| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,761,829 | A→T | 5.3% | intergenic (+16/+17) | czcA‑II → / ← PP_2411 | cation efflux system protein/MFS transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,761,829 | 0 | A | T | 5.3% | 885.3 / 25.2 | 277 | intergenic (+16/+17) | czcA‑II/PP_2411 | cation efflux system protein/MFS transporter |
| Reads supporting (aligned to +/- strand): ref base A (160/101); new base T (6/9); total (166/111) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.12e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.15e-01 | |||||||||||
Only 100 of 282 total aligned reads displayed.
CCGGGGCAGAGGTGCAGCGGCCACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCACCACCAGGTAGAACGCC > NC_002947/2761680‑2761978 | cgggGCAGAGGTGCAGCGGCCACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAg > 1:1665387/1‑150 (MQ=255) cAGAGGTGCAGCGGCCACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGc < 1:5086949/150‑1 (MQ=255) gagGTGCAGCGGCCACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGccc < 1:3336932/150‑1 (MQ=255) agGTGCAGCGGCCACTGGCGCCGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGcccc < 1:1017880/150‑1 (MQ=255) agGTGCAGCGGCCACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCCTTGCAGcccc < 1:3011872/150‑1 (MQ=255) tGCAGCGGCCACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCCTTGCAGCCCcaaa < 2:7382/150‑2 (MQ=255) gCAGCGGCCACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCcaaca > 1:4553379/1‑150 (MQ=255) ggCCACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTc < 2:3737232/150‑1 (MQ=255) ggCCACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTc > 1:2584980/1‑150 (MQ=255) cACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGCTGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCaaa > 1:6083827/1‑150 (MQ=255) cACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCaaa > 1:4314079/1‑150 (MQ=255) aCTGGCGACGGTGGTGATTGGCGTAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAAc < 2:6259758/150‑1 (MQ=255) aCTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAAc > 1:985641/1‑150 (MQ=255) cTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGATGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACg > 2:1103587/1‑150 (MQ=255) gCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGcc > 1:2770066/1‑150 (MQ=255) gCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGcc > 1:5176107/1‑150 (MQ=255) gCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGcc > 1:3262444/1‑150 (MQ=255) gCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGcc > 1:1978002/1‑150 (MQ=255) gtggtgATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCgg < 1:2347426/150‑1 (MQ=255) gggtgTTTGGCGGAATCTTGTCTTCTACCGCGCTGAGGTGGCTGGTGTTGCCGGGTTTTTATCTGTGGGCTTATGGGGGGGATGAGCAGCTGGAAGGCTGTGATTTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCggg < 1:7075141/149‑1 (MQ=255) gtgATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCa > 2:105697/1‑150 (MQ=255) gATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCGGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCAcc > 2:1368627/1‑150 (MQ=255) ttGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAGGGCTGAGCATTTGGGGCTGCAAGGCAGCCCcaac < 2:155951/123‑1 (MQ=255) aaTCTTGTCTTCTACCGCGCTGACGTTGCTGGTGGTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCGGCCCGcac < 2:6947299/150‑1 (MQ=255) tCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCacac > 1:2061223/1‑150 (MQ=255) ttGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCg > 1:3614702/1‑150 (MQ=255) tGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGt > 2:581845/1‑150 (MQ=255) tGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGt > 2:7281552/1‑150 (MQ=255) gTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTc < 2:2862193/150‑1 (MQ=255) gTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTc < 1:4768211/150‑1 (MQ=255) gTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTc < 2:195292/150‑1 (MQ=255) gTCTTCTACCGCGCGGACGTGGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACACCCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCgcc < 1:1460876/150‑3 (MQ=255) ttctACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCCGCCCGCACACCGTCcac > 2:5887562/1‑150 (MQ=255) ttctACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCcac > 1:614010/1‑150 (MQ=255) tctACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTc < 2:6658542/146‑1 (MQ=255) tACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACAcc > 1:732722/1‑150 (MQ=255) ccGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCa > 1:2924841/1‑150 (MQ=255) ccGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTAGCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCa < 2:5129904/150‑1 (MQ=255) cgcgCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAg > 2:845745/1‑150 (MQ=255) cgcTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCTGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGgt > 1:1053545/1‑150 (MQ=255) cgcTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGgt < 2:2217412/150‑1 (MQ=255) cTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCcaa < 2:4045617/96‑1 (MQ=255) cTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCcaa > 1:4045617/1‑96 (MQ=255) tGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGgtcgt > 2:3083304/1‑150 (MQ=255) gACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGgtcgtc > 2:6143425/1‑150 (MQ=255) ccGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCa < 1:4880871/149‑1 (MQ=255) aCGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCa < 2:1395394/150‑1 (MQ=255) aCGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCa < 2:2016183/150‑1 (MQ=255) tGCGGGTGTGGCCGGCGTTGTATCTGTGGGCGTCTCGGCGGGATTAGCAGCAGGATGGCTGCGAATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCa < 1:5809824/150‑1 (MQ=255) tGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAg > 2:6442445/1‑150 (MQ=255) tGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAg > 1:5551831/1‑150 (MQ=255) tgtTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGaaa > 1:2715644/1‑150 (MQ=255) ccGGCTTTGTATCCGTGGGCGTATGGGGGGTCTGAGCAGCAGGACGGCTTTGCTTTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCcgc < 1:1238172/150‑1 (MQ=255) ccGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCcgc < 2:4492606/150‑1 (MQ=255) ggCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGa < 2:4677431/150‑1 (MQ=255) ggCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGa > 2:7084397/1‑150 (MQ=255) gTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAg > 1:6901549/1‑123 (MQ=255) aTCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCg > 2:4310970/1‑150 (MQ=255) tCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCgg < 2:4538846/150‑1 (MQ=255) gTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCaa < 1:3478893/150‑1 (MQ=255) gTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCaa < 2:2402483/150‑1 (MQ=255) gTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCaa > 1:6325808/1‑150 (MQ=255) gTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCaa < 1:4254269/150‑1 (MQ=255) tGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAAc > 2:226040/1‑150 (MQ=255) gCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGcc > 2:1798685/1‑150 (MQ=255) cGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCa > 1:624845/1‑150 (MQ=255) tATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAAc < 2:3787133/150‑1 (MQ=255) tCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAAccc > 1:4814926/1‑150 (MQ=255) ggcggGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGc < 2:3272923/150‑1 (MQ=255) gcggGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCg > 2:4776347/1‑72 (MQ=255) gggATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCcca < 2:4842108/150‑1 (MQ=255) gggATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCcca < 2:4502976/150‑1 (MQ=255) gggATGAGCAGCAGGAAGGCTGAGCATATGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCcca > 2:6745058/1‑150 (MQ=255) agcagcAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACATCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACACAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACg > 1:5931050/1‑150 (MQ=255) gcagctGGAAGGCTGAGCATTGGGGGCTGCACGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGc < 1:5675387/150‑1 (MQ=255) gcagGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGccac < 1:5327230/150‑1 (MQ=255) cagGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGccacc > 1:6994275/1‑150 (MQ=255) cagGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGccacc > 1:6994308/1‑150 (MQ=255) agGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGccacca > 2:2621131/1‑150 (MQ=255) agGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGccacca > 2:7187129/1‑150 (MQ=255) ggAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAg > 2:5037155/1‑150 (MQ=255) gAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCCAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAgc > 2:5617354/1‑150 (MQ=255) gAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAgc < 1:7166611/150‑1 (MQ=255) aaGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAgcg < 2:4009576/150‑1 (MQ=255) ggCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCa > 1:1373723/1‑150 (MQ=255) cTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAAt > 1:1832371/1‑150 (MQ=255) tGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATc > 1:4938718/1‑150 (MQ=255) tGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATc > 1:4682562/1‑150 (MQ=255) tttGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCaccacc > 1:6692270/1‑150 (MQ=255) tttGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCaccacc > 2:3221249/1‑150 (MQ=255) tttGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCaccacc < 2:1574905/150‑1 (MQ=255) gttGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAAAACGCGACGATTACGGCAACCCCAACCCGCCCCCCAACCCCACCAGCGCAATCaccacc > 2:2684591/2‑150 (MQ=255) ttGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCAccacca < 1:2816083/150‑1 (MQ=255) gggCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCACCACCAGGt > 2:3947414/1‑150 (MQ=255) tGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCACCACCAGGTAGaa > 2:4971480/1‑150 (MQ=255) tGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCACCACCAGGTAGaa > 1:4828817/1‑150 (MQ=255) tGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCACCACCAGGTAGaa > 2:3905734/1‑150 (MQ=255) tGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCACCACCAGGTAGaa > 2:3320803/1‑150 (MQ=255) gCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCACCACCAGGTAGAAc > 1:3999790/1‑150 (MQ=255) cAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCACCACCAGGTAGAACg > 1:866868/1‑150 (MQ=255) | CCGGGGCAGAGGTGCAGCGGCCACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCACCACCAGGTAGAACGCC > NC_002947/2761680‑2761978 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |