| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 226,659 | T→C | 6.2% | intergenic (+66/‑67) | PP_0174 → / → PP_0175 | hypothetical protein/transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 226,659 | 0 | T | C | 6.2% | 1003.7 / 33.5 | 308 | intergenic (+66/‑67) | PP_0174/PP_0175 | hypothetical protein/transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (169/119); new base C (8/11); total (178/130) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.30e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.85e-01 | |||||||||||
Only 100 of 314 total aligned reads displayed.
TATCAGGAGTGGCGGGACCGGGCGGTGCAGATGGGCAGCACATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGCCCGCCACTGGCGGCGCATCTGTCATACCGC > NC_002947/226510‑226808 | aTCAGGAGTGGCGGGACCGGGCGGTGCAGATGGGCAGCACATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACAAGGCTCTCCGTCGCCCCCTGTTg > 1:6904117/1‑150 (MQ=255) tCAGGAGTGGCGGGACCGGGCGGTGCAGATGGGCAGCACATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTga < 2:1907028/150‑1 (MQ=255) tGGCGGGACCGGGCGGTGCAGATGGGCAGCACATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAgg < 1:4277065/150‑1 (MQ=255) ggCGGGACCGGGCGGTGCAGATGGGCAGCACATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAggg < 2:6710392/150‑1 (MQ=255) gCGGGACCGGGCGGTGCAGATGGGCAGCACATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAgggg > 2:3460567/1‑150 (MQ=255) gCGGGACCGGGCGGTGCAGATGGGCAGCACATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAgggg > 2:2838170/1‑150 (MQ=255) cGGGACCGGGCGGTGCAGATGGGCAGCACATTGGCCTTTACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGTCTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTCGTCAACAggggg < 2:6154563/150‑1 (MQ=255) cGGGACCGGGCGGTGCAGATGGGCAGCACATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAggggg < 1:4780096/150‑1 (MQ=255) cGGGACCGGGCGGTGCAGATGGGCAGCACATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTCGTCAACAggggg < 2:6521278/150‑1 (MQ=255) gggACCGGGCGGTGCAGATGGGCAGCACATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGa > 1:3151571/1‑150 (MQ=255) gggACCGGGCGGTGCAGATGGGCAGCACATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAAACAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGa < 2:1975555/150‑1 (MQ=255) ggACCGGGCGGTGCAGATGGGCAGCACATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGAt < 1:1513467/150‑1 (MQ=255) gggCGGTGCAGATGGGCAGCACATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCgg < 2:7033845/150‑1 (MQ=255) gggCGGTGCAGATGGGCAGCACATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCgg < 2:3579199/150‑1 (MQ=255) ggCGGTGCAGATGGGCAGCACATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCggg < 1:3917547/150‑1 (MQ=255) cGGTGCAGATGGGCAGCACATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGc < 2:6039660/150‑1 (MQ=255) ggTGCAGATGGGCAGCACATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCg > 1:5139976/1‑150 (MQ=255) ggTGCAGATGGGCAGCACATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCg > 1:1713142/1‑150 (MQ=255) cAGATGGGCAGCACATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGtata < 2:4216495/150‑1 (MQ=255) cAGATGGGCAGCACATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGtata < 2:2253065/150‑1 (MQ=255) cAGATGGGCAGCACATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTCGTCAACAgggg < 1:2755879/134‑1 (MQ=255) aTGGGCAGCACATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTgacgac > 1:4616332/1‑126 (MQ=255) aTGGGCAGCACATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTg > 1:343808/1‑150 (MQ=255) ggCAGCACATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATa < 1:3289729/150‑1 (MQ=255) ggCAGCACATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATa < 2:1415766/150‑1 (MQ=255) acaTTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGc > 2:5666107/1‑150 (MQ=255) ttGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCaaa < 1:7304720/150‑1 (MQ=255) ttGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCaaa > 2:6809173/1‑150 (MQ=255) tGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAAc > 2:1269393/1‑150 (MQ=255) ggCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGt > 1:1101265/1‑122 (MQ=255) ggCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGt < 2:1101265/122‑1 (MQ=255) cTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATg < 1:6346772/150‑1 (MQ=255) ttGCCCATGAAGCTGGAAGACCAGATCCATCCCGGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGa < 2:427801/150‑1 (MQ=255) ttGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGa < 2:384605/150‑1 (MQ=255) cATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAAtata > 1:5700701/1‑150 (MQ=255) cATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAAtata > 1:6993347/1‑150 (MQ=255) aGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTgg < 1:3757400/150‑1 (MQ=255) aGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTgg < 1:6157222/150‑1 (MQ=255) gCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGt > 2:4458819/1‑150 (MQ=255) tGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGtt > 2:1927953/1‑89 (MQ=255) gAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTtctc < 2:2162931/150‑1 (MQ=255) gAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTtctc < 2:104905/150‑1 (MQ=255) gAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTtctc > 2:3665169/1‑150 (MQ=255) aGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCtt > 1:2860083/1‑150 (MQ=255) aCCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCa < 1:1891871/150‑1 (MQ=255) ccAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGa > 2:7340377/1‑130 (MQ=255) cAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATg > 1:4873120/1‑150 (MQ=255) ccatccCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCt > 1:1463521/1‑150 (MQ=255) atccCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTCGTCAACAgg > 1:1035744/1‑83 (MQ=255) tccCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCGCTTgt > 1:3600915/1‑149 (MQ=255) tccCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGa < 2:6375003/150‑1 (MQ=255) tccCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGa > 2:1194942/1‑150 (MQ=255) cccTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGAt < 1:1576055/150‑1 (MQ=255) tttCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTgcgc > 1:6740304/1‑150 (MQ=255) ttCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGcc > 2:6260710/1‑150 (MQ=255) ttCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGcc > 1:1967997/1‑150 (MQ=255) tctTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGc > 1:528700/1‑150 (MQ=255) ttCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCaa > 1:5413851/1‑150 (MQ=255) ctgactgaAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTcagca > 2:5766441/1‑150 (MQ=255) ctgactgaAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTcagca < 1:4323417/150‑1 (MQ=255) actgaAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTg > 2:486827/1‑150 (MQ=255) tgaAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGc > 1:1342227/1‑150 (MQ=255) tgaAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGc < 2:496826/150‑1 (MQ=255) tgaAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGc > 1:4458356/1‑150 (MQ=255) tgaAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGc > 2:5162172/1‑150 (MQ=255) gaAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGAGGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGcc > 2:5492024/1‑150 (MQ=255) aaaaaTGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCt > 2:1563668/1‑150 (MQ=255) aaaaaTGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCt < 2:4724466/150‑1 (MQ=255) aaaaTGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTg < 1:957744/150‑1 (MQ=255) aaaaTGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTg < 1:120705/150‑1 (MQ=255) aaaaTGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTg < 2:3107613/150‑1 (MQ=255) aaTGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGt > 2:3289878/1‑150 (MQ=255) aaTGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGt < 2:3046463/150‑1 (MQ=255) aTGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTa < 2:465388/150‑1 (MQ=255) tGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTgg > 1:499349/1‑96 (MQ=255) tGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAg > 1:5568632/1‑150 (MQ=255) gAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGt > 1:2527003/1‑150 (MQ=255) caacaTTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGAt > 2:5979888/1‑112 (MQ=255) caacaTTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGc > 1:4192341/1‑150 (MQ=255) caacaTTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGc < 1:4649110/150‑1 (MQ=255) aacaTTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCt > 1:887848/1‑150 (MQ=255) tttAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGccc < 1:1676972/150‑1 (MQ=255) tttAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGccc > 1:2341265/1‑150 (MQ=255) tttAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGccc > 2:228793/1‑150 (MQ=255) aaCCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGCCCGcc > 2:2863648/1‑150 (MQ=255) cAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGCCCGCCACt > 1:3462462/1‑150 (MQ=255) aGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGCCCGCCACTg > 2:6191346/1‑150 (MQ=255) ggCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGCCCGCCACTgg > 1:596990/1‑150 (MQ=255) gCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGCCCGCCACTggc > 1:5487894/1‑150 (MQ=255) gCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGCCCGCCACTggc < 2:559085/150‑1 (MQ=255) tATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGCCCGCCACTggcgg > 1:2224542/1‑150 (MQ=255) tCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGCCCGCCACTGgcggcg > 2:824493/1‑150 (MQ=255) cGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGCCCGCCACTGGCGGCGCa < 2:2969599/150‑1 (MQ=255) gTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGCCCGCCACTGGCGGCGCAt > 1:837196/1‑150 (MQ=255) atcccccTGTCGTCAACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGCCCGCCACTGGCGGCGCATCt > 2:2771445/3‑150 (MQ=255) cccccTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGCCCGCCACTGGCGGCGCATCTGt > 2:1637669/1‑150 (MQ=255) cccccTGTCGTCAACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGCCCGCCACTGGCGGCGCATCTGt > 1:2137907/1‑150 (MQ=255) cccTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGCCCGCCACTGGCGGCGCCTCTGTCa > 1:739726/1‑150 (MQ=255) cccTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGCCCGCCACTGGCGGCGCATCTGTCa > 1:2931304/1‑150 (MQ=255) tGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGCCCGCCACTGGCGGCGCATCTGTCATACCGc < 2:4078815/150‑1 (MQ=255) | TATCAGGAGTGGCGGGACCGGGCGGTGCAGATGGGCAGCACATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGCCCGCCACTGGCGGCGCATCTGTCATACCGC > NC_002947/226510‑226808 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |