| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,105,048 | C→A | 5.1% | intergenic (‑167/‑38) | PP_1875 ← / → PP_1876 | two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,105,048 | 0 | C | A | 5.1% | 605.0 / 15.2 | 176 | intergenic (‑167/‑38) | PP_1875/PP_1876 | two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base C (122/45); new base A (7/2); total (129/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 176 total aligned reads displayed.
GTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGG‑CGCCCCTCCGCGGGC‑TTGCCCGTTCCCACAGGTACA‑GCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTGGGGCACCACACTG > NC_002947/2104904‑2105193 | ctgtTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGG‑CGCCCCTCCGCGGGC‑GTGCCCCGTACCCCACGTAAA‑GCTTAGCCCCCCGCGGAACGCAACCCCCGTGGGAGCGGGCAAGCCCCCCGCGGGGCGCGCACCGGCCCCC‑aaaaa > 2:5279145/1‑150 (MQ=255) aGTTGATCGCCAAGCGGGGGCCGCTTGG‑CGCCCCTCCGCGGGC‑TTGCCCGTTCCCACAGGTACA‑GCTTAGCCCCAGGCGGAACCCAAGCCCGGGGGGAGCGGGCAAGCCCGCGGAGGGGCCCGCAGCGGCCCCC‑AAAAAACAGAGATTGt > 2:6080649/1‑150 (MQ=39) gTTGATCGCCAAGCGGGGGCCGCTTGG‑CGCCCCTCCGCGGGCGTTCCCCGTACCC‑CCCGTACA‑GCATATCCCCACGCGGTACCCCAGCCCGGGGGGGGCGGGCCAGCCCCCGGGGGGGCGCGCCGCGGCCCCC‑CAAAAACAGAGGGTGtt > 2:1065912/1‑150 (MQ=255) gTTGACCCCCACGGGGGGGCCTCTTGG‑GGCCCCTCGGCGGGT‑TTGCCGGTACCCA‑AGGTTCACGGTTAGCCCCTGGCTCAAGGCCCGCGGTTTGGGTGGGGCCACGCCCGCGGAGGGGCGCGCAGCAGCCCCC‑AAAAAACTGAGATTGtt < 2:3187291/150‑1 (MQ=255) ttGATCGCCAAGCGGGGGCCGCTTGG‑CGCCCCTCCGCGGGC‑GTGCCCCTTCCCACAGGTAAA‑GCGTATCCCCACGCGGCACGCAACCCCCGTGGGGGCGGGCCAGCCCCCGGCGGGGCGCGCCGCGGCCCCC‑CAAAAAAAGAGAATGttt > 2:4669271/1‑149 (MQ=255) gCCACGCGGGGGCGGCTTGG‑CGCCCCTCCGGGGGG‑TGGCCCGTGCCCCCCGGTACA‑GCTTCGCCCCCGGCTGAACGCACGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAgtc < 2:7296657/150‑1 (MQ=38) tgggggggCGGTTGGCCGCCCCGCGGGGGGG‑TGGCCGGTACCCCCGGTTACC‑GATTCCCCCCTGGAGGACCGCACGCCTTTGGGGGGGGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCa < 2:3300357/148‑1 (MQ=255) gCCGCTTGG‑CGCCCCTCCGCGGGC‑GTTCCCGTTCCCACAGGTACA‑CCATAGCCCCAGGCGGAAACCAACCCCGGTGGGAGCGGGCAAGCCCGCCGAGGGGCGCGCAGCGGCCCCC‑AAAAAAATGAGAATTTTAGGAGTAGGCAAGGaacc > 2:486577/1‑147 (MQ=255) cgggg‑CGCCCCCCCGCGGGC‑GGGCCCGTGCCCACGGGTACC‑GCTACCCCCCCGGCTGACCGCAACCCCGGGGGGTGCGGGAAACCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGAcgctcgc < 2:6556512/147‑1 (MQ=255) CTCCGCGGGC‑TTGCCCGTTCCCACAGGTACA‑GCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCtt < 2:4013535‑M1/150‑1 (MQ=255) CGCGGGC‑TTGCCCGTTCCCACAGGTACA‑GCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTc < 2:4445401‑M1/150‑1 (MQ=255) GCGGGC‑TTGCCCGTTCCCACAGGTACA‑GCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCt < 2:786222‑M1/150‑1 (MQ=255) GC‑TTGCCCGTTCCCACAGGTACA‑GCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGAc < 1:2526399‑M1/150‑1 (MQ=255) gcttgcccgctcccacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGAc > 1:146517‑M2/82‑150 (MQ=255) cttgcccgctcccacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGAcc > 1:4089849‑M2/81‑150 (MQ=255) TTGCCCGTTCCCACAGGTACA‑GCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACcg < 2:7261634‑M1/150‑1 (MQ=255) ttgcccgctcccacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACcg > 1:163356‑M2/80‑150 (MQ=255) GCCCGTTCCCACAGGTACA‑GCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACcgcg < 2:4091441‑M1/150‑1 (MQ=255) GCCCGTTCCCACAGGTACA‑GCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACcgcg < 1:6740212‑M1/150‑1 (MQ=255) GCCCGTTCCCACAGGTACA‑GCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACcgcg < 1:6954311‑M1/150‑1 (MQ=255) ccgctcccacagggcttgcgttcagcctggggctaagctgtacctgtgggagcgggcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGcc > 1:5775622‑M2/76‑150 (MQ=255) ccgctcccacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGcc > 1:2127271‑M2/76‑150 (MQ=255) ccgctcccacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGcc > 2:5664423‑M2/76‑150 (MQ=255) ccgctcccacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGcc > 1:2547482‑M2/76‑150 (MQ=255) ccgctcccacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcCAAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGcc > 2:5535070‑M2/76‑150 (MQ=255) ccgctcccacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcagaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGcc > 1:1624220‑M2/76‑150 (MQ=255) CGTTCCCACAGGTACA‑GCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCg < 2:4124729‑M1/150‑1 (MQ=255) cgctcccacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCg > 1:2007455‑M2/75‑150 (MQ=255) ttCCCACAGGTACA‑GCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGaa > 2:1860203/1‑150 (MQ=255) tcccacagggcttgcgttcagcctggggctaagctgtacctgtgggagcgggcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAAt > 2:2907666‑M2/72‑150 (MQ=255) cccACAGGTACA‑GCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATc > 1:2839417/1‑150 (MQ=255) ccACAGGTACA‑GCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCg > 2:4321210/1‑150 (MQ=255) ccacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcGCAGCGGccc > 2:2176869‑M2/70‑79 (MQ=255) ccacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcCAAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTTGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCg > 2:3398885‑M2/70‑150 (MQ=255) ccacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcCAAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCg > 1:1122582‑M2/70‑150 (MQ=255) cacaGGTACA‑GCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCgcgc < 2:1917372/142‑1 (MQ=255) cacaGGTACA‑GCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCgcgc > 1:1917372/1‑142 (MQ=255) cacaGGTACA‑GCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCgg > 2:1492531/1‑150 (MQ=255) cacaGGTACA‑GCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCgg > 2:745650/1‑150 (MQ=255) cacaGGTACA‑GCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCgg > 1:1780273/1‑150 (MQ=255) cacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCt > 2:2804960‑M2/69‑133 (MQ=255) cacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCgg > 2:4790012‑M2/69‑150 (MQ=255) cacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCgg > 2:1966907‑M2/69‑150 (MQ=255) cacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCgg > 1:6936877‑M2/69‑150 (MQ=255) cacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcCAAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCgg > 1:7335523‑M2/69‑150 (MQ=255) caGGTACA‑GCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGAGTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTa > 1:3314601/1‑150 (MQ=255) acagggcttgcgttcagcctggggctaagctgtacctgtgggagcgggcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGt > 1:6547045‑M2/68‑150 (MQ=255) acagggcttgcgttcagcctggggctaagctgtacctgtgggagcgggcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGt > 1:6547029‑M2/68‑150 (MQ=255) acagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGt > 2:1917332‑M2/68‑150 (MQ=255) cacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTa > 1:136359‑M2/67‑150 (MQ=255) gTACA‑GCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑aaaaaa > 2:517754/1‑81 (MQ=255) gTACA‑GCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑aaaaaa < 1:517345/81‑1 (MQ=255) ggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcCAAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGcc < 2:2289396‑M2/75‑1 (MQ=255) ggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcCAAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGcc > 1:2289396‑M2/64‑138 (MQ=255) ggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcCAAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGcc > 1:6039416‑M2/64‑138 (MQ=255) tgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGgcgc < 2:163356‑M2/91‑1 (MQ=255) gCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGgcgcg > 1:322286/1‑150 (MQ=255) ccccAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGa > 2:2951172/1‑150 (MQ=255) ccccAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGa > 1:515289/1‑150 (MQ=255) cccAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTCCTGGCGCGCCTTGaa > 1:353052/1‑150 (MQ=255) ccAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAAc > 2:5564330/1‑150 (MQ=255) ccAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAAc > 1:6481991/1‑150 (MQ=255) cAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAAcc > 1:4774064/1‑150 (MQ=255) cAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAAcc > 1:4774002/1‑150 (MQ=255) aGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAAccc > 1:7334598/1‑150 (MQ=255) ggCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAAcccc < 1:746243/150‑1 (MQ=255) ggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTg > 1:5507278‑M2/46‑150 (MQ=255) tGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGAcgctcgct < 2:3713830/96‑1 (MQ=255) tGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGt > 1:935297/1‑150 (MQ=255) tGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGt > 1:2764710/1‑150 (MQ=255) tGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGt > 1:4511877/1‑150 (MQ=255) tGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGt > 1:5876128/1‑150 (MQ=255) gAACGCACGCCTTGTGGGTGCGGGCACGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGtt < 1:6774447/150‑1 (MQ=255) aaCGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGa > 2:1782/1‑110 (MQ=255) cGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGcc > 2:5989784/1‑150 (MQ=255) cAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCgg > 1:6294041/1‑150 (MQ=255) aaGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTa < 2:7065011/67‑1 (MQ=255) aaGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGc > 1:959194/1‑150 (MQ=255) ccTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACaa > 2:2631560/1‑150 (MQ=255) tgtgGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACg > 1:2076420/1‑150 (MQ=255) ccctccgCGGGCTTGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGc > 1:4126326/7‑150 (MQ=255) tgggaacgggcaagcccgcggaggggcgcCCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGcc > 1:4371815‑M2/30‑150 (MQ=255) tccgCGGGCTTGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCg > 2:7186409/4‑150 (MQ=255) tccgCGGGCTTGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCg > 2:5852333/4‑150 (MQ=255) tccgCGGGCTTGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCg > 2:5851920/4‑150 (MQ=255) ggAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCg > 1:4938337/1‑150 (MQ=255) ggAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCg > 1:3844028/1‑150 (MQ=255) gAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGc > 2:2895177/1‑150 (MQ=255) aGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGc > 1:108626/1‑150 (MQ=255) gCGGGCACGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGcac < 2:3480285/150‑1 (MQ=255) ggcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATc > 2:1542456‑M2/22‑150 (MQ=255) gcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCg > 2:5826811‑M2/21‑150 (MQ=255) gcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCg > 2:3428198‑M2/21‑150 (MQ=255) gcaagcccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGATTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCg > 2:2358622‑M2/21‑150 (MQ=255) cccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTgg > 1:3683589‑M2/16‑150 (MQ=255) cccgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTgg > 2:426598‑M2/16‑150 (MQ=255) cgcggaggggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTgggg > 1:4955413‑M2/14‑150 (MQ=255) gggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTGGGGCACcaca < 2:3877914‑M2/144‑1 (MQ=255) gggcgcGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTGGGGCACcaca > 2:7413128‑M2/7‑150 (MQ=255) cgcGCAGCGGCCCCC‑AAAAAACTGAGATTGATAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTGGGGCACCACACTg > 2:6721175‑M2/4‑150 (MQ=255) | GTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGG‑CGCCCCTCCGCGGGC‑TTGCCCGTTCCCACAGGTACA‑GCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTGGGGCACCACACTG > NC_002947/2104904‑2105193 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |