| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,246,306 | T→C | 15.7% | intergenic (+61/‑220) | gltX → / → PP_t25 | glutamate‑‑tRNA ligase/tRNA‑Ala |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,246,306 | 0 | T | C | 15.7% | 309.3 / 40.3 | 137 | intergenic (+61/‑220) | gltX/PP_t25 | glutamate‑‑tRNA ligase/tRNA‑Ala |
| Reads supporting (aligned to +/- strand): ref base T (48/55); new base C (11/8); total (73/64) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.56e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.54e-01 | |||||||||||
Only 100 of 143 total aligned reads displayed.
CCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATGCGCC > NC_002947/2246158‑2246455 | ccGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAata < 2:5546531/150‑1 (MQ=255) cGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAatat < 2:1561781/150‑1 (MQ=255) gCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATc < 2:3246969/150‑1 (MQ=255) ccTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGGGCCCCCG‑GAGGCAAGGGGAAATTCAaaatag > 2:159315/1‑148 (MQ=255) tGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCa < 1:6059612/150‑1 (MQ=255) gcCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGGCCGCC‑CAGGCCAGGGTACATTCAATATCGccatc > 2:2157613/1‑146 (MQ=255) gcCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTc < 2:1490357/150‑1 (MQ=255) gcCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAAAGGTAAATTCAAAATAGCAGTc > 2:3558878/1‑150 (MQ=255) gcCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCACTGGGAGCGGGCGTGCCGGCG‑AATGCGATATTGAATTTACCATTGCATTc < 2:2135906/150‑1 (MQ=37) cAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATTCAAATGTAAATTCAAAATAGCATTCGc > 2:3081980/1‑150 (MQ=255) cAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGGAATGGTAAATTAAATATCGCATTAGc > 2:3082020/1‑150 (MQ=255) cAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGc < 1:1670904/150‑1 (MQ=255) ggCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCGGCG‑AATGCGATATTGAATTTACCATTGCATTCGcgg < 1:7445714/150‑3 (MQ=25) ggCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCg < 2:3193457/150‑1 (MQ=255) gCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCTGTGGGAGCGGGCGTGCCGGCG‑AATGCGATATTGAATTTACCATTGCATTCGCggg < 1:5593474/150‑1 (MQ=25) gCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCgg < 2:5168721/150‑1 (MQ=255) gCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCgg < 1:942584/150‑1 (MQ=255) gCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCgg < 1:3664574/150‑1 (MQ=255) ctctGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGc < 1:4852318/150‑1 (MQ=255) gACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCGGCG‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGcc < 1:2118918/150‑1 (MQ=25) aCCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCGGCG‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGccc < 2:6150394/150‑1 (MQ=25) ctgctgGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGc < 2:1267197/150‑1 (MQ=255) ctgctgGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGc < 1:5038258/150‑1 (MQ=255) tgctgGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCt < 2:4624781/150‑1 (MQ=255) gctgGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTc < 1:5687378/150‑1 (MQ=255) tggggtgTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGTAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAg > 2:6063095/1‑150 (MQ=255) tgtCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCAATCGCCGGCACGCCCGCTCCCACAGGCCaa > 2:5499685/1‑150 (MQ=255) tgtCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCCCG‑AATGCAATGGTAAATTCAATATCGCATTAGCCGGCACGCCCCCTCCCACAGGCCaa > 2:6743330/1‑150 (MQ=255) gaagaaAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGGCCGCG‑AAATCAAAGGTTAATTAAAAATAGCATTAGCCCGCCCCCCCGCACCCACACCCCAAC‑aaa > 2:6379999/1‑150 (MQ=255) aagaaagaAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGGGTGCCCGCG‑AAAGCCAAGGTAAATTAAAAATAGCATTAGCCGGCCCGCCCCCGCCCACAGGCCCAC‑GAAg > 2:5707150/1‑150 (MQ=255) aagaaagaAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAAATGCAA‑GGTAAAATAAATATAGCAATAGCCGGCACGCCCCCTCCCCCACGCCCAC‑Gaaa > 2:5707139/1‑149 (MQ=255) agaaaAAAAATAGTGGTAAATGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCa < 2:5095561/150‑1 (MQ=255) aaaCAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGGGGCCCCG‑CAGGCCAAGGGGAATTAAAAATAGCAATAGCCCGCACCCCCCCGCCCACACGCCCAC‑AAAACCCCaaaa > 1:4268591/1‑150 (MQ=255) aaaGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGGCCCCG‑CATGCAATGGTAAAATAAAAATCGCAATCCCCCGCCCGCCCGCACCCACAGGCCCAC‑GAAGCCCCACCAAAcc > 1:1810748/1‑150 (MQ=255) ggAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTAGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCACAAAACCGGGGTAgg > 2:6773960/1‑150 (MQ=255) aaaaGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGc < 2:7318273/150‑1 (MQ=255) cTGTTGGCTTCCATCGCCTTATTCTGCTTTGCACCTAACCTGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGTTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTaa < 1:502508/150‑1 (MQ=255) tGGCTTCCAGCGCCTTTTTCAGCTTTGCACCTAACCTGGGGGAGGGGGCGTGCCCGCT‑AATGAAATGTTAAATTCAATCCCGCATTCGCCGCCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGa < 1:3389319/150‑1 (MQ=255) aTCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATc < 2:6947518/150‑1 (MQ=255) aTCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCCGGCCCCCC‑CAAGCAAAGGTTAAATAAAAATAGCAAAAGCCCGCCCCCCCCCGCCCACAAGCCCAA‑AAAGCCCCCAAAAAACCCGGTAGGGCGGGAACTGAATTTTAta > 2:6370976/1‑149 (MQ=255) tCGCCTGTTTCCGCTTTGCACCTAACCAGTGGGAGGGGGGGGGCCCGCG‑ATTGAAATGTTAAATTCAATAGCGCATTCGCCGCCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCt < 1:5361173/150‑1 (MQ=255) cGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATAGCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCtg < 2:4121878/150‑1 (MQ=255) cAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGc < 2:1787495/78‑1 (MQ=255) cAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGc > 1:1787495/1‑78 (MQ=255) gCTTGGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATACAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAAttt < 2:2595410/150‑1 (MQ=255) cTTTGCACCTAACCTGTGGGCGCGGGCGTGCCCGCG‑AATGCAATGTTAAATTCAATATCGCATTCGCCGCCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAAtttt < 1:2133683/150‑1 (MQ=255) tttGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAAttttt < 2:6377067/150‑1 (MQ=255) tttGCACCTAACCAGTGGGAGCGGGCCTGCCCCCC‑AAATCAAATGTAAAATAAAAAAAGCATTCGCCCGCACCCCCCCGCCCACAGGCCCACAAAACCCCCAAAAAACCGGGGT‑GGGCGGTAAGTGAATTTTAAATGTGAAAAAAatttt > 2:1360883/1‑150 (MQ=255) ttggCACCTAACCTGTGGGAGCGGGCGTGCCCGCG‑AATGATATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAAttttt < 1:4846639/147‑1 (MQ=255) caCCAGGGGGAGCGGGCGGGCCCGCG‑ACTGCAATGGTAAATGCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATAtttt < 2:7098956/149‑1 (MQ=255) ctgTGGGAGCGGGCGTGCCGGCG‑AATGCGCTATTGAAATTAACATTGCATTCGCGGGCCCGCCCGCTCCCACAGGCCAAC‑TAAGCCCCCAAAAACCGGGGTAGGGCGGTAAGTGATTGGTATCTGGGGAAAAATTTTTGAATATTTTTGa > 2:5278931/3‑150 (MQ=18) gggAGGGGGCGGGCCCGGG‑ATTGCAATGGTAAATTCAATATCGCTTTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAAt < 1:2775288/150‑1 (MQ=255) gggAGCGGGCGTGCCCGCG‑ACTGCAATGGTAAATGCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAAt < 1:3622557/150‑1 (MQ=255) gtggggggGTGCCGGCT‑AATGCTATGTTAATTTCAATATCGCATTCGCCGTCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAAGCGGGTTAGGGCGGTAAGTGATTGTTATATGTGAAAAAATTTTTGAATATTTTTGAAAATTa < 1:5369211/146‑1 (MQ=255) gAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTa < 2:1478785/150‑1 (MQ=255) ggggCGTGCCCGCG‑AATGCAATGGTAAATACAATAGCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGtt < 1:4963645/149‑1 (MQ=255) cGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGtt > 2:444999/1‑150 (MQ=255) gggCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGttt > 2:3638697/1‑150 (MQ=255) gggCGTGCCCGCG‑AATGAATTGTTAAATCCAATATCGCATTCGCCGCCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGttt < 1:159315/150‑1 (MQ=255) gCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCCGTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGa < 2:6750223/150‑1 (MQ=255) gCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGa > 1:3304364/1‑150 (MQ=255) cGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGAc > 1:157994/1‑150 (MQ=255) cGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGAc > 1:888108/1‑150 (MQ=255) gTGCCGGCG‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAAC‑TAATCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAAGTAGTTTGACa > 1:5181905/1‑150 (MQ=21) tGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAg > 2:5276365/1‑150 (MQ=255) ccggcg‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACTGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAATTTTTTTGAATATTTTTGATAATTAGTTTGACatcg > 2:6477379/4‑147 (MQ=21) ccggcg‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACTGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACATcc > 1:3111113/4‑150 (MQ=21) ccggcg‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTCGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGcc > 1:4418188/4‑150 (MQ=25) ccggcg‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGcc > 1:5798451/4‑150 (MQ=25) cccGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCTCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGcc > 1:4455424/1‑150 (MQ=255) cccGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGcc < 2:923103/150‑1 (MQ=255) cggcg‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCTCGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGGTTGACAGccc > 2:6892553/3‑150 (MQ=25) ccGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 1:6381296/1‑150 (MQ=255) ccGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 2:5448927/1‑150 (MQ=255) cgcg‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCt > 1:7043029/1‑150 (MQ=255) cgcg‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCt > 1:7220280/1‑150 (MQ=255) gcg‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTg > 2:7031801/1‑150 (MQ=37) gcg‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAg > 2:768442/1‑137 (MQ=255) gcg‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGAGTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTg > 1:3218023/1‑150 (MQ=255) g‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCa > 2:4815192/1‑150 (MQ=255) aaTGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGa > 2:2260016/1‑150 (MQ=255) aaTGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGa > 1:4962103/1‑150 (MQ=255) gTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACtt > 1:877851/1‑150 (MQ=255) gTAAATTCAATACCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACtt > 2:950958/1‑150 (MQ=255) tAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTa < 2:4496974/150‑1 (MQ=255) aTTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAata > 1:3015809/1‑150 (MQ=255) aTTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAata > 1:4922319/1‑150 (MQ=255) ttCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTTGTTTGACAGCCCTGCAATCCGAACTTAat > 2:3820624/1‑148 (MQ=255) ttCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTCGTTTGACAGCCCTGCAATCCGAACTTAat < 1:3820624/148‑1 (MQ=255) ttCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAatat > 1:3516318/1‑150 (MQ=255) ttCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAatat > 2:6791467/1‑150 (MQ=255) ttCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAatat > 1:253186/1‑150 (MQ=255) ttCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAatat > 2:116992/1‑150 (MQ=255) ttCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAatat > 2:2803745/1‑150 (MQ=255) ttCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGAGTGTTATCTGTGAAAAAAGTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAatat > 2:4635320/1‑150 (MQ=255) cAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTACGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATgc > 1:6343274/1‑150 (MQ=255) cAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATgc < 1:6379999/150‑1 (MQ=255) aaTATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATgcg > 1:746416/1‑150 (MQ=255) tatCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATGCGcc > 2:40870/1‑150 (MQ=255) tatCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATGCGcc > 2:1080017/1‑150 (MQ=255) | CCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATGCGCC > NC_002947/2246158‑2246455 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |