Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,510,430 T→C 5.1% L13P (CTG→CCG)  PP_2199 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,510,4300TC 5.1% 1175.7 / 29.7 352L13P (CTG→CCG) PP_2199hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (178/155);  new base C (4/14);  total (183/169)
Fisher's exact test for biased strand distribution p-value = 1.37e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.80e-01

Only 100 of 356 total aligned reads displayed.

CAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTGGGGCCCGGTCGGGCGCGGCAAGACCTGGCTGATGGACC  >  NC_002947/2510281‑2510579
                                                                                                                                                     |                                                                                                                                                     
cAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCt                                                                                                                                                       <  1:967660/150‑1 (MQ=255)
    tGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCCTGGCCCTCGACCCCCAACCCCTCTACCAGCAAGCCCGGAGc                                                                                                                                                   >  2:6957821/1‑150 (MQ=255)
      gTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCAc                                                                                                                                                 <  1:733170/150‑1 (MQ=255)
      gTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCAc                                                                                                                                                 <  1:6167182/150‑1 (MQ=255)
       ttACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACt                                                                                                                                                >  1:1255241/1‑150 (MQ=255)
        tACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTc                                                                                                                                               >  1:1753477/1‑150 (MQ=255)
           cTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCggg                                                                                                                                            >  1:7151126/1‑150 (MQ=255)
           cTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCggg                                                                                                                                            <  2:4907138/150‑1 (MQ=255)
            tgtatgtaCTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCgggg                                                                                                                                           >  2:463671/1‑150 (MQ=255)
              tatgtaCTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCCGAGTGCTCAGGGCt                                                                                                                                         <  2:1280930/150‑1 (MQ=255)
               atgtaCTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCCGAGTGCTCAGGGCtt                                                                                                                                        <  1:1570899/150‑2 (MQ=255)
                tgtaCTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTAc                                                                                                                                       <  1:2994953/150‑1 (MQ=255)
                tgtaCTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTAc                                                                                                                                       <  2:4464234/150‑1 (MQ=255)
                    cTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTg                                                                                                                                   <  1:4324319/150‑1 (MQ=255)
                     tGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGc                                                                                                                                  >  1:5409193/1‑150 (MQ=255)
                     tGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGc                                                                                                                                  >  1:896065/1‑150 (MQ=255)
                      gACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCt                                                                                                                                 >  1:502717/1‑150 (MQ=255)
                        ccGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAATCCCTGAGCACTCGGGGCTACGTTGCTGa                                                                                                                               >  1:5938371/1‑150 (MQ=255)
                         cGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTCCGTTGCTGAc                                                                                                                              >  2:5940303/1‑150 (MQ=255)
                         cGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGAc                                                                                                                              >  2:6731290/1‑150 (MQ=255)
                             gACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTg                                                                                                                          <  2:4497822/150‑1 (MQ=255)
                               cAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGcc                                                                                                                        >  1:6557830/1‑150 (MQ=255)
                               cAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGcc                                                                                                                        >  1:7013068/1‑150 (MQ=255)
                               cAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGcc                                                                                                                        >  2:2436476/1‑150 (MQ=255)
                                aaGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGAcc                                                                                                                             >  1:2415849/1‑144 (MQ=255)
                                aaGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGccc                                                                                                                       >  1:2241374/1‑150 (MQ=255)
                                aaGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGccc                                                                                                                       >  2:437480/1‑150 (MQ=255)
                                     tGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGcc                                                                                                                  >  2:2498526/1‑150 (MQ=255)
                                         gcgcTACTCAAGGTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCCGAGTGCTCAGGGCtt                                                                                                                                        >  2:2007800/1‑123 (MQ=255)
                                             tACTCAAGGTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGcgtcgt                                                                                                          >  2:2384794/1‑150 (MQ=255)
                                              aCTCAAGGTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCgtcgtc                                                                                                         >  2:2179093/1‑150 (MQ=255)
                                                tCAAGGTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGa                                                                                                                                                     >  1:2566046/1‑104 (MQ=255)
                                                tCAAGGTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGtcgtcgc                                                                                                       >  1:6868761/1‑149 (MQ=255)
                                                 cAAGGTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAg                                                                                                      <  1:3298556/150‑1 (MQ=255)
                                                  aaGGTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAgg                                                                                                     >  2:5058014/1‑150 (MQ=255)
                                                     gTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCt                                                                                                  <  1:597575/150‑1 (MQ=255)
                                                      tCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCtt                                                                                                 >  2:4164369/1‑150 (MQ=255)
                                                         gCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAAGGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCa                                                                                              >  1:1108013/1‑150 (MQ=255)
                                                          ccTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCaa                                                                                             <  2:896065/150‑1 (MQ=255)
                                                                cGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGc                                                                                       >  1:4012022/1‑150 (MQ=255)
                                                                  aCTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCtt                                                                                     <  2:2745814/150‑1 (MQ=255)
                                                                    tGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTcc                                                                                   <  2:2045448/150‑1 (MQ=255)
                                                                    tGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTcc                                                                                   >  1:2641979/1‑150 (MQ=255)
                                                                    tGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTcc                                                                                   >  2:5009318/1‑150 (MQ=255)
                                                                        gcgcgcCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTc                                                                               >  2:7425487/1‑150 (MQ=255)
                                                                        gcgcgcCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTc                                                                               >  2:1868365/1‑150 (MQ=255)
                                                                        gcgcgcCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTc                                                                               <  1:4470004/150‑1 (MQ=255)
                                                                         cgcgcCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTcc                                                                              <  2:3889048/150‑1 (MQ=255)
                                                                             ccTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTg                                                                          >  1:2393809/1‑150 (MQ=255)
                                                                                 cACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCa                                                                      >  2:3563266/1‑150 (MQ=255)
                                                                                  aCCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCan                                                                     <  1:1890535/150‑2 (MQ=255)
                                                                                   ccGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAgg                                                                    <  1:1469709/150‑1 (MQ=255)
                                                                                   ccGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAgg                                                                    <  2:4395510/150‑1 (MQ=255)
                                                                                     gAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGgc                                                                  <  1:2837166/150‑1 (MQ=255)
                                                                                             cAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCcccac                                                          >  2:3441101/1‑150 (MQ=255)
                                                                                              aGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCcccacc                                                         >  1:330473/1‑150 (MQ=255)
                                                                                              aGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCcccacc                                                         >  2:7096889/1‑150 (MQ=255)
                                                                                                tCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCcccaccca                                                       >  2:1666605/1‑150 (MQ=255)
                                                                                                tCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCcccaccca                                                       >  2:5438406/1‑150 (MQ=255)
                                                                                                  gggTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAgg                                                     >  1:100184/1‑150 (MQ=255)
                                                                                                  gggTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAgg                                                     >  2:6479653/1‑150 (MQ=255)
                                                                                                  gggTAGAATGCGGCATAGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAgg                                                     >  1:4266268/1‑150 (MQ=255)
                                                                                                                aTGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTgg                                       <  2:5970034/150‑1 (MQ=255)
                                                                                                                aTGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTgg                                       >  2:142298/1‑150 (MQ=255)
                                                                                                                aTGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTgg                                       >  2:137775/1‑150 (MQ=255)
                                                                                                                aTGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTgg                                       <  1:7425487/150‑1 (MQ=255)
                                                                                                                 tGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTggg                                      <  2:6128817/150‑1 (MQ=255)
                                                                                                                 tGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTggg                                      <  1:5586740/150‑1 (MQ=255)
                                                                                                                    cccTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTGGGGcc                                   >  1:4917234/1‑150 (MQ=255)
                                                                                                                      cTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTGGGGCCCg                                 >  2:5257628/1‑150 (MQ=255)
                                                                                                                      cTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTGGGGCCCg                                 <  1:6117457/150‑1 (MQ=255)
                                                                                                                      cTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCATGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTGGGGCCCg                                 >  2:1070505/1‑150 (MQ=255)
                                                                                                                         gACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTGGGGCCCGGTc                              <  2:5333157/150‑1 (MQ=255)
                                                                                                                         gACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTGGGGCCCGGTc                              <  2:4543664/150‑1 (MQ=255)
                                                                                                                            ccccAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTGGGGCCCGGTCggg                           >  2:4434360/1‑150 (MQ=255)
                                                                                                                             cccAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTGGGGCCCGGTCGGgc                          >  2:3999950/1‑150 (MQ=255)
                                                                                                                              ccAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTGGGGCCCGGTCGGgcg                         >  2:4199937/1‑150 (MQ=255)
                                                                                                                              ccAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTGGGGCCCGGTCGGgcg                         >  2:3698303/1‑150 (MQ=255)
                                                                                                                              ccAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTGGGGCCCGGTCGGgcg                         >  1:6036669/1‑150 (MQ=255)
                                                                                                                              ccAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTGGGGCCCGGTCGGgcg                         >  2:287757/1‑150 (MQ=255)
                                                                                                                              ccAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTGGGGCCCGGTCGGgcg                         >  1:1853693/1‑150 (MQ=255)
                                                                                                                              ccAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTGGGGCCCGGTCGGgcg                         >  2:627960/1‑150 (MQ=255)
                                                                                                                               cAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTGGGGCCCGGTCGGgcgc                        >  1:323502/1‑150 (MQ=255)
                                                                                                                               cAAACCCTCTACCAGCAACCCCTGCGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTGGGGCCCGGTCGGgcgc                        <  1:475535/150‑1 (MQ=255)
                                                                                                                                 aaCCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTGGGGCCCGGTCGGGCGCgg                      <  2:7199703/150‑1 (MQ=255)
                                                                                                                                    ccTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTGGGGCCCGGTCGGGCGCGGCaa                   <  1:3792373/150‑1 (MQ=255)
                                                                                                                                      tctACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTGGGGCCCGGTCGGGCGCGGCAAGa                 >  2:299961/1‑150 (MQ=255)
                                                                                                                                      tctACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTGGGGCCCGGTCGGGCGCGGCAAGa                 >  2:2120263/1‑150 (MQ=255)
                                                                                                                                           cAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTGGGGCCCGGTCGGGCGCGGCAAGACCTgg            <  1:4434360/150‑1 (MQ=255)
                                                                                                                                           cAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTGGGGCCCGGTCGGGCGCGGCAAGACCTgg            >  2:1177560/1‑150 (MQ=255)
                                                                                                                                           cAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTGGGGCCCGGTCGGGCGCGGCAAGACCTgg            >  1:2037581/1‑150 (MQ=255)
                                                                                                                                            aGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCGGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTGGGGCCCGGTCGGGCGCGGCAAGACCTGGc           <  2:6862256/150‑1 (MQ=255)
                                                                                                                                             cgtaGCCCCGAGTGCTCAGCGCTACGATGCTCACCCGGCCCAGGCCCTCGACGACGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCACTGGGGCCCGGTCGGGCGCGGCACGACCTGGCt          >  2:4778658/4‑150 (MQ=255)
                                                                                                                                                aGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTGGGGCCCGGTCGGGCGCGGCAAGACCTGGCTGAt       <  1:6942953/150‑1 (MQ=255)
                                                                                                                                                 gCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTGGGGCCCGGTCGGGCGCGGCAAGACCTGGCTGATg      <  2:770980/150‑1 (MQ=255)
                                                                                                                                                   ccTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTGGGGCCCGGTCGGGCGCGGCAAGACCTGGCTGATGGa    <  1:3706545/150‑1 (MQ=255)
                                                                                                                                                    cTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTGGGGCCCGGTCGGGCGCGGCAAGACCTGGCTGATGGAc   >  2:2656442/1‑150 (MQ=255)
                                                                                                                                                    cTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTGGGGCCCGGTCGGGCGCGGCAAGACCTGGCTGATGGAc   <  1:5285812/150‑1 (MQ=255)
                                                                                                                                                    cTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTGGGGCCCGGTCGGGCGCGGCAAGACCTGGCTGATGGAc   <  2:7151126/150‑1 (MQ=255)
                                                                                                                                                    cTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTGGGGCCCGGTCGGGCGCGGCAAGACCTGGCTGATGGAc   <  1:2200360/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTTGAGCAGGGCCGCCCCACCCAGGGCCTCTACCTCTGGGGCCCGGTCGGGCGCGGCAAGACCTGGCTGATGGACC  >  NC_002947/2510281‑2510579

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑