgg > 1:6294041/1‑150 (MQ=255) aaGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTa > 1:7065011/1‑67 (MQ=255) aaGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTa < 2:7065011/67‑1 (MQ=255) aaGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGc > 1:958938/1‑150 (MQ=255) tgtgGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACg > 1:2076420/1‑150 (MQ=255) ccctccgCGGGCTTGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGc > 1:4126326/7‑150 (MQ=255) tgggaacgggcaagcccgcggaggggcgcCCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGcc > 1:4371815‑M2/30‑150 (MQ=255) tccgCGGGCTTGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCg > 2:7186409/4‑150 (MQ=255) tccgCGGGCTTGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCg > 2:3448523/4‑150 (MQ=255) tccgCGGGCTTGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCg > 2:5851920/4‑150 (MQ=255) ggAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCg > 1:3844028/1‑150 (MQ=255) ggAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCg > 1:4938337/1‑150 (MQ=255) gAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGc > 2:5503543/1‑150 (MQ=255) gAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGc > 2:2895177/1‑150 (MQ=255) aGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGc > 1:108626/1‑150 (MQ=255) cgggcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGcaca > 1:3424562‑M2/24‑150 (MQ=255) gggcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACAt > 2:3026130‑M2/23‑150 (MQ=255) ggcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATc > 2:1542456‑M2/22‑150 (MQ=255) ggaaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATc < 2:5828292‑M2/129‑1 (MQ=255) cccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTgg > 2:426598‑M2/16‑150 (MQ=255) cccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTgg > 1:3683589‑M2/16‑150 (MQ=255) ccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTggg > 1:2706890‑M2/15‑150 (MQ=255) ccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGAGTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTggg > 2:2719400‑M2/15‑150 (MQ=255) cgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTgggg > 1:4955413‑M2/14‑150 (MQ=255) gcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTGGGGc > 2:5916649‑M2/13‑150 (MQ=255) ggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTGGGGcac > 2:5245627‑M2/11‑150 (MQ=255) aggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTGGGGcacca < 1:4091441‑M2/142‑1 (MQ=255) gggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTGGGGCACcaca > 2:7413128‑M2/7‑150 (MQ=255) cgcGCAGCGGCCCCC‑AAAAAACTGAGATTGATAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTGGGGCACCACACTg > 2:6721175‑M2/4‑150 (MQ=255) | CTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGG‑CGCCCCTCCGCGGGC‑TTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTGGGGCACCACACTG > NC_002947/2104898‑2105193 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |