| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 220,562 | C→G | 7.1% | intergenic (+19/‑109) | PP_0168 → / → PP_5431 | putative surface adhesion protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 220,562 | 0 | C | G | 7.1% | 685.6 / 33.3 | 210 | intergenic (+19/‑109) | PP_0168/PP_5431 | putative surface adhesion protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (125/69); new base G (5/10); total (130/80) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.50e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.20e-01 | |||||||||||
Only 100 of 217 total aligned reads displayed.
ACGCCGAAGGTGGTATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTACGTGCAACGCAACG > NC_002947/220413‑220710 | aCGCCGAAGGTGGTATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGcac > 2:6171383/1‑150 (MQ=255) cGCCGAAGGTGGTATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGcaca < 2:6868930/150‑1 (MQ=255) gCCGAAGGTGGTATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAg < 1:1100707/150‑1 (MQ=255) cGAAGGTGGTATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCg < 2:2649908/150‑1 (MQ=255) ggtggtATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCTGTGCGGccc < 2:4779097/150‑1 (MQ=255) tggtATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCTGTGCGGCCCCg < 2:2817071/150‑1 (MQ=255) tggtATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCg < 2:6205616/150‑1 (MQ=255) ggtATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCTGTGCGGCCCCgg < 1:3658232/150‑1 (MQ=255) ggtATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCTGTGCGGCCCCgg < 2:129872/150‑1 (MQ=255) ggtATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCgg > 1:4786822/1‑150 (MQ=255) gtATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGc > 2:6880997/1‑150 (MQ=255) tATCGCCACCGCCGACGTGACCAGCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGCTCACCTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACCACCAGGACAGCTGACAGACCACCGGGGCCGCTGTGCGGCCCCggtg < 1:5892175/150‑3 (MQ=255) aTCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGctc > 2:1533325/1‑150 (MQ=255) tCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGctct > 2:6472761/1‑150 (MQ=255) caccGCCGACGGGACCATCATGCTGTATGGGGTAAAGTGTTATAACCTTAGTATAAACTGTTTGATCTGCGGCGCCGATCCGACCATCATCATCAACAACACGCACAGCTGACCGACCCCGGGGGCCGCACGGCGGCCCCGGCTCTTTcc < 2:4742068/147‑1 (MQ=255) aaCGCCGACTTGAACATAAAGGTGTAAGGCTTCAACTGGTATAACCAGACTATCAACTCTTTTATCAGCGGCGCCGATCCGACCATAATCATCCACAACAAGGACAGCTGACCGCCCACGGGGGCCGCACAGCGGCCCCGGCTCTTTCCt < 2:7170456/150‑1 (MQ=255) aCCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCaa > 2:562905/1‑150 (MQ=255) aaaaGATGTAAGGCCTAAACTGGTATAACAACACCAAAAACTTTATTATCAGCGGCGCCCATCCCAAAAAAAAAAACCAAAAAAAGCACACCTCAAACACCACCGGGCCCCAACAGCGCCCCCGGCTCTTTCCTGCTACCCGCCAACAgc < 2:2033758/148‑1 (MQ=255) aaGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAgcgc > 1:5681587/1‑150 (MQ=255) aaGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAgcgc > 2:5398343/1‑150 (MQ=255) tGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATAc > 1:7274691/1‑150 (MQ=255) gTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGgcgc > 1:4922662/1‑150 (MQ=255) gTCTAACACCACTATCAACTCGTTGACCCGCGGCGCCTATCCGACCAACATCACCCACACCAAGCACCGCTGACAGCCCACGGGGGCCGCACCGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTg < 1:6746635/150‑1 (MQ=255) tCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCTTCATAATCCACAACAAGGACTGCTGACAGACCACCGGGGCCGCACTGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTgc < 2:1214027/150‑1 (MQ=255) tCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTgc > 2:1883283/1‑150 (MQ=255) cTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTgcg > 1:358600/1‑150 (MQ=255) aCCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTgcgcgc > 2:3878867/1‑150 (MQ=255) aCCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCGgcgcgc > 2:6995476/1‑150 (MQ=255) cAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGccc > 1:6046440/1‑150 (MQ=255) aGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCgg > 2:2594275/1‑95 (MQ=255) aGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCgg < 1:2594275/95‑1 (MQ=255) aGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCg > 1:154734/1‑150 (MQ=255) aGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCg > 2:7026587/1‑150 (MQ=255) gACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCgg > 2:6346021/1‑150 (MQ=255) ctgATCAACGAGTTGATCAGCGGCGCCGATCCGACCCTCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACCGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGc > 2:3652003/3‑150 (MQ=255) gATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGa > 1:5762190/1‑150 (MQ=255) aaCTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCGGCGCGCCCGGCGATCtt > 1:3449679/1‑150 (MQ=255) atggtcggATCGGCGCCGCTGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCttt > 2:2955284/8‑150 (MQ=255) aCTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCttt > 2:6588543/1‑150 (MQ=255) aCTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCAGCGCGCCCGGCGCACttt > 1:4665427/1‑150 (MQ=255) cTCGTTGATCAGCGGCGCCGATCCTCCCATCATACTCCACAACAAGCACCGCTGACCGCCCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTg < 2:4805600/150‑1 (MQ=255) cttttaTCAGCGGCGCCGAACCCACAAAAATAATCCACAACAACCACAGCTGACACACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGcc < 1:6181876/145‑1 (MQ=255) gTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCt > 2:6341185/1‑150 (MQ=255) gTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCt > 2:7145182/1‑150 (MQ=255) tCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTAtgct > 1:6095458/1‑150 (MQ=255) tCAGCGGCGCCGATCCGACCATCATAATCCACACCATGGACAGCTGACAGACCACCGGGGCCGCACCGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTAtgct < 1:4235350/150‑1 (MQ=255) ggggcgCCGCCCCGCCCACCATCAACCACAACCCGCCCCGCTGACACCCCCCGGGGGCCCCCCCGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATgctgct < 1:6472761/148‑1 (MQ=255) ggggcgCCGACCCGACCACCATCACCCCCAACCCGGACCGCGGACAGCCCCCCGGGGCCGCACCGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATgctgct < 2:1309773/148‑1 (MQ=255) gATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTATACca > 1:1380172/1‑150 (MQ=255) aTCCCACCATCATAATCCACAACACGGACCGCTGACCCACCCCGGGGGCCGCACCGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGTGCCCGGCGATCTTTGCCTATGCTGCTGTCTACcaa < 1:2202285/150‑1 (MQ=255) ctccaatcaccatcCCCACCAAGGCCAGCTGACCCACCCCGGGGGCCGCACCGGGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACcaacaa < 2:4693055/145‑1 (MQ=255) cGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACCGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACcaacaa < 1:1803496/150‑1 (MQ=255) cGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCGTTGCCTATGCTGCTGTCTACccacaa > 1:279043/1‑150 (MQ=255) cGACAATCATCATCCACAACAAGGACAGCTGACAGCCCACGGGGGCCGCACCGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACcaacaa < 1:6804316/150‑1 (MQ=255) gACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAg > 2:4322908/1‑150 (MQ=255) gACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAg > 2:3992019/1‑150 (MQ=255) gACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCGGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAg > 1:2100353/1‑150 (MQ=255) caCCATCATAATCAACAACAAGTACCGCTTACACACCCCGGGGGCCGCACTGGGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAg < 1:3961257/149‑1 (MQ=255) caCCATAATCATCAACAACAAGCACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAg < 1:5533550/149‑1 (MQ=255) aCCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGCTCTTTTCCTATTCTGCTGTCTACCAACAAgg > 1:7064847/1‑150 (MQ=255) ccATCATCATCCACAACACGCACAGCTGACAGACCACCGGGGCCGCACCGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGa < 2:2228408/150‑1 (MQ=255) catcatcatCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGaa > 2:1628883/1‑150 (MQ=255) catcatcatCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGaa < 2:5380688/150‑1 (MQ=255) atcatcCACAACATGCACAGCTTACACACCCCGGGGGCCGCACCGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAaacaa < 1:1163206/150‑1 (MQ=255) atcatcCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAaacaa > 1:2978413/1‑150 (MQ=255) ataatcCACAACACGGACCGCTGACAGACCACGGGGGCCGCACGGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAaacaa < 1:2896574/147‑1 (MQ=255) tcCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTg > 1:4715119/1‑150 (MQ=255) tcCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCGGCGCGCCCGGCGATCTTTTCCTATGCTGCTGTCTACCAACAAGGAAAAAACGTg > 1:926492/1‑150 (MQ=255) ccACAACACGGACAGCTGACAGACCACCGGGGCCGCACTGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGTGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGa < 2:1631964/150‑1 (MQ=255) acaacaAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACg > 2:4929908/1‑150 (MQ=255) caacaaGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCGGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGa > 1:6273911/1‑150 (MQ=255) acaaGGACCGCTCACACACCCCCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAgg < 2:5223027/150‑1 (MQ=255) gACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACAt > 1:7337402/1‑150 (MQ=255) gACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACAt > 1:2909997/1‑150 (MQ=255) gACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACAt > 2:7426057/1‑150 (MQ=255) aCAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATc > 2:2124727/1‑150 (MQ=255) aCAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATc > 1:2314052/1‑150 (MQ=255) aGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGc > 2:2373019/1‑150 (MQ=255) gCTTACAGACCACGGTGGCCGAAATGGGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGAATACTCTGGCGCCGTGCCTGCGCGCCCGTCGATCTTTGCCTATGCTGCTTTCTACCAACAAGGAAACAACGTGACGATGGACATCTcc < 2:5168594/150‑1 (MQ=255) cTGCCAGACCACCGGGGCCGCACCGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCa < 2:7203466/150‑1 (MQ=255) gaccgcccaccGGGCCCGCACCGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATg < 1:4623108/144‑1 (MQ=255) ccgACCCCCGGGGCCGCACCGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGtt < 2:5129324/148‑1 (MQ=255) aGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTc > 2:123585/1‑150 (MQ=255) gACCCCGGGGGCCGCACCGCGCCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCt < 1:3918195/150‑1 (MQ=255) ccccgggggCCGCACCGCGCCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTAc < 1:1326383/145‑1 (MQ=255) cccccGGGGCCGCCCCGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTAc < 1:6553795/147‑1 (MQ=255) cccccGGGCCCCCACAGCCCCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTAc < 1:1827752/147‑1 (MQ=255) ccaccGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTAc < 1:1709262/150‑1 (MQ=255) caccGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTACg > 1:545860/1‑150 (MQ=255) caccGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTACg > 1:3053977/1‑150 (MQ=255) accGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTACGt > 2:4236417/1‑150 (MQ=255) ccGGGGCCGCTGTGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTACGTg > 2:5469627/1‑150 (MQ=255) ccGGGGCCGCTGTGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCCGGCCAGCGCGCCCGGCGATCTTTGCCTATTCGGCTGTCTACCAACAAAGAAACAACCTGACGAGGGACATAGCCATGTTCTAAGTg > 1:4447777/1‑150 (MQ=255) ccGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTACGTg > 2:7433106/1‑150 (MQ=255) gcccccacaCCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCGTACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAACCAAACAACCTGACGAGGGACATCGCCATGTTCTACGTgcaac < 2:4498787/145‑1 (MQ=255) gCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCGGTCTACCAACAAGGAAACAACGTGACGAGGGACAACGCCCTGTTCTACGTgcaacg > 1:2019269/1‑150 (MQ=255) gCACCGGGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTACGTgcaacgcaa < 2:5000596/150‑1 (MQ=255) gCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTACGTgcaacgcaa > 2:7305476/1‑150 (MQ=255) ccaccGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTACGTgcaacgcaa < 1:635810/149‑1 (MQ=255) acaGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTACGTGcaacgcaacg > 1:7184180/1‑150 (MQ=255) | ACGCCGAAGGTGGTATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTACGTGCAACGCAACG > NC_002947/220413‑220710 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |