| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,246,303 | C→T | 14.4% | intergenic (+58/‑223) | gltX → / → PP_t25 | glutamate‑‑tRNA ligase/tRNA‑Ala |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,246,303 | 0 | C | T | 14.4% | 327.0 / 41.4 | 143 | intergenic (+58/‑223) | gltX/PP_t25 | glutamate‑‑tRNA ligase/tRNA‑Ala |
| Reads supporting (aligned to +/- strand): ref base C (48/64); new base T (11/8); total (71/72) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.19e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.41e-01 | |||||||||||
Only 100 of 147 total aligned reads displayed.
GCTACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATGC > NC_002947/2246154‑2246452 | tACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCaa < 1:3933639/150‑1 (MQ=255) tACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCaa < 2:2128627/150‑1 (MQ=255) tACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCaa < 2:2206149/150‑1 (MQ=255) tACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGGAAATTcga > 2:4963645/1‑148 (MQ=255) ccGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAata < 2:5585183/150‑1 (MQ=255) cGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAatat < 2:1561781/150‑1 (MQ=255) gCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATc < 2:3246969/150‑1 (MQ=255) gCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATc < 2:4057523/150‑1 (MQ=255) ccTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGGGCCCCCG‑GAGGCAAGGGGAAATTCAaaatag > 2:159315/1‑148 (MQ=255) gcCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGGCCGCC‑CAGGCCAGGGTACATTCAATATCGccatc > 2:2157613/1‑146 (MQ=255) gcCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAAAGGTAAATTCAAAATAGCAGTc > 2:3558878/1‑150 (MQ=255) gcCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCACTGGGAGCGGGCGTGCCGGCG‑AATGCGATATTGAATTTACCATTGCATTc < 2:2135906/150‑1 (MQ=37) cAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATTCAAATGTAAATTCAAAATAGCATTCGc > 2:3081980/1‑150 (MQ=255) cAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGGAATGGTAAATTAAATATCGCATTAGc > 2:3082020/1‑150 (MQ=255) cAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGc < 1:1670904/150‑1 (MQ=255) aGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCTGTGGGAGCGGGCGTGCCGGCG‑AATGCGATATTGAATTTACCATTGCATTCGcg < 2:5223677/150‑2 (MQ=25) aGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCCCG‑AAAGCAAATGTAAAATAAAAATAGCATTAGcc > 2:4575059/1‑150 (MQ=255) ggCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCg < 2:3193457/150‑1 (MQ=255) gCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCGGCG‑AATGCGATATTGAATTTACCATTGCATTCGCggg < 1:3756509/150‑1 (MQ=25) gCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCgg < 1:3664574/150‑1 (MQ=255) gCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCgg < 1:942584/150‑1 (MQ=255) ctctGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGc < 1:4852318/150‑1 (MQ=255) tctGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCa < 1:959762/150‑1 (MQ=255) cgggACCGGCTGGGTGGGGGCTCGCAGAACGACCACAAAGCGGGGGAAAAGCTGGGGGCTTCCATCGCCTGATTCAGCTGTGCACCTACCCAGTGGGAGCGGGCGGGCCCGCG‑AATGCAAGGGTAAAGTCAAGCTCGCAGTCGCCGGCAc < 2:1589889/148‑1 (MQ=255) ggACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCGGCG‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGc < 2:6153816/150‑1 (MQ=25) gACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCGGCG‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGcc < 1:2118918/150‑1 (MQ=25) aCCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑ACGGGCAAGGTAAAATCAATATCGCAATCGCCCGCACGccc > 1:6750223/1‑150 (MQ=255) ctgctgGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGc < 2:1267169/150‑1 (MQ=255) ctgctgGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGc < 2:1267197/150‑1 (MQ=255) gctgGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTc < 1:5687378/150‑1 (MQ=255) tggggtgTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGTAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAg > 2:6063095/1‑150 (MQ=255) tgtCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCAATCGCCGGCACGCCCGCTCCCACAGGCCaa > 2:5499685/1‑150 (MQ=255) tgtCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCCCG‑AATGCAATGGTAAATTCAATATCGCATTAGCCGGCACGCCCCCTCCCACAGGCCaa > 2:6743330/1‑150 (MQ=255) aagaaagaAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAAATGCAA‑GGTAAAATAAATATAGCAATAGCCGGCACGCCCCCTCCCCCACGCCCACGaaa > 2:5707139/1‑149 (MQ=255) agaaaAAAAATAGTGGTAAATGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCa < 2:5095561/150‑1 (MQ=255) aaaCAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGGGGCCCCG‑CAGGCCAAGGGGAATTAAAAATAGCAATAGCCCGCACCCCCCCGCCCACACGCCCACAAAACCCCaaaa > 1:4268591/1‑150 (MQ=255) aaaGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGGCCCCG‑CATGCAATGGTAAAATAAAAATCGCAATCCCCCGCCCGCCCGCACCCACAGGCCCACGAAGCCCCACCAAAcc > 1:1810748/1‑150 (MQ=255) ggAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTAGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCACAAAACCGGGGTAgg > 2:6773960/1‑150 (MQ=255) aaaaGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGc < 2:7318273/150‑1 (MQ=255) cTGTTGGCTTCCATCGCCTTATTCTGCTTTGCACCTAACCTGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGTTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTaa < 1:502508/150‑1 (MQ=255) tGGCTTCCAGCGCCTTTTTCAGCTTTGCACCTAACCTGGGGGAGGGGGCGTGCCCGCT‑AATGAAATGTTAAATTCAATCCCGCATTCGCCGCCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGa < 1:3389319/150‑1 (MQ=255) gCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGAtt < 2:4272840/150‑1 (MQ=255) cATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATAGCGCAGTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTAt < 1:3076689/150‑1 (MQ=255) aTCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATc < 2:6947518/150‑1 (MQ=255) aTCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCCGGCCCCCC‑CAAGCAAAGGTTAAATAAAAATAGCAAAAGCCCGCCCCCCCCCGCCCACAAGCCCAAAAAGCCCCCAAAAAACCCGGTAGGGCGGGAACTGAATTTTAta > 2:6370976/1‑149 (MQ=255) cGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATAGCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCtg < 2:4121878/150‑1 (MQ=255) cAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGc > 1:1787495/1‑78 (MQ=255) cAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAAAATAGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCCAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGTAAAAAt > 2:6025483/1‑150 (MQ=255) gCTTGGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATACAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAAttt < 2:2595410/150‑1 (MQ=255) cTTTGCACCTAACCTGTGGGCGCGGGCGTGCCCGCG‑AATGCAATGTTAAATTCAATATCGCATTCGCCGCCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAAtttt < 1:2133683/150‑1 (MQ=255) tttGCACCTCACCCGTGGGAGCGGGGGTGCCCGCG‑AATGAATTGTTAAATACAATATCGCATGCGCCGCCCCGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAAttttt < 1:5700266/150‑1 (MQ=255) tttGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAAttttt < 2:6377067/150‑1 (MQ=255) ttggCACCTAACCTGTGGGAGCGGGCGTGCCCGCG‑AATGATATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAAttttt < 1:4846639/147‑1 (MQ=255) caCCAGGGGGAGCGGGCGGGCCCGCG‑ACTGCAATGGTAAATGCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATAtttt < 2:7098956/149‑1 (MQ=255) aCCAGGGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAACAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATAttttt < 2:1975215/150‑1 (MQ=255) aGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGaa < 2:6416633/150‑1 (MQ=255) gggAGGGGGCGGGCCCGGG‑ATTGCAATGGTAAATTCAATATCGCTTTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAAt < 1:2775288/150‑1 (MQ=255) gggAGCGGGCGTGCCCGCG‑ACTGCAATGGTAAATGCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAAt < 1:3622557/150‑1 (MQ=255) gtggggggGTGCCGGCT‑AATGCTATGTTAATTTCAATATCGCATTCGCCGTCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAAGCGGGTTAGGGCGGTAAGTGATTGTTATATGTGAAAAAATTTTTGAATATTTTTGAAAATTa < 1:5369211/146‑1 (MQ=255) gAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTa < 2:1478785/150‑1 (MQ=255) cGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGtt < 2:6748273/150‑1 (MQ=255) gggCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGttt > 2:3638697/1‑150 (MQ=255) gggCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGttt > 2:1408577/1‑150 (MQ=255) gggCGTGCCCGCG‑AATGAATTGTTAAATCCAATATCGCATTCGCCGCCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGttt < 1:159315/150‑1 (MQ=255) cGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGAc > 1:157994/1‑150 (MQ=255) gTGCCGGCG‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAACTAATCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAAGTAGTTTGACa > 1:5181905/1‑150 (MQ=21) gTGCCGGCG‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGCAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACa > 1:5478791/1‑150 (MQ=25) tGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAg > 2:5276365/1‑150 (MQ=255) ccggcg‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACTGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAATTTTTTTGAATATTTTTGATAATTAGTTTGACatcg > 2:6477379/4‑147 (MQ=21) ccggcg‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTCGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGcc > 1:4418188/4‑150 (MQ=25) ccggcg‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGcc > 1:5798451/4‑150 (MQ=25) cccGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCTCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGcc > 1:4455424/1‑150 (MQ=255) cccGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGcc < 2:923103/150‑1 (MQ=255) cggcg‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCTCGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGGTTGACAGccc > 2:6892553/3‑150 (MQ=25) ccGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 1:6381296/1‑150 (MQ=255) ccGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 2:5448927/1‑150 (MQ=255) cgcg‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccat > 1:7222549/1‑148 (MQ=255) cgcg‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCt > 1:7220280/1‑150 (MQ=255) gcg‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTg > 2:7031801/1‑150 (MQ=37) gcg‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAg < 1:768442/137‑1 (MQ=255) gcg‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAg > 2:768442/1‑137 (MQ=255) gcg‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTg > 1:3218447/1‑150 (MQ=255) gcg‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGAGTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTg > 1:3218023/1‑150 (MQ=255) g‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAATATTTTTGTATATTTTTGATAATTAGTTTGACAGCCCTGCa > 1:4946076/1‑150 (MQ=255) g‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCa > 2:4815192/1‑150 (MQ=255) aaTGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAATATTTTTGAATATTTTTGAAAATTAGTTTGTCAGCCCTGCAATCCGa > 1:5050325/1‑150 (MQ=255) aaTGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGa > 2:6775956/1‑150 (MQ=255) aaTGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGa > 2:2260016/1‑150 (MQ=255) aaTGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGa > 1:4962103/1‑150 (MQ=255) aaTGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGa > 1:5008991/1‑150 (MQ=255) aaTGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGa > 1:6145719/1‑150 (MQ=255) tgttAAATCCAATCCCGCATCCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAAc < 1:3424091/147‑1 (MQ=255) gTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACtt > 1:877851/1‑150 (MQ=255) gTAAATTCAATACCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACtt > 2:950958/1‑150 (MQ=255) tAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTa < 2:4496974/150‑1 (MQ=255) aTTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAata > 1:3015809/1‑150 (MQ=255) ttCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAatat > 1:253186/1‑150 (MQ=255) ttCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAatat > 2:2803745/1‑150 (MQ=255) ttCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGAGTGTTATCTGTGAAAAAAGTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAatat > 2:4635320/1‑150 (MQ=255) cAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTACGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATgc > 1:6343274/1‑150 (MQ=255) | GCTACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATGC > NC_002947/2246154‑2246452 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |