| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,324,132 | T→G | 9.4% | intergenic (‑104/+88) | treSA ← / ← PP_2919 | trehalose synthase A/LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,324,132 | 0 | T | G | 9.4% | 763.3 / 4.1 | 291 | intergenic (‑104/+88) | treSA/PP_2919 | trehalose synthase A/LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (111/130); new base G (33/4); total (149/142) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.91e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 294 total aligned reads displayed.
CGCGGTCTTCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCG > NC_002947/3323983‑3324281 | cgcgGTCTTCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCt > 2:1405535/1‑150 (MQ=255) gcgGTCTTCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTc < 1:6809348/150‑1 (MQ=255) gTCTTCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCca < 1:2389151/150‑1 (MQ=255) gTCTTCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCGTGCCCCCGcccg > 1:6415147/1‑149 (MQ=255) gTCTTCGAGCCAATTGACGTATGACGGGTCGGGCTGGGACATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCca < 1:5717911/150‑1 (MQ=255) cTTCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCcaca < 1:5815216/150‑1 (MQ=255) ttCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTTCCCGCTCCCACAg > 2:3993643/1‑150 (MQ=255) ttCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTTCCCCCGCCCACAg > 1:1265366/1‑150 (MQ=255) ttCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTTCCCCCACCcacac > 1:5160534/1‑149 (MQ=255) ttCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCCCAg > 2:5946874/1‑150 (MQ=255) aGCCATTTGACTTATGACTGGTCTTGATGGGTCAATTCGCGACCTCTTTGCGTGTCGGCACCGGCTCAGGATATGACTGCGCTGCCGCCTGAACTTTAGGCTCAAGATGGTTGTTGGTTTCTTCGCGGGCTTGCCAGATCACACAGGccc > 2:4179668/1‑148 (MQ=255) gCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGa < 1:1792036/150‑1 (MQ=255) gCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGa < 2:3250920/150‑1 (MQ=255) gCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCCCTCCCACAGGCggc > 1:6039970/1‑149 (MQ=255) tGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCCCAGGCGGACATTcc > 2:5054284/1‑150 (MQ=255) tGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATAcc < 2:6883386/150‑1 (MQ=255) aCGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGc < 1:3378560/150‑1 (MQ=255) cGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCt < 1:1036830/150‑1 (MQ=255) gTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTg > 2:4723383/1‑150 (MQ=255) gTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCGTGCCCGCTCCCACAGGCGGACAGTCCGcgg > 1:7298569/1‑148 (MQ=255) aTGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGaa < 2:1971351/150‑1 (MQ=255) aTGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGaa < 1:1499916/150‑1 (MQ=255) tGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCACGCGCCCACAGGCGGACAGACCGCGGAAg > 2:342181/1‑150 (MQ=255) gTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTgc < 2:2416286/150‑1 (MQ=255) gggCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCt < 2:2840472/150‑1 (MQ=255) gggCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCt < 2:7186757/150‑1 (MQ=255) gggCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCCCTCCCACAGGCGGCCAAACCGCGGAAGATTTgcgcg > 2:3175758/1‑149 (MQ=255) ggCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCcaca > 2:1259333/1‑121 (MQ=255) cTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCa < 1:7221898/150‑1 (MQ=255) cTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCGCCCACACGCGGACAGACCGCGGAAGGTTTGCGCTGCa > 2:1647427/1‑150 (MQ=255) tCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCtgt < 2:3460311/150‑1 (MQ=255) tCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCtgt < 1:6212173/150‑1 (MQ=255) aTTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTgg < 1:3450146/150‑1 (MQ=255) aTTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTgg < 2:5176007/150‑1 (MQ=255) tttCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGTCATACCGCTGAAGATTTGCGCTGCACCTGgggg > 2:4595823/1‑150 (MQ=255) ttCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCCCACGCGGACCAACCGCGGAAGCTTTGCGCTGCACCAGTGGGa > 2:6023922/1‑150 (MQ=255) cggtgcgcaattacttccatgatgcgtttctggcaccgcagcagttgtcggcccggcgctgatcctgcctttgcaggcccggccTCTTCGCGGGCGCGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGa > 1:1524141‑M1/85‑150 (MQ=255) tCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAg < 1:3090055/150‑1 (MQ=255) ggtgcgcaattacttccatgatgcgtttctggcaccgcagcagttgtcggcccggcgctgatcctgcctttgcaggcccggccTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAg > 2:5794720‑M1/84‑150 (MQ=255) gtgcgcaattacttccatgatgcgtttctggcaccgcagcagttgtcggcccggcgctgatcctgcctttgcaggcccggccTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGc > 2:7376382‑M1/83‑150 (MQ=255) tgcgcaattacttccatgatgcgtttctggcaccgcagcagttgtcggcccggcgctgatcctgcctttgcaggcccggccTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCg > 1:987212‑M1/82‑150 (MQ=255) tgcgcaattacttccatgatgcgtttctggcaccgcagcagttgtcggcccggcgctgatcctgcctttgcaggcccggccTCTTCGCGGGCGCGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCg > 2:4495113‑M1/82‑150 (MQ=255) cgTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCgg < 1:6422731/150‑1 (MQ=255) cgTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCgg < 2:3000581/150‑1 (MQ=255) gTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCGCCCACAGGCGGAAATTACGCAGAAGATTTGCGCGGCACCGGTGGGAGCggg > 2:2101617/1‑150 (MQ=255) tCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCCCTGCACCGGTGGGAGCGGgc > 2:6381062/1‑150 (MQ=255) ctTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCATCGCGGGCTTGCCCCCACCCACCGGCCGACATACCGCAGAAGAGATGCGCTGCACCGGTGGGACCGGgcgcgc > 2:5749125/1‑150 (MQ=255) ctTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGATCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCCCAGGCGGCCATAACGCGTAAGGATTGGGCTGCACCTGTGGGAGCGGgcgcgc > 2:4075183/1‑150 (MQ=255) ttGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACCTACCGCTGAAGATTTGCGCTGCCCCGGGGGGAGCGGGCGCGccc > 2:6703035/1‑150 (MQ=255) gCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGGTTGCCCGCGCCCCCAAGCCGACATAACGCGGAAAAATTTGGCGGGACCAGTGGGTGCGGGGCCGccccc > 1:4639427/1‑148 (MQ=255) gCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCGTGCCCGCGCCCCCAGGCGGCCATACCGCGGCAGAGGTGCGCGGCCCCGGGGGGCGCGGGCGCGCCcgc > 2:6437670/1‑150 (MQ=255) gtgtCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCATGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAATATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCcgctc < 1:5413159/150‑3 (MQ=255) tgtCGGCACCGGCTCAGGTTAGGACGGCGCTGCGGCCTGACCGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGaa < 2:5632022/150‑1 (MQ=255) tCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAaga < 2:3710601/150‑1 (MQ=255) ggCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTTGGCGCGCCCGAAGGCGGGCAGAGCGCGGAATTTTTTGGGTGCAGCAGTGGGGGCGGGGGGGGCCGCGAAGAgg > 1:396788/1‑150 (MQ=255) ggCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCGGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAgg > 2:7247359/1‑150 (MQ=255) gCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGc < 1:2967367/150‑1 (MQ=255) gCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCGCCCACAGGCGGACATACCGCAGAAGATTTGCGCTGCACCAGTGGGAGCGGGCGCGCCCGCGCAGAGGc > 2:2562194/1‑150 (MQ=255) gCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCATTCCCGCTCCCCCAGGCGGGCAAACCGCGGTAGGTTTGCGGGGCACCAGTGGGAGCGGGCGCGCCCGCGAAGGGGc > 2:2555041/1‑150 (MQ=255) gCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGGTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGTCATTCCGCTGAAGTTTTGGGCGGCGCCAGTGGGAGCGGGCGCGCCCCCGAAGTGGc > 2:6606306/1‑150 (MQ=255) cACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCCCTCCCCCCGGCGGACATACCGCGGAAGATTTGCGCTGCACCAGTGGGCGCGGGCGCGCCCGCGAACAGGcc > 2:2668612/1‑150 (MQ=255) ccGGCTCTGGTTTTGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTTTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCGGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCgg < 2:6945993/150‑1 (MQ=255) ttttGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGCTGGGTGTTGGTTTCTTCGCGGGCTGGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGCGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAg < 1:4285063/147‑1 (MQ=255) gcgcTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCGGACGTTTTGCGCGGCACCGGGGGGAGCGGGCGCGCCCGCGCAGCGGCCGGGCCTGCACAGCCTGGATc > 2:6056113/1‑150 (MQ=255) cTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAgc < 1:1143712/150‑1 (MQ=255) tGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCGCCCCCACGCCGACATGCCGCGGAAGGTTTGCGGTGCACCAGGGGGAGCGGGCGCGCCCGCGGAGAGGCCGGGCCGGCCAAGGCAGGATCAgcg > 2:1110284/1‑150 (MQ=255) cTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGc < 2:4829460/150‑1 (MQ=255) tGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCGTTCCCGCTCCCACAGGCGGACATAACCCTGAAGATTTTCGCTGCACCGGTGGGAGCGGGCGCGCCCGCGCAGAGGCCGGGCCAGCAAAGGCACGATAAGCGCCCGGcc > 2:1255244/1‑150 (MQ=38) aaCGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAGGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGa < 1:3622382/150‑1 (MQ=255) ttCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCGCCCACAGGCGGCCATCCCGCGGAAGAGTTGCGCTGCACCAGTGGGAGCGGGCGCGCCCGCGCACACGCCGGGCCAGCCAACGCAGGATCACCGCCCGGCCGCCAAc > 2:7132291/1‑150 (MQ=255) cGGCTCACGTGGGGTGTTGGTTTCTGCGCGGGGTGCCCCGCCCCCACTGGCGGACTCCCCGCTGACGTTTGGCGCGGCACGGGTGGGCGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAActg < 1:67004/150‑1 (MQ=255) tCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACtgctgc < 2:3590441/150‑1 (MQ=255) agtggggTGGTGGTTTCTTCGCGGGCTGGCCCGCCCCCACAGGCGGACATCCCGCTTAAGATTGGCGCGGCACCTGTGGGCGGGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGt < 1:5935175/146‑1 (MQ=255) gggTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCa < 2:4031202/150‑1 (MQ=255) gggTGTTGGTTTCTTCGCGGGCTTGCCCCCTCCCACACGCCGACATACCCCTGAAGATTTGCGCTGCACCAGGGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCAGCCAACGCAGGATCAGCGCCGGGCCCACAACTGCTGCGGGGCCa > 2:5894030/1‑150 (MQ=255) tgtTGGTTTCTTCGCGGGCTTGCCCCCGCCCACAGGCCGACATGCCGCAGAATTTTTGCGCTGCACCTTTGGGAGCGGGCGCGCCCGCGCAGACGCCGGGCAAGCAAAGGCAGGATCAGCGCCCCGCCGACAACACCAGCCCTGCCAGaa > 2:5548157/1‑150 (MQ=255) ttGGTTTCTTCGCGGGCTTTCCCGCTCCCACACGCGGACCAACCCCGGAAGATTTGCGCAGCAACAGTGGGAGCGGGCGCGCCCCCGAAGAGGCCGGGCCAGCAAACGCAGGATCACCGCCCGGCCGACAACTCCAGCGGTGCCAGAAAc > 2:3892353/1‑150 (MQ=255) ttGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCGGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCACGATCACCGCCCGGCCGACAACAGCAGCGGGGCCACAAAc > 2:5292934/1‑150 (MQ=38) tGGTTTCTTCGCGGGCTTGCCCGCTCCCACCGGCGGACATACCGCTGAAGATTTGCGCGGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACg < 2:153088/150‑1 (MQ=255) gTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGGGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGca < 1:3993535/150‑1 (MQ=255) gTTTCTTCGCGGGCTTGCCCCCGCCCCCAGCCCGACATACCGCCCAAGGGTTGCGCGGCACCAGGGGGTGCGGGCCCGCCCCCCGACCCGCCCGGCCCGCCAAGCCACGATCCCCGCCCGGCCGACAACCGCACCCCAGCCACAAACGca > 2:4268490/1‑150 (MQ=255) ttcttcGGGGGCGTGCCCGCTCCCACTGGCGGACATACCGCTTAAGATTTGCGCGGCACGTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGcatc < 1:4737937/150‑1 (MQ=255) TCTTCGCGGGCTTGCCCGCTCCCCCAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGGGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGcatca > 2:6473754‑M1/1‑150 (MQ=255) TCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATCCCGCTGAAGATTTGCGCGGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGcatca > 2:683520‑M1/1‑150 (MQ=255) ggGGGGTTGCCCGCTCCCACTGGGGTACATACCGCTGAAGTTTTGCGCTGCACGTGTGGGCGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGaa > 1:1405535‑M1/3‑150 (MQ=255) GCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGaa < 2:5257020‑M1/150‑1 (MQ=255) GCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGaa < 2:838143‑M1/150‑1 (MQ=255) GCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGaa > 2:6236810‑M1/1‑150 (MQ=255) GCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGCGCCGACAACTGCTGCGGTGCCAGAAACGCATCAAGGaa < 1:4147791‑M1/150‑1 (MQ=255) GCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCAGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCAAGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTCCGGAGCCAGAAACGCCTCAGGGaa < 2:4872452‑M1/150‑1 (MQ=255) ttGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAAtt > 2:3360369/1‑150 (MQ=255) ggCCCGCGCCCACCGGCGGACACACCGCTGAAGATTTGCGCGGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTg < 1:5764139/149‑1 (MQ=255) cccGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGACGTAATTgcg > 2:1621515/1‑150 (MQ=255) cccGCGCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTgcg < 1:5069526/150‑1 (MQ=255) cGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTgcgcc > 1:6240319/1‑149 (MQ=255) cGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGAGCCAGAAACGCATCATGGAAGTAATTGCGCa > 1:2490637/1‑150 (MQ=255) gCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAaga > 2:2781265/1‑68 (MQ=255) gCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAaga < 1:2781265/68‑1 (MQ=255) gCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCAc > 1:3845602/1‑150 (MQ=255) tCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCg > 1:4450946/1‑150 (MQ=255) | CGCGGTCTTCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCG > NC_002947/3323983‑3324281 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |