| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,059,723 | G→T | 5.4% | intergenic (‑206/+102) | PP_2666 ← / ← PP_2667 | hypothetical protein/ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,059,723 | 0 | G | T | 5.4% | 627.8 / 19.1 | 187 | intergenic (‑206/+102) | PP_2666/PP_2667 | hypothetical protein/ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base G (48/129); new base T (4/6); total (52/135) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.68e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.44e-01 | |||||||||||
Only 100 of 193 total aligned reads displayed.
CGACGATAGACAGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGAGGA > NC_002947/3059576‑3059871 | cgacgaTAGACAGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTCGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGAGGCCTTGCGTCGCGAAAGGGCCGCGCa < 2:5393720/150‑1 (MQ=255) gacgaTAGACAGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAg < 1:4187652/150‑1 (MQ=255) gacgaTAGACAGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAg > 2:6285749/1‑150 (MQ=255) agaTAGACAGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCg < 2:2465851/149‑1 (MQ=255) tAGACAGTAAAGGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGcc < 2:1880192/150‑1 (MQ=255) gACAGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGGCGTGGGGGGCGGAATGGGCGCGCCCCGGcccc > 2:5834029/1‑150 (MQ=37) aCAGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCa < 2:143219/150‑1 (MQ=255) aGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGGCGTGGGGCGCGCAAAGGCCCCGCCGCCGccccccg > 2:695467/1‑147 (MQ=37) aGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCTGCGCGGccctttc < 2:7272/150‑5 (MQ=255) aGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCTGCGCGGccctttc < 2:7048/150‑5 (MQ=255) aGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAgg > 2:3010455/1‑150 (MQ=255) aGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAgg < 2:1126418/150‑1 (MQ=255) aGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAgg < 1:3010455/150‑1 (MQ=255) aaTGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCTGCGCGGcccttt > 1:1311902/1‑142 (MQ=255) aaTGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCGGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGAtct < 2:1699448/150‑1 (MQ=255) aTGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGACGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGAtctc < 2:1016516/150‑1 (MQ=255) tGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCg < 2:276162/150‑1 (MQ=255) tGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCg < 2:5661553/150‑1 (MQ=255) tGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCg < 2:665459/150‑1 (MQ=255) cAGTACTAAAGTATTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGc < 1:6961424/150‑1 (MQ=255) tACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCTGCGCGGccc < 2:5640792/135‑1 (MQ=255) cTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGcatcat < 1:4919024/150‑1 (MQ=255) tAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGccc < 2:4554324/132‑1 (MQ=255) tAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGccc > 1:4554324/1‑132 (MQ=255) tAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATg < 1:5640806/150‑1 (MQ=255) gtagATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GAt < 1:4482020/150‑1 (MQ=255) gATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGc > 1:28342/1‑150 (MQ=255) agggCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCACATTTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCt < 1:5328267/148‑1 (MQ=255) aTGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCt < 2:5948995/150‑1 (MQ=255) tGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTg < 1:1111709/150‑1 (MQ=255) ggCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTgg < 1:3678579/150‑1 (MQ=255) gCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTggg < 2:614884/150‑1 (MQ=255) ccTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCttt < 1:4672679/150‑1 (MQ=255) ggAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGc < 1:716725/149‑1 (MQ=255) gAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCg < 2:348516/150‑1 (MQ=255) gAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCGTGCGGAGGGCAAGGGGCGCGCCCCCGCCCCCCGCACACGGCCTAAAGCCTA‑GGATGCGGGGGGCGCCTTGCg > 2:492182/1‑150 (MQ=12) aaGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCgg < 2:1794875/150‑1 (MQ=255) aaGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCgg < 2:6502126/150‑1 (MQ=255) aGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCTATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGc < 2:2710732/150‑1 (MQ=255) ggCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGcc < 2:6107279/150‑1 (MQ=255) ggCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGcc < 1:6104291/150‑1 (MQ=255) aTGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCAAAGCGGcccca < 1:6738291/150‑3 (MQ=255) aTGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCAAAGCGGcccca < 1:3800546/150‑3 (MQ=255) gagaCGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATcg > 1:7416401/1‑150 (MQ=255) agaCGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GCTTGCTGGGGCCGCTTTGCGGCCCAATcgc < 2:7416401/150‑1 (MQ=255) agaCGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATcgc < 1:3071641/150‑1 (MQ=255) agaCGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATcgc < 1:5287860/150‑1 (MQ=255) aCGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGa < 1:5189370/150‑1 (MQ=255) aGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAgg < 2:4373605/150‑1 (MQ=255) aaCTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAg > 2:300004/1‑75 (MQ=255) ttGCTCAATTTCTGAAAGCTGGCGCTATCCCTGTGGGAGGGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACgg < 1:110996/150‑1 (MQ=255) ttGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACgg < 2:1011664/150‑1 (MQ=255) tGCTAATTTTCTGAAAGCTGGCGCGATCCGTGTGGGAGCGGCGTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGAATAATGAATA‑TATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACggg < 1:6892205/150‑1 (MQ=37) cAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTac < 1:1201748/150‑1 (MQ=255) ttCTGAAAGCTGGCGCGATCCCTGTGGGAGAGGCCTTGCGTAGAGAAAGTGCCGCGCACCGGCCCCAGGATCTAGGCAACATGCATA‑GATTTCTGGGGCCGCTTTGCGGCCCCATCGCGAAACAACTACCCTCCCACAACGTTTACACGc > 2:4865687/1‑150 (MQ=255) tCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGcc < 1:7248614/150‑1 (MQ=255) cTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCa < 2:4382862/150‑1 (MQ=255) cTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCa < 2:3650662/150‑1 (MQ=255) tGAACGCGGGCGCGATCCCTGTGGGCGCGGCCTTGCGTCGCGAACGGGCCGCGCCGCGGCCCCAGTATCTCGGCATCATGCATT‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAg < 1:3920713/150‑1 (MQ=37) tGAAAGCTGGCGCGATCCCTGTGGGAGCGGGGGTGGGTGGCGGAAGGGGCGCGCCGCGGCCCCACGGGCGCGGCCTCATTCAGATGTTTGGTGGGGCGGGGTGGGGGCCCCA‑AGCGACCCAACGGCGCGCCCCCCCCGGGTACACCCCAg > 2:4818869/1‑150 (MQ=255) caaGCGGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GAGTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGt < 2:4086562/149‑1 (MQ=255) cgATCCCTGTGGGAGCGGCCTTGCGTCGCGAACGGGCCGCGCCGCGGCCCCAGGATCCCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGcgcg < 1:5834049/150‑1 (MQ=255) gATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCgg < 1:4929039/150‑1 (MQ=255) tgtgGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTgcg < 2:6810190/150‑1 (MQ=255) gggAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAg < 2:7210287/150‑1 (MQ=255) gggAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GAGTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAg < 2:7210194/150‑1 (MQ=255) gCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCt > 2:2888967/1‑150 (MQ=255) ggCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGc > 1:2874188/1‑150 (MQ=255) ggCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGc < 2:7156835/150‑1 (MQ=255) ccTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCGTGCGCAGCGCTGCAt > 2:165184/1‑150 (MQ=255) gCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTg < 1:6031009/150‑1 (MQ=255) cGTCGCGCAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCCGCCTGCATA‑GAGTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACCCGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCggg < 2:6707733/150‑1 (MQ=38) cGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCca < 2:1811680/98‑1 (MQ=255) gTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTggg > 1:5918632/1‑150 (MQ=255) tCGCGACAGGGCCGCGCAGCGGCCCCAGGCTCTCGGCATCCTGCATA‑GAGTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTgggg < 2:4683759/150‑1 (MQ=255) tCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCCTGCTgggg > 1:6945867/1‑150 (MQ=255) tCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTgggg > 2:5400113/1‑150 (MQ=255) tCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTgggg < 1:2211511/150‑1 (MQ=255) gcgAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGt > 2:392269/1‑150 (MQ=255) gAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTg > 1:2064714/1‑150 (MQ=255) gAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATGGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTg < 1:951445/150‑1 (MQ=255) ctggggCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGa > 2:307447/4‑150 (MQ=255) aaGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATC‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGaa < 1:2133108/150‑1 (MQ=255) cgggCCGCGCCGCGGCCCCAGGTTCTCGGCATCATGCATC‑GTTTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAg < 1:1499822/149‑1 (MQ=255) aGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAg > 1:5588503/1‑150 (MQ=255) gggCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAgg < 1:4871994/150‑1 (MQ=255) ggCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCa > 1:4139341/1‑111 (MQ=255) ggCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGt > 1:4389150/1‑150 (MQ=255) gCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTg > 1:183706/1‑144 (MQ=255) gCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTg < 2:183706/144‑1 (MQ=255) ccGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGa < 2:6391922/150‑1 (MQ=255) ccGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGa < 1:4277215/150‑1 (MQ=255) ccGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGa < 2:5588503/150‑1 (MQ=255) ccGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGa < 2:5865639/150‑1 (MQ=255) ccGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGa > 1:2559324/1‑150 (MQ=255) ccGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAACCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGa < 1:6393093/150‑1 (MQ=255) cgcgCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGAg < 1:3057734/150‑1 (MQ=255) gcgcAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCAAAGCGGccc < 1:1718896/59‑1 (MQ=37) gcgcAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCAAAGCGGccc > 2:1718896/1‑59 (MQ=37) cgcAGCGGCCCCAGGATCTCGGCATCATGCATC‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGAGGa < 1:3493551/150‑1 (MQ=255) | CGACGATAGACAGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATA‑GATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGAGGA > NC_002947/3059576‑3059871 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |