| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,962,080 | G→A | 5.7% | intergenic (+43/‑153) | PP_2588 → / → PP_2589 | class III aminotransferase/aldehyde dehydrogenase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,962,080 | 0 | G | A | 5.7% | 934.7 / 30.2 | 298 | intergenic (+43/‑153) | PP_2588/PP_2589 | class III aminotransferase/aldehyde dehydrogenase family protein |
| Reads supporting (aligned to +/- strand): ref base G (139/142); new base A (2/15); total (141/157) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.24e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.15e-01 | |||||||||||
Only 100 of 301 total aligned reads displayed.
TGATCATGGCCCCGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAG > NC_002947/2961931‑2962227 | tCATGGCCCCGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGccc > 1:1281017/1‑150 (MQ=255) cATGGCCCCGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCcg > 1:7445733/1‑150 (MQ=255) tGGCCCCGGCCTTGATCGACAACCACAGCGAGATGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGTGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCcgcg > 2:6474794/1‑150 (MQ=255) gCCCCGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGaa > 1:4260331/1‑150 (MQ=255) gCCCCGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGaa < 2:5116458/150‑1 (MQ=255) caacgagaccgacgtcctgaccgacgctcagcgcaactatgccgaacagcagtacgcgctgttccgcagctggtatgccagctggtcggccgagcaaaacatcgcctgagcagccactgctctccctgtgGGAGCGGGCACgcccgctcc < 1:4871971‑M2/20‑4 (MQ=255) cGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGACGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACAcc < 2:4783957/150‑1 (MQ=255) tccgaggcgcgttgttgccagaattcgagagtgtacatttgtactccaaacgaccgtcgtggcggtccttcttgcgcaagtaacaggtaccacacagtccgcaagcacgccgcactccctCTGTGGGAGCGGGCACGCCCGCGAACACCg > 1:680427‑M1/121‑150 (MQ=255) gCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCgg < 1:1616995/150‑1 (MQ=255) ccTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGc < 2:7413303/150‑1 (MQ=255) tGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGaa < 1:3551346/150‑1 (MQ=255) gATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAg > 2:1444843/1‑150 (MQ=255) cGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCg < 1:991054/150‑1 (MQ=255) gCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGTGGGCACGCCCGCGAACACCGGCGAAGCCgg > 1:2168008/1‑150 (MQ=255) gCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCgg > 1:7339596/1‑150 (MQ=255) aaCCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGc < 2:1364345/150‑1 (MQ=255) ccACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCa > 2:2737667/1‑150 (MQ=255) acaGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATc > 1:101079/1‑150 (MQ=255) acaGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATc < 1:3613032/150‑1 (MQ=255) acaGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATc < 2:4598023/150‑1 (MQ=255) acaGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATc > 2:7087942/1‑150 (MQ=255) aGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCa < 1:577894/150‑1 (MQ=255) aGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCa > 1:6813522/1‑150 (MQ=255) gCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCAc < 1:3751053/150‑1 (MQ=255) ggATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCg > 2:3501433/1‑150 (MQ=255) gATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCACGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGc < 2:1146553/150‑1 (MQ=255) aTGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGcc < 1:4800820/150‑1 (MQ=255) aTGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGcc < 1:6908062/150‑1 (MQ=255) aTGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGcc < 2:6940553/150‑1 (MQ=255) gCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCCCGCCCGCGAACACCGGCGAAGCCGGTGCCATCCCCCGTGTCGCCTGag > 2:381073/1‑149 (MQ=255) cTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGAtt > 2:1178139/1‑150 (MQ=255) cTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGAtt < 2:1702499/150‑1 (MQ=255) acatttgtactccaaacgaccgtcgtggcggtccttcttgcgcaagtaacaggtaccacacagtccgcaagcacgccgcactccctCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGAtt < 1:7086631‑M1/64‑1 (MQ=255) ttgtactccaaacgaccgtcgtggcggtccttcttgcgcaagtaacaggtaccacacagtccgcaagcacgccgcactccctCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTcgcg > 2:2248646‑M1/83‑150 (MQ=255) tggAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTcgcg < 2:2936086/150‑1 (MQ=255) gaacagcagtacgcgctgttccgcagctggtatgccagctggtcggccgagcaaaacatcgcctgagcagccactgctctccctgtgGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTGATTcgcg < 1:1763133‑M2/63‑1 (MQ=255) agtacaccaaaccaccgtcgtggcgcacatacttgcgcaagtaacaggtaccacacagtccgcaagcacgccgcactccctCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCgg > 2:3877752‑M1/82‑150 (MQ=255) gtactccaaacgaccgtcgtggcggtccttcttgcgcaagtaacaggtaccacacagtccgcaagcacgccgcactccctCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCggg > 2:6199821‑M1/81‑150 (MQ=255) gagaAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCggg < 1:299719/150‑1 (MQ=255) gagaAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCggg < 1:7268372/150‑1 (MQ=255) tactccaaacgaccgtcgtggcggtccttcttgcgcaagtaacaggtaccacacagtccgcaagcacgccgcactccctCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGc > 1:4558698‑M1/80‑150 (MQ=255) ctccaaacgaccgtcgtggcggtccttcttgcgcaagtaacaggtaccacacagtccgcaagcacgccgcactccctCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCAt > 2:1642596‑M1/78‑150 (MQ=255) ctccaaacgaccgtcgtggcggtccttcttgcgcaagtaacagggaccacacagtccgcaagcacgccgcactccccCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCAt > 2:6553310‑M1/78‑150 (MQ=255) aagaCCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCAt < 2:4985142/150‑1 (MQ=255) gaCCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGc < 2:5153167/150‑1 (MQ=255) aCCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGTTTCGCGGGCATGcc > 1:1136263/1‑150 (MQ=255) cccGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGccc > 2:4287668/1‑150 (MQ=255) ccGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCCCGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCg > 1:2025599/1‑150 (MQ=255) ccGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCTCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCg > 1:6161063/1‑150 (MQ=255) ccGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCg > 2:1094422/1‑150 (MQ=255) cgaccgtcgtggcggtccttcttgcgcaagtaacaggtaccacacagtccgcaagcacgccgcactccctCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCt > 2:256637‑M1/71‑150 (MQ=255) gctgttccgcagctggtatgccagctggtcggccgagcaaaacatcgcctgagcagccactgctctccctgtaGGAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTGATTCGCGGGCACGCCCGCTcc > 2:264635‑M2/74‑150 (MQ=255) ttccgcagctggtatgccagctggtcggccgagcaaaacctcgcctgagcagccactgctctccctgtaGGAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTGATTCGCGGGCACGCCCGCTCCcaca < 1:2653765‑M2/81‑1 (MQ=255) ttccgcagctggtatgccagctggtcggccgagcaaaacatcgcctgagcagccactgctctccctgtaGGAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTGATTCGCGGGCACGCCCGCTCCcaca < 1:264635‑M2/81‑1 (MQ=255) cGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACag > 1:7217237/1‑150 (MQ=255) gTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACaga < 1:3691836/150‑1 (MQ=255) tAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACagag < 2:2350189/150‑1 (MQ=255) cagctggtatgccagctggtcggccgagcaaaacatcgcctgagcagccactgctctccctgtGGAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTGATTCGCGGGCACGCCCGCTcccacagggaga < 2:3287619‑M2/87‑6 (MQ=255) agctggtatgccagctggtcggccgagcaaaacatcgcctgagcagccactgctctccctgtaGGAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTGATTCGCGGGCACGCCCGCTcccacagggaga < 2:1014409‑M2/87‑6 (MQ=255) ctggtatgccagctggtcggccgagcaaaacatcgcctgagcagccactgctctccctgtaGGAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTGATTCGCGGGCACGCCCGCTCCCACAGGgagagc < 2:5042873‑M2/89‑2 (MQ=255) cGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGt > 2:5934083/1‑150 (MQ=255) tggtatgccagctggtcggccgagcaaaacatcgcctgagcagccactgctctccctgtgGGAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTGATTCGCGGGCACGCCCGCTCCCACAGggagagca < 1:5918016‑M2/90‑3 (MQ=255) gCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTg > 1:541338/1‑150 (MQ=255) cACGGCGCGGCTGGTCGGCAAGCTGTAAGCAGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAACCCGGTGCCATAAAACCTGTCGCCTGATTCGCGGGCATGACCGCTCCCACAGAGGGAGTgc > 1:6540294/1‑150 (MQ=38) ggCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTgcggc < 1:4603587/150‑1 (MQ=255) ggCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTgcggc < 1:4076554/150‑1 (MQ=255) tcttgcgcaagtaacaggtaccacacagtccgcaagcacgccgcgcttccCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTgcggcg > 1:5084315‑M1/51‑150 (MQ=255) cgcgGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGt < 2:3431754/150‑1 (MQ=255) gcggcgGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTg < 1:3338421/150‑1 (MQ=255) gcgGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATc > 1:3462305/1‑95 (MQ=255) ggTCGGCCAGCTGTAAGCCGCGGACCCGGGCAACGCGCTTCCCTGGGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCg < 1:6453033/150‑1 (MQ=37) ggTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCg < 1:2317074/150‑1 (MQ=255) ggCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACt > 2:439720/1‑150 (MQ=255) cAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACtgt > 2:2176713/1‑150 (MQ=255) aaGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACtgtg < 1:2088087/150‑1 (MQ=255) cTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTgg < 2:1280759/150‑1 (MQ=255) cTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTgg > 1:4324525/1‑150 (MQ=255) tAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGc < 1:2831819/136‑1 (MQ=255) tAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGc > 2:2831819/1‑136 (MQ=255) tAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTAc < 2:3344531/150‑1 (MQ=255) tAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTAc < 2:1973516/150‑1 (MQ=255) gCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTa < 1:1959982/150‑1 (MQ=255) gACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGCACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCAGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCAGTTACtt > 1:2610884/1‑150 (MQ=255) gACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACtt < 1:34020/150‑1 (MQ=255) aaGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGGAGCCGGTGCCATCCACCCTGTCGCCTGATTCGCGGGCATGCCCCCGCCCACAGCGGGAGTGCGGCGGGCTTGCGGGCGGTGGGGTGCCGGGTACGTgcg > 1:277334/1‑150 (MQ=37) aaGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACtgtgtg < 1:38517/134‑1 (MQ=255) cAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGGGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCaaga > 2:881042/1‑150 (MQ=255) ttCCCTGTGGGAGCGGGCCCGCCCGCGGACACCCGCGAAGCCCGTGCCATCCACCCTGTCGCCTGATTCGCCGGCATGCCCCCACCCACAGAGGGAGTGCGGCGTGCGTTCGGCCGGTGTGGTAACAGTTACATGCGCAAGAAAGACCGc > 1:6290869/1‑150 (MQ=21) ttCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGc < 2:3098015/150‑1 (MQ=255) cccTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCa < 2:6099011/150‑1 (MQ=255) CTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTATGGTACCTGTTACTTGCGCAAGAAGGACCGCCacg < 2:4060570‑M1/150‑1 (MQ=255) TGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCggg > 2:5605528‑M1/1‑67 (MQ=255) TGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCggg < 1:5605528‑M1/67‑1 (MQ=255) GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGtcgtgtg < 1:1826038‑M1/150‑4 (MQ=255) GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTg > 1:6061384‑M1/1‑150 (MQ=255) GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTg > 1:14573‑M1/1‑150 (MQ=255) GCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTgg < 2:4494308‑M1/150‑1 (MQ=255) CACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGa > 2:5291698‑M1/1‑150 (MQ=255) CACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGa > 2:2161923‑M1/1‑150 (MQ=255) ACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAg > 2:1471634‑M1/1‑150 (MQ=255) | TGATCATGGCCCCGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAG > NC_002947/2961931‑2962227 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |