BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	2,407,300	A→T	5.0%	L20Q (CTG→CAG)	PP_2103 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	2,407,300	0	A	T	5.0%	1602.3 / 44.0	460	L20Q (CTG→CAG)	PP_2103	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (225/210); new base T (13/11); total (239/221)
Fisher's exact test for biased strand distribution p-value = 8.37e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 501 total aligned reads displayed.

CCACGGCACCGATGCCCCACAGTGGCGCATGCTTGATACCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAGGGCGATGATTCGTCGAACACCGCCGCCTTCAGGCGCACGC  >  NC_002947/2407151‑2407449

 cacGGCACCGATGCCCCACAGTGGCGCATGCTTGATACCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATgcgc‑aggcgcag                                                                                                                                                      >  1:3371643/1‑150 (MQ=255)

     gCACCGATGCCCCACAGTGGCGCATGCTTGATACCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCagcagc                                                                                                                                                  <  1:3150070/150‑1 (MQ=255)

     gCACCGATGCCCCACAGTGGCGCATGCTTGATACCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCagcagc                                                                                                                                                  >  2:4510124/1‑150 (MQ=255)

     gCACCGATGCCCCACAGTGGCGCATGCTTGATACCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCAGGCGC‑AGGCGCagcagc                                                                                                                                                  <  2:4148081/150‑1 (MQ=255)

         cGATGCCCCACAGTGGCGCATGCTTGATACCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCt                                                                                                                                              <  1:2962685/150‑1 (MQ=255)

           aTGCCCCACAGTGGCGCATGCTTGATACCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTg                                                                                                                                            <  1:3973829/150‑1 (MQ=255)

           aTGCCCCACAGTGGCGCATGCTTGATACCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTg                                                                                                                                            <  2:4871436/150‑1 (MQ=255)

            tGCCCCACAGTGGCGCATGCTTGATACCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTgc                                                                                                                                           <  2:3884229/150‑1 (MQ=255)

              ccccACAGTGGCGCATGCTTGATACCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTgcgc                                                                                                                                         <  1:5543035/150‑1 (MQ=255)

               cccACAGTGGCGCATGCTTGATACCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCa                                                                                                                                        >  2:6731603/1‑150 (MQ=255)

               cccACAGTGGCGCATGCTTGATACCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCa                                                                                                                                        <  1:4547403/150‑1 (MQ=255)

               cccACAGTGGCGCATGCTTGATACCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCa                                                                                                                                        <  1:3301104/150‑1 (MQ=255)

                ccACAGTGGCGCATGCTTGATACCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGCAAGGCGCTGCTGCGCC‑TGCGCat                                                                                                                                       <  2:6348660/150‑2 (MQ=255)

                 cacaGTGGCGCATGCTTGATACCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGCAAGGCGCTGCTGCGCC‑TGCGCatg                                                                                                                                      <  1:1187745/150‑3 (MQ=255)

                  acaGTGGCGCATGCTTGATACCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGCAAGGCGCTGCTGCGCC‑TGCGCatgg                                                                                                                                     <  1:4094960/150‑4 (MQ=255)

                  acaGTGGCGCATGCTTGATACCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGtt                                                                                                                                     >  2:1652702/1‑150 (MQ=255)

                     gTGGCGCATGCTTGATACCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTcgc                                                                                                                                  >  2:6633582/1‑150 (MQ=255)

                       ggCGCATGCTTGATACCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTcgcgc                                                                                                                                <  1:1447120/150‑1 (MQ=255)

                           cATGCTTGATACCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGt                                                                                                                            >  2:5902180/1‑150 (MQ=255)

                                ttGATACCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTAcgc                                                                                                                       >  2:369614/1‑150 (MQ=255)

                                ttGATACCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTAcgc                                                                                                                       >  2:5248196/1‑150 (MQ=255)

                                ttGATACCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTAcgc                                                                                                                       >  2:1824966/1‑150 (MQ=255)

                                    tACCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCgtgt                                                                                                                   <  1:2719788/150‑1 (MQ=255)

                                       ccAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGtt                                                                                                                  <  2:3025316/148‑1 (MQ=255)

                                        cAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTgg                                                                                                               >  1:5705626/1‑150 (MQ=255)

                                        cAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTCCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTgg                                                                                                               >  2:3383886/1‑150 (MQ=255)

                                          ggCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGGTGTTCATTTCCATGCTC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCa                                                                                                             <  1:1301716/150‑1 (MQ=255)

                                              ttCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTc                                                                                                         <  1:89371/150‑1 (MQ=255)

                                              ttCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTc                                                                                                         >  1:6585817/1‑150 (MQ=255)

                                               tCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCt                                                                                                        <  1:28127/150‑1 (MQ=255)

                                                   gTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCa                                                                                                    >  1:4292438/1‑150 (MQ=255)

                                                     aGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAgg                                                                                                  <  2:6782377/150‑1 (MQ=255)

                                                          gCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCAt                                                                                             <  2:1752714/150‑1 (MQ=255)

                                                           cTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATg                                                                                            >  2:74696/1‑150 (MQ=255)

                                                              cccATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCa                                                                                         >  1:3039906/1‑150 (MQ=255)

                                                              cccATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCa                                                                                         >  2:3124076/1‑150 (MQ=255)

                                                                  tACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAg                                                                                     <  1:47446/150‑1 (MQ=255)

                                                                   aCCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAgg                                                                                    <  1:6995423/150‑1 (MQ=255)

                                                                    ccGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGgc                                                                                   >  1:4454975/1‑150 (MQ=255)

                                                                     cgcgCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTCCGCGTGTTTg                                                                                                                <  1:2620165/120‑1 (MQ=255)

                                                                     cgcgCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGgcg                                                                                  >  1:2667919/1‑150 (MQ=255)

                                                                     cgcgCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGgcg                                                                                  >  1:6615408/1‑150 (MQ=255)

                                                                      gcgcACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGgcgc                                                                                 <  2:3313965/150‑1 (MQ=255)

                                                                      gcgcACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGgcgc                                                                                 <  1:6185879/150‑1 (MQ=255)

                                                                              ggcgCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTc                                                                         <  2:2554154/150‑1 (MQ=255)

                                                                              ggcgCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTc                                                                         <  2:2614459/150‑1 (MQ=255)

                                                                              ggcgCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTc                                                                         <  2:2671453/150‑1 (MQ=255)

                                                                                 gcAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCtt                                                                      <  2:1439782/150‑1 (MQ=255)

                                                                                 gcAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCtt                                                                      <  1:2496797/150‑1 (MQ=255)

                                                                                 gcAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCtt                                                                      >  1:5888164/1‑150 (MQ=255)

                                                                                 gcAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCtt                                                                      >  2:5149000/1‑150 (MQ=255)

                                                                                  cAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTg                                                                     <  1:1000632/150‑1 (MQ=255)

                                                                                   aGCGGTTCAAGCAACTGACCTGACTCATGACGGATGTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTccaggg                                                                    <  2:3449379/150‑5 (MQ=255)

                                                                                       gTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAg                                                                >  2:1511829/1‑150 (MQ=255)

                                                                                       gTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAg                                                                >  1:3784454/1‑150 (MQ=255)

                                                                                       gTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGAGC‑AGGCGCAGCAGCGACTCGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTAGGCAAg                                                                >  1:1963580/1‑150 (MQ=255)

                                                                                             gCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTtcgtc                                                          >  2:4951302/1‑150 (MQ=255)

                                                                                             gCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTtcgtc                                                          <  1:5438267/150‑1 (MQ=255)

                                                                                             gCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTtcgtc                                                          >  1:2119415/1‑150 (MQ=255)

                                                                                              cAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTtcgtcg                                                         >  1:6455783/1‑150 (MQ=255)

                                                                                                aCTGACCGGACTCATGACGGATTTCCTGGCGGTGCAGTTCCATGCGC‑AGGCGCAGCAGCGCCGTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAg                                                       <  2:7170845/150‑1 (MQ=255)

                                                                                                  tGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAggg                                                     >  2:7265418/1‑150 (MQ=255)

                                                                                                  tGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAg                                                       <  1:2257793/148‑1 (MQ=255)

                                                                                                    aCCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTg                                                   <  1:5949038/150‑1 (MQ=255)

                                                                                                    aCCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTg                                                   >  2:6549542/1‑150 (MQ=255)

                                                                                                        gACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTc                                                                         >  2:4755333/1‑124 (MQ=255)

                                                                                                        gACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGgcgc                                               <  2:6225072/150‑1 (MQ=255)

                                                                                                            cATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGaa                                           <  1:3646347/150‑1 (MQ=255)

                                                                                                             ctGACGGATGTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAg                                          <  2:4296767/149‑1 (MQ=255)

                                                                                                             aTGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTTGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAg                                          >  2:5528977/1‑150 (MQ=255)

                                                                                                             aTGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAg                                          >  2:2367295/1‑150 (MQ=255)

                                                                                                             aTGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAg                                          >  1:5176289/1‑150 (MQ=255)

                                                                                                             aTGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAg                                          >  2:3488696/1‑150 (MQ=255)

                                                                                                              tGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAgg                                                      >  1:3741585/1‑137 (MQ=255)

                                                                                                               gACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAggg                                        <  2:1303858/150‑1 (MQ=255)

                                                                                                               gACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAggg                                        <  2:3784454/150‑1 (MQ=255)

                                                                                                                aCGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAg                                                       <  1:674578/134‑1 (MQ=255)

                                                                                                                aCGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAGGGc                                       <  1:1777793/150‑1 (MQ=255)

                                                                                                                  ggATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAGGGCga                                     <  2:2117755/150‑1 (MQ=255)

                                                                                                                  ggATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAGGGCga                                     >  1:4199932/1‑150 (MQ=255)

                                                                                                                   gATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAGGGCgat                                    <  1:7330758/150‑1 (MQ=255)

                                                                                                                    aTTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTcc                                                                              <  1:3477975/107‑1 (MQ=255)

                                                                                                                    aTTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAGGGCgatg                                   <  2:2825368/150‑1 (MQ=255)

                                                                                                                     tttCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAGGGCgatga                                  <  2:1212322/150‑1 (MQ=255)

                                                                                                                      ttCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAGGGCgatgat                                 >  1:7426823/1‑150 (MQ=255)

                                                                                                                          tGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAGGGCga                                     >  1:4892846/1‑142 (MQ=255)

                                                                                                                           ggCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAGGGCGATGATtcgtc                            <  1:2375883/150‑1 (MQ=255)

                                                                                                                           ggCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAGGGCGATGATtcgtc                            <  1:7262090/150‑1 (MQ=255)

                                                                                                                           ggCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCGGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAGGGCGATGATtcgtc                            <  2:5640292/150‑1 (MQ=255)

                                                                                                                              ggTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATgg                                                                                           >  2:544953/1‑84 (MQ=255)

                                                                                                                                  cATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTc                                                                               >  2:594425/1‑92 (MQ=255)

                                                                                                                                   aTTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAGGGCGATGATTCGTCGAACAccg                    >  1:1931444/1‑150 (MQ=255)

                                                                                                                                    tttCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAGGGCGATGATTCGTCGAACAccgc                   <  1:3933531/150‑1 (MQ=255)

                                                                                                                                      tCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAGGGCGATGATTCGTCGAACAccgccg                 >  1:6911651/1‑150 (MQ=255)

                                                                                                                                        cATGCGC‑AGGAGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGTCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAGGGCGATGATTCGTCGAACACCgccgcc               <  1:5626532/150‑1 (MQ=255)

                                                                                                                                          tGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAGGGCGATGATTCGTCGAACACCGCCGCCtt             <  1:6509858/150‑1 (MQ=255)

                                                                                                                                             gc‑aggcgcagCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAGGGCGATGATTCGTCGAACACCGCCGCCTTCAg          <  2:5363526/150‑1 (MQ=255)

                                                                                                                                              caaggcgctgCTGCGCC‑TGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAGGGCGATGATTCGTCGAACACCGCCGCCTTCAgg         <  1:5369080/148‑1 (MQ=255)

                                                                                                                                              c‑aggcgcagCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAGGGCGATGATTCGTCGAACACCGCCGCCTTCAgg         <  1:5062972/150‑1 (MQ=255)

                                                                                                                                                    gcagcaGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCCAGTTCGTCGAGGGTGGCGCCGAAGGGCGATGATTCGTCGAACACCACCGCCTTCAGGCGCAc    >  2:707413/1‑150 (MQ=255)

CCACGGCACCGATGCCCCACAGTGGCGCATGCTTGATACCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAGGGCGATGATTCGTCGAACACCGCCGCCTTCAGGCGCACGC  >  NC_002947/2407151‑2407449

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`