Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,825,590 G→C 7.3% intergenic (+399/+113) PP_2473 → / ← PP_2474 hypothetical protein/glutathione S‑transferase family protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,825,5900GC 7.3% 1058.5 / 55.2 317intergenic (+399/+113)PP_2473/PP_2474hypothetical protein/glutathione S‑transferase family protein
Reads supporting (aligned to +/- strand):  ref base G (151/142);  new base C (10/13);  total (162/155)
Fisher's exact test for biased strand distribution p-value = 5.20e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.16e-01

Only 100 of 318 total aligned reads displayed.

TTATTGAAGGGATGCCCAGGGGTTAGTTCGAAAGTTTCTCCTCGTGGGTCAGATATATCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGACCGGCGTTGGTTTCTTGGAGGCTTTTTTTGCGAAGCCAGGTTTAATTGGCATCTATATCCAGTGCTCGCTTGTAAC  >  NC_002947/2825442‑2825737
                                                                                                                                                     |                                                                                                                                                   
   ttGAAGGGATGCCCAGGGGTTAGTTCGAAAGTTTCTCCTCGTGGGTCAGATATATCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAAcc                                                                                                                                                 >  1:388330/1‑150 (MQ=255)
     gAAGGGATGCCCAGGGGTTAGTTCGAAAGTTTCTCCTCGTGGGTCAGATATATCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCg                                                                                                                                               >  1:646676/1‑150 (MQ=255)
      aaGGGATGCCCAGGGGTTAGTTCGAAAGTTTCTCCTCGTGGGTCAGATATATCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCgg                                                                                                                                              >  1:4027602/1‑150 (MQ=255)
       aGGGATGCCCAGGGGTTAGTTCGAAAGTTTCTCCTCGTGGGTCAGATATATCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCggg                                                                                                                                             <  1:1574798/150‑1 (MQ=255)
        gggATGCCCAGGGGTTAGTTCGAAAGTTTCTCCTCGTGGGTCAGATATATCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGt                                                                                                                                            <  1:2433184/150‑1 (MQ=255)
         tgATGCCCATGTGTTAGTTCGAAAGTTTCTCCTCGTGGGTCAGATATATCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGTCTGATATAGAGAAAGTTCTTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGttt                                                                                                                                           <  2:6417999/149‑1 (MQ=255)
         ggATGCCCAGGGGTTAGTTCGAAAGTTTCTCCTCGTGGGTCAGATATATCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTTCGACCCGGGtt                                                                                                                                           <  1:784461/150‑1 (MQ=255)
          gATGCCCAGGGGTTAGTTCGAAAGTTTCTCCTCGTGGGTCAGATATATCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGttt                                                                                                                                          >  1:5185644/1‑150 (MQ=255)
          gATGCCCAGGGGTTAGTTCGAAAGTTTCTCCTCGTGGGTCAGATATATCCCATGATCGGTGGTCCGTGAGCTAGAAGTCGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTTCGACCCGGGttt                                                                                                                                          <  2:6197895/150‑1 (MQ=255)
             gCCCAGGGGTTAGTTCGAAAGTTTCTCCTCGTGGGTCAGATATATCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTTCGACCCGGGtttttg                                                                                                                                       <  2:2081098/150‑3 (MQ=255)
             gCCCAGGGGTTAGTTCGAAAGTTTCTCCTCGTGGGTCAGATATATCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCg                                                                                                                                       <  1:7036044/150‑1 (MQ=255)
             gCCCAGGGGTTAGTTCGAAAGTTTCTCCTCGTGGGTCAGATATATCCCAGGATCGGTGGTCCGTGAGCCAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCg                                                                                                                                       <  2:6846005/150‑1 (MQ=255)
              cccAGGGGTTAGTTCGAAAGTTTCTCCTCGTGGGTCAGATATATCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCgg                                                                                                                                      <  2:2643609/150‑1 (MQ=255)
               ccAGGGGTTAGTTCGAAAGTTTCTCCTCGTGGGTCAGATATATCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGt                                                                                                                                     >  2:7108991/1‑150 (MQ=255)
                cAGGGGTTAGTTCGAAAGTTTCTCCTCGTGGGTCAGATATATCCCATGATCGGTGGTCCGTGAGCTAGACGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGAAAAAACCCGGGTCGGACCCGGGTTGTAGGtt                                                                                                                                    >  2:3795018/1‑150 (MQ=255)
                cAGGGGTTAGTTCGAAAGTTTCTCCTCGTGGGTCAGATATATCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGtt                                                                                                                                    <  2:4422579/150‑1 (MQ=255)
                   gggTTAGTTCGAAAGTTTCTCCTCGTGGGTCAGATATATCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGGTTTTTGCTGGCTGTTATAGAGAAAGTGCGTCTGTTAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAg                                                                                                                                 <  1:5618015/150‑1 (MQ=255)
                      ttAGTTCGAAAGTTTCTCCTCGTGGGTCAGATATATCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCa                                                                                                                              >  1:4767853/1‑150 (MQ=255)
                      ttAGTTCGAAAGTTTCTCCTCGTGGGTCAGATATATCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCa                                                                                                                              <  1:1968104/150‑1 (MQ=255)
                        aGTTCGAAAGTTTTTCCTCGTGGGTCAGATATATCCCATGATCGGTGGTCCGTGAGCTAGTAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCgg                                                                                                                                              >  2:7251588/1‑132 (MQ=255)
                        aGTTCGAAAGTTTCTCCTCGTGGGTCAGATATATCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCgg                                                                                                                                              <  1:7251582/132‑1 (MQ=255)
                          ttCGAAAGTTTCTCCTCGTGGGTCAGATATATCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCg                                                                                                                          >  2:3458859/1‑150 (MQ=255)
                           tCGAAAGTTTCTCCTCGTGGGTCAGATATATCCCATGATCGGTGGTCCGTGAGCCAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCgg                                                                                                                         <  1:1856287/150‑1 (MQ=255)
                             gAAAGTTTCTCCTCGTGGGTCAGATATATCCCATGATCGGTGGTCCGTGATCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGtt                                                                                                                       <  1:2736622/150‑1 (MQ=255)
                             gAAAGTTTCTCCTCGTGGGTCAGATATATCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGtt                                                                                                                       <  2:1959629/150‑1 (MQ=255)
                               aaGTTTCTCCTCGTGGGTCAGATATATCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGa                                                                                                                     <  2:1322750/150‑1 (MQ=255)
                               aaGTTTCTCCTCGTGGGTCAGATATATCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCCGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGa                                                                                                                     <  1:730345/150‑1 (MQ=255)
                                aGTTTCTCCTCGTGGGTCAGATATATCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAg                                                                                                                    <  2:2187332/150‑1 (MQ=255)
                                aGTTTCTCCTCGTGGGTCAGATATATCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAg                                                                                                                    >  2:4868469/1‑150 (MQ=255)
                                    tctcCTCGTGGGTCAGATATATCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCt                                                                                                                >  2:4805021/1‑150 (MQ=255)
                                    tctcCTCGTGGGTCAGATATATCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCt                                                                                                                >  1:6564276/1‑150 (MQ=255)
                                      tcctcGTGGGTCAGATATATCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCttt                                                                                                              >  1:2335871/1‑150 (MQ=255)
                                         tcGTGGGTCAGATATATCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCGAAAACCCGGGTTCGACCCGGGtt                                                                                                                                           >  2:2498809/1‑118 (MQ=255)
                                         tcGTGGGTCAGATATATCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTgg                                                                                                           <  2:5004801/150‑1 (MQ=255)
                                          cGTGGGTCAGATATATCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTggg                                                                                                          <  2:2684871/150‑1 (MQ=255)
                                                tCAGATATATCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCGAAAACCCGGGTTCGACCCGGGtt                                                                                                                                           <  1:3784038/111‑1 (MQ=255)
                                                tCAGATATATCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCGAAAACCCGGGTTCGACCCGGGtt                                                                                                                                           >  2:3784038/1‑111 (MQ=255)
                                                tCAGATATATCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGa                                                                                                    >  1:3135520/1‑150 (MQ=255)
                                                 cacatatctCCCCTGATCGGTGGTCCGTGAGCGAGAAGTTGGGCTATTTGCTGGCAGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAACCCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGaa                                                                                                   <  2:5474505/147‑1 (MQ=255)
                                                    atatatCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTg                                                                                                >  1:7371874/1‑150 (MQ=255)
                                                      atatCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAg                                                                                              <  1:63438/150‑1 (MQ=255)
                                                        atCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCa                                                                                            >  2:6023180/1‑150 (MQ=255)
                                                         tCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCaa                                                                                           >  1:5901658/1‑150 (MQ=255)
                                                         tCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCaa                                                                                           >  2:7174457/1‑150 (MQ=255)
                                                         tCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCaa                                                                                           >  1:938172/1‑150 (MQ=255)
                                                         tCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCaa                                                                                           >  1:336727/1‑150 (MQ=255)
                                                         tCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGCTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCaa                                                                                           >  2:5695049/1‑150 (MQ=255)
                                                         tCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTGTTCGGTGGAGTCACTCGGTTGAGTCCGTTTGGGGTATGAATTGAGCaa                                                                                           >  2:1583538/1‑150 (MQ=255)
                                                           ccATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAAtg                                                                                         >  2:1281001/1‑150 (MQ=255)
                                                            cATGATCTGTGGACCTTTAGCAAGAAGATGGGCTATTTGCTGGCTGATATATAGAAAGTGCGTCTGAAAAAAAGAAAAAACCAGGGTCTAACCCGGATTGACGGTTGAGTCACTCGCTTGATTCATTTTGGGGTCTGAATTGAGCAAtgc                                                                                        >  2:4378015/1‑150 (MQ=255)
                                                            cATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGa                                                                                                                     <  1:1062295/121‑1 (MQ=255)
                                                            cATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAAtgc                                                                                        >  2:1902662/1‑150 (MQ=255)
                                                            cATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAAtgc                                                                                        >  2:3994527/1‑150 (MQ=255)
                                                             aTGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAAtgct                                                                                       >  2:2780125/1‑150 (MQ=255)
                                                                aTCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATgctgct                                                                                    <  2:7008518/150‑1 (MQ=255)
                                                                 tCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGa                                                                                                                                  >  1:1011898/1‑103 (MQ=255)
                                                                    gtggtCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCa                                                                                <  2:397672/150‑1 (MQ=255)
                                                                     tggtCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTc                                                                                                                           >  1:440469/1‑106 (MQ=255)
                                                                      ggtCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGa                                                                              <  2:646676/150‑1 (MQ=255)
                                                                      ggtCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGa                                                                              <  1:2877075/150‑1 (MQ=255)
                                                                      ggtCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGa                                                                              <  1:2578951/150‑1 (MQ=255)
                                                                       gtCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGAc                                                                             >  2:753393/1‑150 (MQ=255)
                                                                         ccGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGACCg                                                                           <  1:6506780/150‑1 (MQ=255)
                                                                           gTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGACCGGc                                                                         <  2:4185467/150‑1 (MQ=255)
                                                                              aGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGACCGGCGtt                                                                      <  2:4097588/150‑1 (MQ=255)
                                                                                      gTTGGGCTATTTGCTGGCTGATATAGAGACAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGACCGGCGTTGGTTTCtt                                                              <  2:6564276/150‑1 (MQ=255)
                                                                                      gTTGGGCTATTTGCTGGCTGATATAGAGAAATTGCGTCTGTAAAAAAGCAAAAACCCGTGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGTATTGAGCAATGCTTCTCTCAGACCGGCGTTGGTTTCtt                                                              <  2:34023/150‑1 (MQ=255)
                                                                                      gTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGACCGGCGTTGGTTTCtt                                                              <  2:7375175/150‑1 (MQ=255)
                                                                                        tGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGACCGGCGTTGGTTTCTTgg                                                            <  1:6216451/150‑1 (MQ=255)
                                                                                         gggCTATTTGCTGTCTGATATAGAGAAAGTGAGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGATCAATGCTGCTCTCAGACCGGCGTTGGTTTCTTGGa                                                           <  2:1368584/150‑1 (MQ=255)
                                                                                         gggCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGACCGGCGTTGGTTTCTTGGa                                                           <  1:486717/150‑1 (MQ=255)
                                                                                           gCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGACCGGCGTTGGTTTCTTGGAgg                                                         <  2:5185644/150‑1 (MQ=255)
                                                                                             tATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAATCCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTGGTTTTGGGGTCTGAATTGAGCAATGCTGCTCTCTGACCGGCGTGGGTTTCTTGGAGGCt                                                       >  1:7203775/1‑150 (MQ=255)
                                                                                             tATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGACCGGCGTTGGTTTCTTGGAGGCt                                                       >  2:3250035/1‑150 (MQ=255)
                                                                                                    tggctgATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGACCGGCGTTGGTTTCTTGGAGGCTTTTTTTg                                                >  1:4199827/1‑150 (MQ=255)
                                                                                                    tggctgATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGACCGGCGTGGGTTTCTTGGAGGCTTTTTTTg                                                >  2:3649624/1‑150 (MQ=255)
                                                                                                     ggctgATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGACCGGCGTTGGTTTCTTGGAGGCTTTTTTTGc                                               <  1:6677407/150‑1 (MQ=255)
                                                                                                        tgATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGACCGGCGTTGGTTTCTTGGAGGCTTTTTTTGCGaa                                            <  1:1522364/150‑1 (MQ=255)
                                                                                                              agagAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGACCGGCGTTGGTTTCTTGGAGGCTTTTTTTGCGAAGCCAgg                                      <  2:1460265/150‑1 (MQ=255)
                                                                                                              agagAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGACCGGCGTTGGTTTCTTGGAGGCTTTTTTTGCGAAGCCAgg                                      >  1:2189385/1‑150 (MQ=255)
                                                                                                                agaAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGACCGGCGTTGGTTTCTTGGAGGCTTTTTTTGCGAAGCCAGGtt                                    >  1:4282903/1‑150 (MQ=255)
                                                                                                                agaAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGACCGGCGTTGGTTTCTTGGAGGCTTTTTTTGCGAAGCCAGGtt                                    >  1:5745360/1‑150 (MQ=255)
                                                                                                                agaAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGACCGGCGTTGGTTTCTTGGAGGCTTTTTTTGCGAAGCCAGGtt                                    >  2:1048989/1‑150 (MQ=255)
                                                                                                                agaAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGACCGGCGTTGGTTTCTTGGAGGCTTTTGTTGCGAAGCCAGGtt                                    >  2:5536361/1‑150 (MQ=255)
                                                                                                                   aaGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGCCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGACCGGCGTTGGTTTCTTGGAGGCTTTTTTTGCGAAGCCAGGTTTaa                                 <  1:5289821/150‑1 (MQ=255)
                                                                                                                            tGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGACCGGCGTTGGTTTCTTg                                                             >  1:5031212/1‑113 (MQ=255)
                                                                                                                                    accgaaaaCCCGGGTTCGACCCGGGTTTTTGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGACCGGCGTTGGTTTCTTGGAGGCTTTTTTTGCGAAGCCAGGTTTAATTGGCATCTATATCCAg                <  2:3900507/146‑1 (MQ=255)
                                                                                                                                          aaCCCGGGTTCGACCCGGGTTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGACCGGCGTTGGTTTCTTGGAGGCTTTTTTTGCGAAGCCAGGTTTAATTGGCATCTATATCCAGTGCTc           >  2:846829/1‑150 (MQ=255)
                                                                                                                                          aaCCCGGGTTCGACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGACCGGCGTTGGTTTCTTGGAGGCTTTTTTTGCGAAGCCAGGTTTAATTGGCATCTCTATCCAGTGCTCg          >  2:5437706/1‑150 (MQ=255)
                                                                                                                                           aCCCGGGTTCGACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGACCGGCGTTGGTTTCTTGGAGGCTTTTTTTGCGAAGCCAGGTTTAATTGGCATCTATATCCAGTGCTCGc         >  1:1326768/1‑150 (MQ=255)
                                                                                                                                           aCCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGACCGGCGTTGGTTTCTTGGAGGCTTTTTTTGCGAAGCCAGGTTTAATTGGCATCTATATCCAGTGCTCGc         >  2:1127939/1‑150 (MQ=255)
                                                                                                                                           aCCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGACCGGCGTTGGTTTCTTGGAGGCTTTTTTTGCGAAGCCAGGTTTAATTGGCATCTATATCCAGTGCTCGc         >  2:59590/1‑150 (MQ=255)
                                                                                                                                           aCCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGACCGGCGTTGGTTTCTTGGAGGCTTTTTTTGCGAAGCCAGGTTTAATTGGCATCTATATCCAGTGCTCGc         <  1:3274646/150‑1 (MQ=255)
                                                                                                                                           aCCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGACCGGCGTTGGTTTCTTGGAGGCTTTTTTTGCGAAGCCAGGTTTAATTGGCATCTATATCCAGTGCTCGc         >  2:4667673/1‑150 (MQ=255)
                                                                                                                                           aCCCGGCGCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGACCGGCGTTGGTTTCTTGGAGGCTTTTTTTGCGAAGCCAGGTTTAATTGGCATCTATATCCAGTGCTCGc         <  1:6056697/150‑1 (MQ=255)
                                                                                                                                             ccGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGACCGGCGTTGGTTTCTTGGAGGCTTTTTTTGCGAAGCCAGGTTTAATTGGCATCTATATCCAGTGCTCGCtt       <  2:30773/150‑1 (MQ=255)
                                                                                                                                               gggTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGACCGGCGTTGGTTTCTTGGAGGCTTTTTTTGCGAAGCCAGGTTTAATTGGCATCTATATCCAGTGCTCGCTTGt     >  2:822860/1‑150 (MQ=255)
                                                                                                                                                 gTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGACCGGCGTTGGTTTCTTGGAGGCTTTTTTTGCGAAGCCAGGTTTAATTGGCATCTATATCCAGTGCTCGCTTGTaa   <  2:6665739/150‑1 (MQ=255)
                                                                                                                                                 gTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGACCGGAGTTGGTTTCTTGGAGGCTTTTTTTGCGAAGCCAGGTTTAATTGGCATCTATATCCAGTGCTCGCTTGTaa   <  1:1194065/150‑1 (MQ=255)
                                                                                                                                                   tCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGACCGGCGTTGGTTTCTTGGAGGCTTTTTTTGCGAAGCCAGGTTTAATTGGCATCTATATCCAGTGCTCGCTTGTAAc  >  2:5733462/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
TTATTGAAGGGATGCCCAGGGGTTAGTTCGAAAGTTTCTCCTCGTGGGTCAGATATATCCCATGATCGGTGGTCCGTGAGCTAGAAGTTGGGCTATTTGCTGGCTGATATAGAGAAAGTGCGTCTGTAAAAAAGCAAAAACCCGGGTCGAACCCGGGTTTTCGGTTGAGTCACTCGGTTGAGTCCTTTTGGGGTATGAATTGAGCAATGCTGCTCTCAGACCGGCGTTGGTTTCTTGGAGGCTTTTTTTGCGAAGCCAGGTTTAATTGGCATCTATATCCAGTGCTCGCTTGTAAC  >  NC_002947/2825442‑2825737

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: