BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	2,276,920	T→C	5.6%	intergenic (+136/‑6)	PP_t33 → / → PP_t34	tRNA‑Asp/tRNA‑Asp

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	2,276,920	0	T	C	5.6%	874.3 / 21.9	265	intergenic (+136/‑6)	PP_t33/PP_t34	tRNA‑Asp/tRNA‑Asp
Reads supporting (aligned to +/- strand): ref base T (163/87); new base C (8/7); total (171/94)
Fisher's exact test for biased strand distribution p-value = 4.08e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 272 total aligned reads displayed.

CGTCCGCTGCGCCATCTTCGTTTCAAGGTCCCTAGAACACCTTGAAGCAAACACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAGGCCCCATGAACGCCTTGACGCAACGTTAAAGCGACCTTCGGGTCGCTTTTTTCG  >  NC_002947/2276771‑2277069

   ccGCTGCGCCATCTTCGTTTCAAGGTCCCTAGAACACCTTGAAGCAAACACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGAt                                                                                                                                                    <  2:224209/150‑1 (MQ=255)

      cTGCGCCATCTTCGTTTCAAGGTCCCTAGAACACCTTGAAGCAAACACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACg                                                                                                                                                 >  2:2627404/1‑150 (MQ=255)

         cgcCATCTTCGTTTCAAGGTCCCTAGAACACCTTGAAGCAAACACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAg                                                                                                                                              >  2:5207115/1‑150 (MQ=255)

          gcCATCTTCGTTTCAAGGTCCCTAGAACACCTTGAAGCAAACACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGc                                                                                                                                             <  1:6530769/150‑1 (MQ=255)

          gcCATCTTCGTTTCAAGGTCCCTAGAACACCTTGAAGCAAACACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGc                                                                                                                                             >  2:2569420/1‑150 (MQ=255)

           ccATCTTCGTTTCAAGGTCCCTAGAACACCTTGAAGCAAACACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCg                                                                                                                                            >  1:663878/1‑150 (MQ=255)

            cATCTTCGTTTCAAGGTCCCTAGAACACCTTGAAGCAAACACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCgg                                                                                                                                           >  1:6748740/1‑150 (MQ=255)

            cATCTTCGTTTCAAGGTCCCTAGAACACCTTGAAGCAAACACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCgg                                                                                                                                           >  1:237037/1‑150 (MQ=255)

            cATCTTCGTTTCAAGGTCCCTAGAACACCTTGAAGCAAACACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCgg                                                                                                                                           >  2:2889127/1‑150 (MQ=255)

               cTTCGTTTCAAGGTCCCTAGAACACCTTGAAGCAAACACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGTGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAg                                                                                                                                        <  1:1719712/150‑1 (MQ=255)

                ttCGTTTCAAGGTCCCTAGAACACCTTGAAGCAAACACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGACGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGt                                                                                                                                       >  2:3962508/1‑150 (MQ=255)

                ttCGTTTCAAGGTCCCTAGAACACCTTGAAGCAAACACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGt                                                                                                                                       >  1:3557812/1‑150 (MQ=255)

                ttCGTTTCAAGGTCCCTAGAACACCTTGAAGCAAACACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGt                                                                                                                                       >  1:389897/1‑150 (MQ=255)

                ttCGTTTCAAGGTCCCTAGAACACCTTGAAGCAAACACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGt                                                                                                                                       >  2:326610/1‑150 (MQ=255)

                 tCGTTTCAAGGTCCCTAGAACACCTTGAAGCAAACACAAGAGAAGCGATCGCGTTATCGCTTTTTTTTTGCCTGCCCTGAGGCAATCGCGCCGGAAGGGTAGACACAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGtt                                                                                                                                      >  2:637562/1‑150 (MQ=255)

                 tCGTTTCAAGGTCCCTAGAACACCTTGAAGCAAACACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGtt                                                                                                                                      <  2:4472613/150‑1 (MQ=255)

                 tCGTTTCAAGGTCCCTAGAACACCTTGAAGCAAACACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATAGGGCGCAAGCCTGAATGATACGCAGCGGTAGtt                                                                                                                                      >  2:903749/1‑150 (MQ=255)

                   gTTTCAAGGTCCCTAGAACACCTTGAAGCAAACACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCa                                                                                                                                    <  2:3865473/150‑1 (MQ=255)

                    tttCAAGGTCCCTAGAACACCTTGAAGCAAACACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAg                                                                                                                                   >  2:5928907/1‑150 (MQ=255)

                    tttCAAGGTCCCTAGAACACCTTGAAGCAAACACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAg                                                                                                                                   >  2:1616750/1‑150 (MQ=255)

                      tCAAGGTCCCTAGAACACCTTGAAGCAAACACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTc                                                                                                                                 >  2:1894328/1‑150 (MQ=255)

                        aaGGTCCCTAGAACACCTTGAAGCAAACACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCgg                                                                                                                               >  2:4893640/1‑150 (MQ=255)

                         aGGTCCCTAGAACACCTTGAAGCAAACACAAGAGAAGCGATCGCGTTATCGATTTTTTTGTGCCTGCCCTGAGGCCATCGCGCAGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGt                                                                                                                              <  2:2038659/150‑1 (MQ=255)

                           gTCCCTAGAACACCTTGCAGCAAACACACGAGAAGCGATCGCGTGAGCGCTTTTTGTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCCGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTa                                                                                                                            <  2:5795985/150‑1 (MQ=38)

                           gTCCCTAGAACACCTTGAAGCAAACACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTa                                                                                                                            >  1:2355451/1‑150 (MQ=255)

                           gTCCCTAGAACACCTTGAAGCAAACACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTa                                                                                                                            <  2:3557812/150‑1 (MQ=255)

                             cccTAGACCACCTTGAAGCAATCACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGa                                                                                                                          <  2:5250945/150‑1 (MQ=255)

                             cccTAGAACACCTTGAAGCAAACACAAGAGAAGCGATCGCGTTATCGCCTTATTTGTGCCGGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCCTGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGa                                                                                                                          <  2:1913162/150‑1 (MQ=38)

                              ccTAGAACACCTTGAAGCAAACACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGaa                                                                                                                         >  1:684929/1‑150 (MQ=255)

                                tAGAACACCTTGAAGCAAACACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATa                                                                                                                       >  2:4146025/1‑150 (MQ=255)

                                tAGAACACCTTGAAGCAAACACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATa                                                                                                                       >  1:1461826/1‑150 (MQ=255)

                                tAGAACACCTTGAAGCAAACACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGGTAGAATa                                                                                                                       >  2:5527204/1‑150 (MQ=255)

                                 aGAACACCTTGAAGCAAACACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATAc                                                                                                                      >  2:2320181/1‑150 (MQ=255)

                                         ttGAAGCAAACACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGt                                                                                                              >  2:741855/1‑150 (MQ=255)

                                         ttGAAGCAAACACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGt                                                                                                              >  2:5086045/1‑150 (MQ=255)

                                         ttGAAGCAAACACAAGAGAAGCGATCGCGTTAACGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGt                                                                                                              >  2:5491257/1‑150 (MQ=255)

                                          tGAAGCAAACACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTc                                                                                                             >  1:2726747/1‑150 (MQ=255)

                                            aaGCAAACACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCAc                                                                                                           >  1:2203078/1‑150 (MQ=255)

                                               cAAACACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGcc                                                                                                        >  2:2211948/1‑150 (MQ=255)

                                               cAAACACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGcc                                                                                                        >  2:1137727/1‑150 (MQ=255)

                                                aaaCACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTATACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCg                                                                                                       >  1:2981541/1‑150 (MQ=255)

                                                 aaCACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCgg                                                                                                      >  1:942403/1‑150 (MQ=255)

                                                    acaAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCggggg                                                                                                   >  2:2413426/1‑150 (MQ=255)

                                                    acaAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCggggg                                                                                                   >  2:623026/1‑150 (MQ=255)

                                                    acaAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCAggggg                                                                                                   >  1:378670/1‑150 (MQ=255)

                                                          gaAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCgg                                                                                             >  1:4602100/1‑150 (MQ=255)

                                                              cGATCGCGTTATCGGTTTTTTTGTGCCTGCGCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGTTACGCAGCGGTAGTTCAGTCGGTTAGATTACCGGCGTGTCACGCCGGGGGTCGCGGGTTc                                                                                         >  1:4040099/1‑150 (MQ=25)

                                                                 tCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGGTTCAATCGGGCGCCAGCCTGAATGATACGCAGCGGTCGTGCAGGCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAg                                                                                      >  2:5138175/1‑150 (MQ=25)

                                                                   gcgTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTc                                                                                    >  1:6221060/1‑150 (MQ=255)

                                                                         tCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTcc                                                                              >  1:5299819/1‑150 (MQ=255)

                                                                          cGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCg                                                                             <  2:2510051/150‑1 (MQ=255)

                                                                           gCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGc                                                                            >  2:5023456/1‑150 (MQ=255)

                                                                           gCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGc                                                                            >  2:5203655/1‑150 (MQ=255)

                                                                            cTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCt                                                                           >  2:3301949/1‑150 (MQ=255)

                                                                            cTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGAGACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCt                                                                           >  2:2347717/1‑150 (MQ=255)

                                                                              ttttttGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTgc                                                                         <  2:663878/150‑1 (MQ=255)

                                                                                     tgcctgccCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCt                                                                  >  2:1792613/1‑150 (MQ=255)

                                                                                         tgccCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTg                                                                                                               <  2:788937/101‑1 (MQ=255)

                                                                                         tgccCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGc                                                              >  2:6266826/1‑150 (MQ=255)

                                                                                               gAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAg                                                        <  2:4602100/150‑1 (MQ=255)

                                                                                                aGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAgg                                                       >  2:1071455/1‑150 (MQ=255)

                                                                                                     aTCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAGGCCCCa                                                  >  1:5079647/1‑150 (MQ=255)

                                                                                                      tCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAGGCCCCAt                                                 <  1:5207115/150‑1 (MQ=255)

                                                                                                       cgcgCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCTGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAGGCCCCATg                                                <  1:609574/150‑1 (MQ=255)

                                                                                                        gcgcCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTc                                                                >  1:3177655/1‑133 (MQ=255)

                                                                                                        gcgcCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGACACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTc                                                                <  2:3177655/133‑1 (MQ=255)

                                                                                                         cgcCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAGGCCCCATGaa                                              >  1:2546624/1‑150 (MQ=255)

                                                                                                            cGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAGGCCCCATGAACGc                                           >  2:6862854/1‑150 (MQ=255)

                                                                                                            cGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAGGCCCCATGAACGc                                           >  2:945998/1‑150 (MQ=255)

                                                                                                             ggAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAGGCCCCATGAACGcc                                          >  1:2097800/1‑150 (MQ=255)

                                                                                                              gatgggTAGACCGAGGTTTCAATATGGCTCATGACTGAATGATTCGCAGCGTTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAGGCCCCATGAACGCCt                                         <  1:6971280/147‑1 (MQ=17)

                                                                                                                 gggTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAGGCCCCATGAACGCCTTGa                                      <  1:4550368/150‑1 (MQ=255)

                                                                                                                  ggTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAGGCCCCATGAACGCCTTGAc                                     <  1:481193/150‑1 (MQ=255)

                                                                                                                   gTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAGGCCCCATGAACGCCTTGACg                                    >  2:3726947/1‑150 (MQ=255)

                                                                                                                      gACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAGGCCCCATGAACGCCTTGACGCaa                                 <  1:3726947/150‑1 (MQ=255)

                                                                                                                         ccAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAGGCCCCATGAACGCCTTGACGCAACGt                              >  1:7362432/1‑150 (MQ=255)

                                                                                                                         ccAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAGGCCCCATGAACGCCTTGACGCAACGt                              >  1:2515678/1‑150 (MQ=255)

                                                                                                                         ccAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAGGCCCCATGAACGCCTTGACGCAACGt                              >  1:4675627/1‑150 (MQ=255)

                                                                                                                         ccAAGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCggg                                                                                                     <  1:5937065/79‑1 (MQ=21)

                                                                                                                          cAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAGGCCCCATGAACGCCTTGACGCAACGtt                             >  2:3761732/1‑150 (MQ=255)

                                                                                                                             gTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGc                                                                                                         <  1:5602755/71‑1 (MQ=34)

                                                                                                                                  aaTCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAGGCCCCATGAACGCCTTGACGCAACGTTAAAGCGAc                     >  1:3069365/1‑150 (MQ=255)

                                                                                                                                    tCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAGGCCCCATGAACGCCTTGACGCAACGTTAAAGCGACCt                   <  1:6564434/150‑1 (MQ=255)

                                                                                                                                    tCGGGCGCAAGCCTGAACGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAGGCCCCa                                                  >  2:7099431/1‑119 (MQ=18)

                                                                                                                                    tCGGGCGCAAGCCTGAACGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAGGCCCCa                                                  <  1:7099431/119‑1 (MQ=18)

                                                                                                                                     cGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAGGacc                                                    >  2:6752663/1‑116 (MQ=25)

                                                                                                                                      gggCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAGGCCCCATGAACGCCTTGACGCAACGTTAAAGCGACCTTc                 >  2:1513038/1‑150 (MQ=255)

                                                                                                                                        gcgcAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAGGCCCCATGAACGCCTTGACGCAACGTTAAAGCGACCTTCgg               <  1:326610/150‑1 (MQ=255)

                                                                                                                                         cgcAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAGGCCCCATGAACGCCTTGACGCAACGTTAAAGCGACCTTCggg              >  1:4423462/1‑150 (MQ=255)

                                                                                                                                          gcAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCgg                                                                                             <  1:5243918/70‑1 (MQ=35)

                                                                                                                                           cAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAGGCCCCATGAACGCCTTGACGCAACGTTAAAGCGACCTTCGGGTc            <  2:2359024/150‑1 (MQ=255)

                                                                                                                                               ccTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAGGCCCCATGAACGCCTTGACGCAACGTTAAAGCGACCTTCGGGTCGCtt        >  1:5755654/1‑150 (MQ=255)

                                                                                                                                                cTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAGGCCCCATGAACGCCTTGACGCAACGTTAAAGCGACCTTCGGGTCGCttt       >  2:7175185/1‑150 (MQ=255)

                                                                                                                                                cTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAGGCCCCATGAACGCCTTGACGCAACGTTAAAGCGACCTTCGGGTCGCttt       >  2:2702796/1‑150 (MQ=255)

                                                                                                                                                 tGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAGGCCCCATGAACGCCTTGACGCaa                                 <  2:6207205/123‑1 (MQ=255)

                                                                                                                                                 tGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAGGCCCCATGAACGCCTTGACGCAAc                                <  1:5038990/124‑1 (MQ=255)

                                                                                                                                                 tGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAGGCCCCATGAACGCCTTGACGCAACGTTAAAGCGACCTTCGGGTCGCtttt      >  1:3378608/1‑150 (MQ=255)

                                                                                                                                                   aaTGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAGGCCCCATGAACGCCTTGACGCAACGTTAAAGCGACCTTCGGGTCGCttttgt    >  1:802660/1‑148 (MQ=255)

                                                                                                                                                    aTGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAGGCCCCATGAACGCCTTGACGCAACGTTAAAGCGACCTTCGGGTCGCTTTTTTc   <  1:1114861/150‑1 (MQ=255)

                                                                                                                                                     tGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAGGCCCCATGAACGCCTTGACGCAACGTTAAAGCGACCTTCGGGTCGCTTTTTTCg  >  2:6087989/1‑150 (MQ=255)

CGTCCGCTGCGCCATCTTCGTTTCAAGGTCCCTAGAACACCTTGAAGCAAACACAAGAGAAGCGATCGCGTTATCGCTTTTTTTGTGCCTGCCCTGAGGCCATCGCGCCGGAAGGGTAGACCCAGGTTTCAATCGGGCGCAAGCCTGAATGATACGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATCTTCGCTTCAAGGCCCCATGAACGCCTTGACGCAACGTTAAAGCGACCTTCGGGTCGCTTTTTTCG  >  NC_002947/2276771‑2277069

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`