| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,534,020 | G→C | 6.7% | intergenic (+155/‑252) | PP_2217 → / → PP_2218 | enoyl‑CoA hydratase/transposase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,534,020 | 0 | G | C | 6.7% | 788.9 / 41.0 | 267 | intergenic (+155/‑252) | PP_2217/PP_2218 | enoyl‑CoA hydratase/transposase |
| Reads supporting (aligned to +/- strand): ref base G (137/112); new base C (10/8); total (147/120) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01 | |||||||||||
Only 100 of 288 total aligned reads displayed.
CTCGGTTCGTTGCCGTTGCCGTTGCCGTGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCT > NC_002947/2533871‑2534169 | cTCGGTTCGTTGCCGTTGCCGTTGCCGTGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCatg < 2:6559290/150‑1 (MQ=255)cTCGGTTCGTTGCCGTTGCCGTTGCCGTGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCatg < 1:2621961/150‑1 (MQ=255) tCGGTTCGTTGCCGTTGCCGTTGCCGTGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCatgg > 1:612847/1‑150 (MQ=255) tCGGTTCGTTGCCGTTGCCGTTGCCGTGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCatgg < 1:806340/150‑1 (MQ=255) tCGGTTCGTTGCCGTTGCCGTTGCCATGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCatgg > 1:6393639/1‑150 (MQ=255) cGGTTCGTTGCCGTTGCCGTTGCCGTGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCatgga < 2:1775875/150‑1 (MQ=255) ggTTCGTTGCCGTTGCCGTTGCCGTGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCatggat < 1:170087/150‑1 (MQ=255) tCGTTGCCGTTGCCGTTGCCGTGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATggg < 2:5657534/150‑1 (MQ=255) tCGTTGCCGTTGCCGTTGCCGTGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATggg < 2:6592383/150‑1 (MQ=255) tCGTTGCCGTTGCCGTTGCCGTGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATggg < 1:3240939/150‑1 (MQ=255) cgttgccgttgccgttgcCGTGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATgggg < 2:4382869/150‑1 (MQ=255) cgttgccgttgccgttgcCGTGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATgggg < 1:1877247/150‑1 (MQ=255) gttgccgttgccgttgccGTGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGc > 1:4253946/1‑150 (MQ=255) ccgttgccgttgccgtGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGc < 1:3032001/150‑1 (MQ=255) gttgccgttgccgtGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAg > 1:1089600/1‑150 (MQ=255) ttgccgttgccgtGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAgc < 1:6177508/150‑1 (MQ=255) gccgttgccgtGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAgcgc < 2:1247280/150‑1 (MQ=255) gttgccgtGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTa < 1:1409343/150‑1 (MQ=255) ccgtGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGCAGGCCCCATCCATGGGGCCT‑CAgcgcttgacgg < 2:3883930/150‑8 (MQ=14) cgtGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCCTGGATGGGGCCTGCAGCGCGTACTccc > 1:5919482/1‑150 (MQ=255) cgtGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTccc < 2:6219246/150‑1 (MQ=40) cgtGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTccc < 1:3772446/150‑1 (MQ=40) cgtGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTccc > 2:7088359/1‑150 (MQ=40) gtGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCg > 2:2899307/1‑150 (MQ=39) tGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCgg < 2:5393608/150‑1 (MQ=38) cTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATCCATGGGGCCtc > 1:2721646/1‑130 (MQ=255) cTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATCCATGGGGCCtc < 2:2721646/131‑2 (MQ=255) ttttGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAgc > 1:6475962/1‑134 (MQ=37) ttttGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGc > 2:5859314/1‑150 (MQ=35) ttCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCt < 1:7057839/123‑1 (MQ=35) ttCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGAcc > 2:2246989/1‑150 (MQ=37) tCTACGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCACGCGCTG‑AGGCCCCAGGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCg > 2:5927155/1‑150 (MQ=255) tAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑a < 2:3330702/139‑1 (MQ=34) cgcgATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAgg < 1:6745251/150‑1 (MQ=37) cgATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGa > 2:455380/1‑150 (MQ=37) aGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAAccc < 2:379812/150‑1 (MQ=37) cGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAgc > 1:3994846/1‑150 (MQ=37) aGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCa > 1:3650374/1‑150 (MQ=37) tttGCTACTCCAGGAGGCCGAGCGTAGGGCTTGCGGTGGGTGGTGACGGGCATGGAGGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGAAAGACCGTAGCGCGGGAACCCCGGAGCGTAGCGCAgg < 1:4631295/149‑1 (MQ=11) cGACTGCTGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCACGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGcc < 2:4156266/150‑1 (MQ=255) gACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCg > 2:3455916/1‑150 (MQ=37) aCTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCgg > 1:2910787/1‑150 (MQ=37) ggCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGa < 2:4809928/150‑1 (MQ=37) ggCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGAGGCCCGTCAAGCGCTG‑AGGCCCCATGGCTGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGa < 2:4215770/150‑1 (MQ=255) ccGAGCGTAGGGCTTGCGGCGGGAGGTGCCGGGCATGGATGCCCGTCACGCGCTG‑CGGCCCCAGGGAGGGGGCCTGCAGCGCGTACTCCCGGG‑AGCACGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGc < 2:338287/150‑1 (MQ=11) aGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGttt > 1:3356678/1‑150 (MQ=34) gCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGtttttt > 2:3197186/1‑150 (MQ=34) gCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGtttttt < 2:1975613/150‑1 (MQ=34) gttGGGGGGGGTGTTGAGGGGCATGGTGGCCCGTCAGGCGCTG‑AGGCCCCAGGGTTGGGGCCTGCCGCGCGTCCGCCGGGG‑TGAAAGACGGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTg < 1:4070321/149‑1 (MQ=11) gttGCGGTGGGTGGTTACGGGCTTGGATGCCCGTCATGCGCTG‑CGGCCCCATGGATGGGGCCTGCTGCGGGTACTCGCGGT‑TGCAAGACGGTAGCGCGGGAACCCCGGAGCGTAGCGCTGGGGCCGGATGATGGGAGCCAGCGttttttt < 2:261188/149‑2 (MQ=11) agggagggGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACtt < 2:7031706/150‑1 (MQ=17) aggTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTg > 1:4456099/1‑150 (MQ=32) ttGACGGGCATCCATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACttttt < 2:4608070/146‑1 (MQ=17) ttGACGGGCATCCATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTc > 2:2983801/2‑150 (MQ=17) tGACGGGCATCCATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTcg > 2:3493728/1‑150 (MQ=17) gACGGGCATCCATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTcgc > 2:6160888/1‑150 (MQ=17) aCGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTcgcg > 2:6876803/1‑150 (MQ=32) cGGGCATGGTGCCCCGACACGCGCTG‑CGGCCCCTTGGATGGGGCCTGCAGGGCTTACGCCGGGG‑AGAAAGACGGTCGCGCGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTcaaac < 1:2123706/150‑5 (MQ=11) gggCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGtt > 1:1511044/1‑150 (MQ=32) ggCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGttt < 2:1478406/150‑1 (MQ=32) aTGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGAc > 2:6669233/1‑150 (MQ=32) ggATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACaa > 2:5104679/1‑150 (MQ=32) gATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACaaa > 2:2550967/1‑150 (MQ=32) aTGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACaaaa < 2:1649693/150‑1 (MQ=32) tGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACaaaaa < 1:1159295/150‑1 (MQ=32) tGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACaaaaa < 2:6393639/150‑1 (MQ=32) tGCCCGTAAAGCGCTG‑TGGCCCCATGGTTGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCTTAGCGTGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACaaaaa < 1:545301/150‑1 (MQ=11) gCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAg > 2:3985249/1‑150 (MQ=32) cccGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCCGAGCGTAGCGCCGGGGCCGGATGATGGGAGCCAGCGGGTTATGGTTACTTTTTGTCGCGGGGGACACAAAGt > 2:5137524/1‑150 (MQ=11) ccGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGatgatg > 2:1434012/1‑103 (MQ=11) ccGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGatgatg < 1:1434014/103‑1 (MQ=11) ccGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTg > 2:5496953/1‑150 (MQ=32) cgacatgcgcTG‑TGGCCCCTTGGTTGGGGCCTGCAG‑GGGTTCCCCCGGGTAGCAAGACGGTCGCGCGGGAACCCCGGCGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGa < 1:1998829/144‑1 (MQ=11) cGTCATGCGGTG‑AGGCCCCTTGGTTGGGGCCTGCAGCGCGTACTCCGGGG‑AGCACGACCGTAGGGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGa < 1:2210519/150‑1 (MQ=11) cGTCACGCGCTG‑AGCCCCCTTGGTTGGGCCCTGCCGCGGGTACTCCCGGG‑AGAAAGACCGTAGCGCGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGa < 1:4414553/150‑1 (MQ=11) cGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGa < 2:4104986/150‑1 (MQ=32) cGTCAAGCGCGG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCCAGACCGTAGCGCGGGACCCCCGGAGCGTCGCGCCGGGGCCGGATGATGGGCGCCAGCGTTTTTTGGTTACTGGTGGTCGCGTGTGACACAAAGTGa > 2:7319220/1‑150 (MQ=11) gTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGAc > 2:7257176/1‑150 (MQ=32) gTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGAc > 1:456509/1‑150 (MQ=32) gTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGAc > 1:5563784/1‑150 (MQ=32) gTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGAc > 1:5962054/1‑150 (MQ=32) cacgcgcTG‑CGGCCCCTTGGAGGGGGCCGGCCGCGCGTCCGCCGGGG‑AGCACGCCCGTCGCGCGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGAccc < 1:4372380/147‑1 (MQ=11) aaGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACccg > 2:4654815/1‑150 (MQ=32) gcgcTG‑AGGCCCCCTGGCGGGGGCCTGCAGCGCGTACTCCGGGG‑AGCAAGACCTTCGCGCGGGAACCCCGGTGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACccgcc < 1:5146939/150‑1 (MQ=11) gcgcTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTCCTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACccgcc < 2:2856021/150‑1 (MQ=17) gcTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGt > 1:2749276/1‑150 (MQ=32) tgcaGGCCCCATCCATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGtttttt > 1:6245084/4‑109 (MQ=255) gcaGGCCCCATCCATGGGGCCT‑CAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTacg > 1:2074147/3‑148 (MQ=11) ggCCCCGTGGTGGGGGCCTGCAGCGCGTACCCCGGGG‑AGCAAGACCGTCGCGCGGGAACCCCGGAGCGTAGCGCTGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAggg < 1:1359753/150‑1 (MQ=11) gCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGc > 1:759901/1‑150 (MQ=32) ccccATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGcc < 1:4804975/150‑1 (MQ=32) cccATGGCTGGGGCCTGCAGCGGGTACTCCGGGG‑ACCATGACCGTAGCGCGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCa < 1:3945621/150‑1 (MQ=11) cccATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCa > 2:6995111/1‑150 (MQ=33) ccATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCATGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCAt > 2:1189458/1‑150 (MQ=21) ccATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCAt > 1:6913469/1‑150 (MQ=34) ccATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCAt > 1:5083052/1‑150 (MQ=34) ccATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCAt > 1:2534325/1‑150 (MQ=34) ccATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCAt > 2:4414935/1‑150 (MQ=34) cATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACccgc > 1:5681588/1‑137 (MQ=32) tggatggGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATccc > 1:523504/1‑150 (MQ=37) | CTCGGTTCGTTGCCGTTGCCGTTGCCGTGGCTTTTGCTTCTAAGTGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGG‑AGCAAGACCGTAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCT > NC_002947/2533871‑2534169 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |