| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,461,856 | T→G | 6.2% | intergenic (+115/‑66) | gapB → / → PP_2150 | glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,461,856 | 0 | T | G | 6.2% | 577.1 / 13.4 | 197 | intergenic (+115/‑66) | gapB/PP_2150 | glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein |
| Reads supporting (aligned to +/- strand): ref base T (88/91); new base G (6/9); total (94/103) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.95e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 207 total aligned reads displayed.
TGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACC > NC_002947/2461707‑2462005 | ggCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACAGGATTATc < 1:2094319/150‑1 (MQ=255) ggCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACAGGATTATc < 2:2952638/150‑1 (MQ=255) cTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACAGGATTATCGc < 1:4249307/150‑1 (MQ=255) tGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACAGGATTATCGCt < 1:6504282/150‑1 (MQ=255) ggTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACAGGATTATCGCTg < 1:3926399/150‑1 (MQ=255) gtgtGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACAGGATTATCGCTGc < 2:6048327/150‑1 (MQ=255) gtgtGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACAGGATTATCGCTGc < 1:4609163/150‑1 (MQ=255) gtgAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACAGGATTATCGCTGccc < 1:3007843/150‑1 (MQ=255) aaCCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGGTAAACCC‑‑CGCCGACAGGATTATCGCTGgcccgg > 1:2549827/1‑148 (MQ=255) ccGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCGCCTACAGGATTATCGCGGCCCCGGTAg > 1:2915724/1‑150 (MQ=255) ccGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTGTCGC‑GGGTAAACCC‑GCTCCGACACGCGTATCGCTGCCCCTGTAg > 2:4014196/1‑150 (MQ=255) cGCCAGCGTTTCCGCGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACAGGATTATCGCTGCCCCTGTAgg < 1:1706862/150‑1 (MQ=255) cGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACAGGATTATCGCTGCCCCTGTAgg < 1:7444/150‑1 (MQ=255) gCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACAGGATTATCGCTGCCCCTGTAGGa < 1:2658434/150‑1 (MQ=255) gCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACAGGATTATCGCTGCCCCTGTAGGa < 1:6734131/150‑1 (MQ=255) gCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCgg < 1:198763/150‑1 (MQ=255) gCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCgg < 1:1205759/150‑1 (MQ=255) gTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGt < 2:1292338/150‑1 (MQ=255) gTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGt < 2:4531124/150‑1 (MQ=255) tttCCACGCTGATTCGCGTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGtt < 2:4048846/150‑1 (MQ=255) aCGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCAACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTAccc > 2:2421264/1‑150 (MQ=255) aCGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑CCTCCTACAGGATTATCGCTGCCCCTGTACGAGCGGGTTTAacc > 2:6708112/1‑150 (MQ=255) aCGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGACGGCCCTTTCGC‑GGGTAAACAC‑GCTCCTACAGGATTATCTCTGCCCCTGTAGGAGCGGGTTTAccc > 2:1680895/1‑150 (MQ=255) gCTGATTCGCTTGTAAGGCAATGCAAAAACGGGAACCTTCGGGGTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCcgc < 2:6085899/150‑1 (MQ=255) ttttCGCTTGTAAGGCACTGAAAAAACGGCAACCTTCGGGTTCCCT‑TTTTTTTTTATTCTTAATGTGTTTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACCGGTTTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGaa < 2:3118247/148‑1 (MQ=38) taTTCGCTTGTAAGGCAATGAAAAAACGGTAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGaa < 2:5745098/149‑1 (MQ=255) ttCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAaga < 2:6795809/150‑1 (MQ=255) gCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACAGGATTATCGCAGCCCCTGGAGGAGCGGGTTTACCCGCGAAGAGGc > 2:6003961/1‑150 (MQ=255) cTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAAACC‑GCTCCGACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGcc > 1:2963585/1‑150 (MQ=255) gTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCGTCAGGATTATAGCTGCCCCCGTCGGAGCGGGTTTTCCCGCGAAGAGGGCAGc > 2:6219117/1‑150 (MQ=39) gCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACAGGATTATCGCTGCCCCGGTAGGAGCGGGTTTACCCGCGACGAGGCCAGCACCgg > 2:3881051/1‑150 (MQ=255) aaaaaaCGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAAACC‑GCTCCGACAGGATTATCGCTGCCCCGGTAGGAGCGGGTTTTACCGCGAAGAGGCCAGCACCGGccaagg > 1:1054412/1‑145 (MQ=39) aaaaaCGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTCAACCC‑GCACCAACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGACGAGGCCAGCACCGGCACCCga > 2:6277850/1‑150 (MQ=39) aaaaCGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACAGGATTATCGCTGCCCCGGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCgag > 2:5523085/1‑150 (MQ=255) aaaaCGGGAACCCGAAGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACCGGAGTATCGCTGCCCCGGTAGGAGCGGGGTTACCCGCGCAGCGGCCCGCCCCGGCCCCCgag > 2:6030860/1‑150 (MQ=37) aaaCGGGAACCTTCGGGTTCCCGTTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAAACC‑GCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCgag > 2:1102384/1‑150 (MQ=255) ggAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAAACC‑GCTCCGACAGGATTATAGCATCCCCTGTAGGAGCGGGTTTTACCGCGGAGAGGCCAGCACCCGCAACCCAGAAAccc > 2:3160683/1‑150 (MQ=38) cccG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAAACC‑GCTCCTAAAGGAGTATAGCTGCCCCGGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCAACAGTGCGCACAg > 1:3553877/1‑150 (MQ=38) ccgttttttttttATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTACTACAGGATTATCGCTGCCCCGGTAGGAGCGGGTTTAACCGCGAAGTGGCCAGCACCGGCAACCGAGAAAACCTACTGGGCGCACAg > 2:423731/5‑150 (MQ=38) ccG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAAACC‑GCGCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCGACTGTGCGCACAGc > 1:4915707/1‑150 (MQ=255) ccG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCC‑TTCGC‑GGGTAAAACC‑CCGCCGACAGGATTATCGCTGCCCCGGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCACCCGCAACCCAGAAACCCGACAGTGCGcaccgaa > 2:784943/1‑146 (MQ=37) cG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACAGGATTATCGCTGCCCCTGTAgg > 2:6743346/1‑88 (MQ=255) cG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACAGGATTATCGCTGCCCCTGTAgg < 1:6743346/88‑1 (MQ=255) g‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACAGGATTATCGCTGcc < 2:4357873/79‑1 (MQ=255) ttttttttttCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGG‑GGGTAAACCC‑GCTCCTACAGGATTAGCGGTGCCCCTGTTGGCGGGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTAc < 2:1841093/150‑1 (MQ=38) ttttATTCTTATTGTGTTTTGTCTTTGCGGGCCCTTGCGC‑GGTAAAACCC‑GCTCCTACCGTTTTTTCGCTGCCCGTGTTGGTGGGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGt < 1:2771901/150‑1 (MQ=255) tatGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTc < 2:5211326/148‑1 (MQ=255) tCTGTATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTTATGCC‑GCTGCTTCAGGTTTATAGCTGCCGCTGTTGGTGGGGGTTTTCGCGGGTAGAGGGCCGGACGGGCAAGGGAGTAAGCCTAGTGTGGGCGCAGCCCTGGTGTTAAttg > 2:4730813/1‑149 (MQ=255) tCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCcgc > 1:7341340/1‑90 (MQ=255) tCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCAACAGTGCGCACAGCCCTACTGTTCAtta > 2:7201441/1‑149 (MQ=255) tgtgtgTTGTCTGTGCCGGCCCTTTGGC‑‑GGTAAACCCGGCTCCTACCGTTTTTTCGCGCCCGGTTTTGGTGGGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCtgctgc < 1:5796051/150‑1 (MQ=255) tgtgtTGTCAGTGCCGGCCCTTTCGC‑GGGTTAACCC‑GCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGTGGGCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTGATTCTGCTGCTa > 2:192410/1‑150 (MQ=255) gtgtTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑CCGCCTACAGGATTATCGCTGCCCCTGTCGGAGCGGGTTTACCCGCGAAGAGGCCCGCACCGGCAACCGAGAAACCCAACTGTGCGCAAACCCCTACTGTTCCGTCTGCTGCTAc > 2:5130988/1‑150 (MQ=38) tgttgtCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACAGGATTATCGCTGCCCCGGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTGTGGTGCTACt > 2:3214050/1‑150 (MQ=255) tCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACAGGATTATCGCAGCCCCGGTAGGCGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCGACTGTGCGCACAGCCCTACTGTTAATTATGCTGCGACTCACCg > 1:6090866/1‑150 (MQ=38) gTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCt < 1:5466150/150‑1 (MQ=255) gTGCCGGCCCTTCCGC‑GGGTAAACCC‑GCTCCTACCGGATTAGCGCTGCCCCGGTAGGAGCGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCt < 2:2684339/150‑1 (MQ=39) tGCCGGCCCTTTCGC‑GTTTAAACCC‑GCTCCTACAGGTTTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTg < 1:2869170/150‑1 (MQ=255) tGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTg < 2:4178975/150‑1 (MQ=255) ccGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCACCGGCACCCGAGAAACCCTACTGTGCGCACCGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCa > 2:5983785/1‑150 (MQ=255) gCCCTTTCGG‑GGGTAAACCC‑GCTCCTACTGGTTTATCGCGGCCCGTGTCGGAGGGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAAcc < 1:6030860/150‑1 (MQ=255) cTTGCGG‑GGGTAAACCC‑GCTCCTACCGTTTTATCGCGGCCCCTGTTGGAGGGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAg < 1:3832133/150‑1 (MQ=255) gtggc‑gGGTAACCCC‑GCTCCTCCCGGTTTATCGCGGCCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTCCTGGTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGc < 1:5970467/147‑1 (MQ=38) gc‑gGGTAAACCC‑GCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGcccc > 1:1354225/1‑150 (MQ=255) gggTAAACCC‑GCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCAc > 2:3143038/1‑150 (MQ=255) gggTAAACCC‑GCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCt < 2:4976088/134‑1 (MQ=255) acccc‑GCTCCTACCGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTgg < 2:339053/148‑1 (MQ=255) cccc‑GCTCCTACCGGTTTAGCGCGGCCCGTGTCGGTGGGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGa < 1:4040768/149‑1 (MQ=255) aCCC‑GCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGa < 2:7157360/150‑1 (MQ=255) ccc‑GCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAg > 1:5078755/1‑150 (MQ=255) cc‑GCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAgc > 1:3427035/1‑150 (MQ=37) cc‑GCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAgc > 2:696330/1‑150 (MQ=255) gCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAACCCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAgcgc > 2:4652966/1‑150 (MQ=255) gCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAgcgc > 2:4474348/1‑150 (MQ=255) caacaccaTTATCCCTCCCCCTTTAGGAGCGTTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTgg < 1:4480736/143‑1 (MQ=255) cTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTgg < 2:7057056/150‑1 (MQ=255) cTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTgg < 2:2915724/150‑1 (MQ=255) tACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTggg > 2:5778507/1‑150 (MQ=255) tACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTggg > 2:3955335/1‑150 (MQ=255) tACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTggg > 1:6258647/1‑150 (MQ=255) tACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCAGGCGCTCCAggg > 1:7189286/1‑150 (MQ=255) aacttttttATCGGGGCCCCTGTTGGAGGGGTTTAACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTggg < 1:3160683/143‑1 (MQ=255) aCAGGATTCTCGCTGCCCCGGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGggt < 2:656986/150‑1 (MQ=255) aCAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGggt > 1:145729/1‑150 (MQ=255) cAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGggtg > 2:5381456/1‑150 (MQ=255) aGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCt > 2:5953298/1‑144 (MQ=255) aGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCt < 1:5953333/144‑1 (MQ=255) aGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGggtgg > 1:1961325/1‑150 (MQ=255) ggATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGggtggt > 2:6440419/1‑150 (MQ=255) gATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGggt > 2:7356273/1‑146 (MQ=255) gATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTc > 2:3712828/1‑150 (MQ=255) gATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTc < 2:7334456/150‑1 (MQ=255) aTTATCGCTGCCACAGTAGGAGCGCGTTTACCCGCGAAGAGGACAGCACCGGCAACCCAGAAACCCTACTGAGCTCACAGCCCTACTCTTCATTCTGCTGCTACTCACCGCCTGCAACCACGGCCCCACCCAGGAGCGCCTGGGTGGTcc > 2:6398989/1‑150 (MQ=255) ttctCGCGGCCCCTGTAGGTGCGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCGACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCg < 1:7199958/147‑1 (MQ=255) ttATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCg > 1:7001141/1‑150 (MQ=255) aTCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGAc > 1:5568599/1‑150 (MQ=255) tCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGggtg < 2:2277225/142‑1 (MQ=255) tCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGggtg > 1:2277225/1‑142 (MQ=255) tCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGggtg > 1:391248/1‑142 (MQ=255) tCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGAcc > 2:6906094/1‑150 (MQ=255) | TGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGC‑GGGTAAACCC‑GCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACC > NC_002947/2461707‑2462005 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |