| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,058,210 | G→A | 9.2% | intergenic (+19/+27) | PP_2664 → / ← agmR | two‑component system sensor histidine kinase/response regulator/glycerol metabolism activator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,058,210 | 0 | G | A | 9.2% | 452.8 / 29.1 | 173 | intergenic (+19/+27) | PP_2664/agmR | two‑component system sensor histidine kinase/response regulator/glycerol metabolism activator |
| Reads supporting (aligned to +/- strand): ref base G (80/66); new base A (7/8); total (87/86) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.95e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.35e-01 | |||||||||||
Only 100 of 177 total aligned reads displayed.
CACGGTCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCGGCGAT > NC_002947/3058062‑3058359 | tCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATc < 1:3494988/150‑1 (MQ=255) cTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGGTGATCcgcg > 2:1110358/1‑150 (MQ=255) tACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGa < 1:4733581/150‑1 (MQ=255) tACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGTTTTTCcgcca > 1:1865160/1‑148 (MQ=255) aCAGCAACGATCTCAAGCAGCAGATCCGCGATCTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGGCGCTTCGCGGGGTGTTCcgcggg > 2:7344780/1‑148 (MQ=255) aCAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTTATCCGCGaa < 2:7219527/150‑1 (MQ=255) aCAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGaa < 2:4110762/150‑1 (MQ=255) aCAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGaa < 1:3581174/150‑1 (MQ=255) cgCAACGATCTCAAGCCGCAGATCCGCGAACTGGGTCACACGCTGAGGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCGGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGc < 2:5882547/149‑1 (MQ=255) aGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGc < 2:3299460/150‑1 (MQ=255) aGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGATCAACCCGCGAAGc < 2:4513845/150‑1 (MQ=255) aGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGATCAACCCGCGAAGc < 2:5379460/150‑1 (MQ=255) cAACGATCTCTAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGTAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCgg < 2:6641113/150‑1 (MQ=255) cAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCgg > 1:2981686/1‑150 (MQ=255) cAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGATCAACCCGCGAAGCgg < 1:5985809/150‑1 (MQ=255) aaCGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCgg < 2:2966331/149‑1 (MQ=255) aaCGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATACGCGAAGCGGc > 2:3774796/1‑150 (MQ=255) cGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGATCCATCTGCTGGCAAGTGGCTTGGCATAGCGGTTGGCCGAATCCCCGGTTGATCCGCGGAGCGGCCg > 2:6911718/1‑150 (MQ=255) cGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCg < 2:7274035/150‑1 (MQ=255) gATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTGGCGGGTTGTTCCGCGAAGCGGCCgg > 1:6616467/1‑150 (MQ=255) gATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTCGGCCGCTTCGCGGATCAACCCGCGAAGCGGccaa < 1:2886255/150‑3 (MQ=255) ctcAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTGGCGGGTTTATACCCGAAGCGGCCCGAAc > 1:878731/1‑150 (MQ=255) tcAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGGTGGTCCCCGAAGCGGCCGGAAcc > 1:2916243/1‑149 (MQ=255) tcAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCATCGCGGGTTTATACGCGAAGCGGCCGGAACa > 1:5511216/1‑150 (MQ=255) aaGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATACGCGAAGCGGCCGGAAAAGc > 2:1044717/1‑150 (MQ=255) gcagcaGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTc > 2:4319963/1‑150 (MQ=255) gcagATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACCGTTCAAc > 2:6291048/1‑150 (MQ=255) cagATCCGCTAAGTGGGTCACACGCTTTTGCACACGCCCGTATGACCGATGAACCTCACGACGGCGATGAGCCATGTGCTGGCCCGTGGCTTGGAATCGGGGTTGGCGGCTTCGCGGTTTGATCCGCGAAGCGGCCGGAACAGCTCAACg < 2:1392536/150‑1 (MQ=255) cagATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACg > 2:4799284/1‑150 (MQ=255) gcgACCGGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGGTGCTCCGCGACGCGGCCGGAACAGCTCCACGGCGCCGa > 2:2339308/1‑150 (MQ=255) gcgAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGGTGGTACGCGCAGCCGCCGGAACAGCTCAACGGCGCaca > 1:4337896/1‑148 (MQ=255) acacGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGACCAGCTCAACGGCGCAGATAATAAGCaaaa > 1:6768480/1‑150 (MQ=255) acacGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCaaaa < 2:5553019/150‑1 (MQ=255) cacGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGTTTGTGCCCGGAGCGGCCGGGCCAGCTCAACGGCGCAGATAATCAGCaaaaa > 1:2593128/1‑149 (MQ=255) acGCTGATGCACACGCCCGTACGACCGATGAAACAAAACACGCCTATGAGCCATCTGCTGGCCATTGGCTTGGCATAGCGTTTGGCCGCTTCGGGGGTTTTTCCGCGAAGGGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATc < 1:6650437/150‑1 (MQ=255) gCTTATGCACACGCCCGTAAGACCTATGAAACACACGACGGCGATGAGCAATCTGGTGGCCATTGGCTTGGCTTAGGGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGa < 2:1972833/150‑1 (MQ=255) gCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGa > 2:1193115/1‑150 (MQ=255) gCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATAAGCAAAATCGa > 2:1192807/1‑150 (MQ=255) cttttgaacaAGCCCGTAAGACCTATGAAACTAAAGCGGGCTATGTGCCATGTGCTGGCCTGTGGCTTGGATTAGGGTTTGGCCGCTGGGGGGTTTTATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGat < 2:2052046/143‑1 (MQ=255) tGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGAAAATCAGCAAAATCGata > 2:5449663/1‑150 (MQ=255) ttccacaCGCCGTTAAGACCTATAAAACTCAAGCGGGCTTTGCGCCTTGTGGTGGCCTGTGGGTTGGATTTGGGGTGGGCCGATGGGGGTTTTTATCCGCGACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATc < 1:5619748/147‑1 (MQ=255) aTGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGCAGCGGCCGGGACAGCTCAACGGCGCAGATAATCAGCAAAATCgctggg > 2:6542423/1‑145 (MQ=255) cacaAGCCCGTAAGACCGATGAAACACAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGcc < 2:6813067/150‑1 (MQ=255) acaAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTAGCGGGTTGATACGCGAAGCGGCCGGGACCGCTCAACGGCGCCGATAAAAAGCAAAATCGATAACGccc > 2:5709105/1‑149 (MQ=255) aaGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGTTCCGCGAAGCGGCCGGCACACCGCCACCGCGCAGATAATCACCCAAAACGATATAGccccc > 1:7167784/1‑147 (MQ=255) aaGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGGTGATCCGCGAAGCGGCCGGAACAGCACAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGc > 2:4927047/1‑150 (MQ=255) aaGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGGTTTGACGCCCACCGGCCGGGACACCACAAACGCGCCGCTAATAAGCCAAAACGATAACGCCacc > 1:4541930/1‑148 (MQ=255) aGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATAGCCAGCa > 2:5241316/1‑150 (MQ=255) ccGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGGTGATCCGCGCAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATAGCCAGCACTg > 2:4480287/1‑150 (MQ=255) cttAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCTTAGCGGTTGGCCGCTTCGCGGTTTGATCCGCTAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGa < 2:7107392/148‑1 (MQ=255) cGTAAGACCTTTGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCTGTGGCTTGGAATAGCGTTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGa < 2:3326488/150‑1 (MQ=255) gTAAGACCGATGAAACTCAAGACGGCGTTGAGCCATCTGCTGGCCAGTGGCTTGGCATCGCGGTTGGCCGCTTCGCGGGTTGATCCGCGACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAg < 2:5111184/150‑1 (MQ=255) acgACCGTTGAAACTCAAGAGGGGGTTGCGCCTTCTGCGGGCCTGTGGCTTGGCTTTGGGGTTGGCCGGTTCGGGGGTTGTTCCGGGATGGGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGa < 2:3178359/148‑1 (MQ=255) aCCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCCCGTCGCCGGTTGATCCGCGAAGCGGCCCGAACAGCTCAAACGCGCAGATAATCACCAAAAACGAAAACGCCAGCACGGAGGATgg > 2:2778567/1‑150 (MQ=255) ccGATGAAACTCACGACGGCGATGAGCCATCGGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGc < 1:4889866/150‑1 (MQ=255) tatcaaccTCACGACGGCGATGCGCCATCTGCTGGCCTGTGGTTTGGATTAGGGGTGGGCCGCTTGGGGTTTTTATCGGCGACGGGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCtt < 1:1027242/143‑1 (MQ=255) gATGAACCTCAAGACGGCGTTGAGCCATCTGCTGGCCTGTGGATTGGAATTGCGTTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCtt < 2:81074/150‑1 (MQ=255) gATGAAACTCACGCGGGCGTTGCGCCTTCGGGGGGCCCGTGGGTTGGCATCGCGGTGGGCGGGGTCGGGGGTTGAGCGGCGCAGGGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATCTCGCCAGCACTGAGGATGGCtt < 1:4751778/150‑1 (MQ=255) gATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGt > 2:4929770/1‑72 (MQ=255) gATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCtt < 1:7427244/150‑1 (MQ=255) gATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGTTGATCCGCCAAGCGGCCGGGACAGCTCAACGGCGCAGATAAACAGCAAAATCGAAATCCCCCGCACAGAGGCTGGcgt > 2:4005121/1‑148 (MQ=255) atcaaaCTCAAGAGGGCTAGGAGCATTCTGGTGGCCTGTGGATTGGCTTTGGGGTTGGCCGCTTCGGGGGTTGTGCGGCGATGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTg < 1:6500413/147‑1 (MQ=255) aaaCTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGTTGCCCGAAGCGGCCGGGCAACCTCAACCCCGCAGATAAAAAGCAAAATAGATATATCCACCACAGAGGATGGCtcaacg > 2:1447893/1‑145 (MQ=255) tCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATACGCGAAGCGGCCGGAACAGCGCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCgg > 2:5980075/1‑150 (MQ=255) aaGCCGGCGATGAGCAATCTGGTGGCCAGTGGATTGGCATCGCGGTTGGCCGCTTCGGGGGTTGATCCGCGACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGtt < 1:1189662/150‑1 (MQ=255) aaGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGGACAGCTCAACGGCGCAGCTAATCAGCAAAAACCATATAGCCCGCACAGAGGTTGGCGTGTAACCgggt > 1:4952747/1‑148 (MQ=255) aGACGGCGATGCGCCTTGTGGTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGCGCCGCGACGGGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTtg < 2:2528178/150‑1 (MQ=255) aGACGGCGATGAGTCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGGTGATCCGCGAAGCGGCCGGGCCAGCGCAACCGCGCCGATAATCCGCCAAATCGATATCGCCAGCACGGAGGCTGGCGTGTACCCGGTtg > 1:7282955/1‑150 (MQ=255) cccGGCGTTGCGCCATGTGGGGGCCCGGGGTGTGGCAGCGGGGTTGGCCGATTGGGGGGTTGATCCGCGACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGAGGGCTTGTACCCGGTtgt < 1:1371298/148‑1 (MQ=255) ccGGCGATGAGCCATCTGCTGGCCTGTGGGTTGGCATAGCGGTGGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTtgtg < 2:331513/149‑1 (MQ=255) aCGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTtgtg < 2:3053154/150‑1 (MQ=255) ggCGATGAGCCATCTGCTGGCCCGGGGCTTGGCATAGCGGTGGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGca < 2:5038617/150‑1 (MQ=255) cGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGcaca < 2:6106697/150‑1 (MQ=255) tacaaaTCTGCTGCCAAGTGTATTGCAATAGCGTTTGCCCTATTCGCGTTTTTATCCCCCAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGa < 1:5344878/145‑1 (MQ=255) tgtgctgGCCCGGGGGTGGGCATCGGGGTGGGCCGCTTGGGGGTTTTCCCGGCTACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTgc < 1:2784181/148‑1 (MQ=255) tCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAAACAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTgc > 2:3675233/1‑150 (MQ=255) actgctgGCCCGTGGCTTGGCATAGCGTTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGTTAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTgc < 2:6129397/149‑1 (MQ=255) ctgGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCaa < 2:5218124/150‑1 (MQ=255) ctgGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCaa < 2:5218171/150‑1 (MQ=255) cAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCGTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCg > 2:6757414/1‑150 (MQ=255) tggggCTTGGCATAGCGGTTGGCCGCTTCGGGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGc < 1:1066891/147‑1 (MQ=255) gTGGCTTGGCATCGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGcc < 1:2423974/150‑1 (MQ=255) cTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGaaa < 2:1865160/150‑1 (MQ=255) ctttgCGGTTGGCCGCTTGGCGGTTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTgg < 2:6448117/146‑1 (MQ=255) cATAGCGGTTGGCCGCTTCGCGGGTTGATACCCCAAGCCGCCCGTACAGCGCAACGGCGCAGAAAAACAGCAAAATCCATATCCCCAGCACAGAGGAAGGCATTTTCCCGGTTGTTCACCATGAGGTTTCGCAAAAACCCCGAAACCTgg > 2:2221583/1‑150 (MQ=255) gCCGCTTCGCGGTTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggt < 2:4542170/150‑1 (MQ=255) cccGCTTCGCGGGTTGATCCCCTAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggt < 2:707765/149‑1 (MQ=255) ccGCTTCGGGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtg < 2:3471803/150‑1 (MQ=255) ccGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtg < 2:2338166/150‑1 (MQ=255) ccGCTTCGCGGATCAACCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtg > 1:7003705/1‑150 (MQ=255) ccGCTTCGCGGATCAACCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtg > 1:7171732/1‑150 (MQ=255) cGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtgg > 1:191024/1‑150 (MQ=255) gCTTCGCGGGTTGATCCGCGACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtggt < 2:385093/150‑1 (MQ=255) gCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtggt > 2:6683815/1‑150 (MQ=255) cTTCGCGGATCAACCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGtt > 1:797137/1‑150 (MQ=255) ttCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGttt > 2:6699761/1‑150 (MQ=255) ttCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGttt > 2:6114620/1‑150 (MQ=255) ttCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGttt > 2:3480467/1‑150 (MQ=255) ttCGCGGATCAACCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGttt > 1:6405997/1‑150 (MQ=255) ggTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCGGCGa > 1:3528228/1‑150 (MQ=255) | CACGGTCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCGGCGAT > NC_002947/3058062‑3058359 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |