| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,324,166 | T→G | 10.8% | intergenic (‑138/+54) | treSA ← / ← PP_2919 | trehalose synthase A/LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,324,166 | 0 | T | G | 10.8% | 662.2 / 7.0 | 281 | intergenic (‑138/+54) | treSA/PP_2919 | trehalose synthase A/LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (131/105); new base G (19/20); total (154/127) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.89e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 286 total aligned reads displayed.
GGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTG > NC_002947/3324017‑3324315 | gggCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCt < 2:7186757/150‑1 (MQ=255)gggCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCt < 1:4890490/150‑1 (MQ=255) ggCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTg < 2:6427861/150‑1 (MQ=255) cTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCa < 1:7221899/150‑1 (MQ=255) tGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCCCTCCCAC‑AGGCCGACATACCGCGGAAGATTTTCGCTGCAc > 2:646823/1‑150 (MQ=255) ggTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCt < 1:2816815/150‑1 (MQ=255) gTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGGCCATACCGCGGAAGATTTGCGCTGCAccgg > 2:6641201/1‑148 (MQ=255) gTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCtg < 2:2586570/150‑1 (MQ=255) tCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGGCCATACCGCGGAAGATTTGCGCTGccccagg > 2:1550991/1‑147 (MQ=255) tCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCtgt < 1:6212173/150‑1 (MQ=255) tCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCtgt < 2:3460311/150‑1 (MQ=255) cATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCtgtg < 2:7056200/150‑1 (MQ=255) cATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCtgtg < 2:3043981/150‑1 (MQ=255) tttCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGGACAAACCGCTGAAGATTTGCGCAGCACCAGTggg > 2:2329607/1‑150 (MQ=255) ttCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGa < 2:4711866/150‑1 (MQ=255) ttCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGa < 2:5288457/150‑1 (MQ=255) ttCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCGGAAGAGTTGCGCTGCACCTGGGGGa > 2:6024001/1‑150 (MQ=255) cggtgcgcaattacttccatgatgcgtttctggcaccgcagcagttgtcggcccggcgctgatcctgcctttgcaggcccggccTCTTCGCGGGCGCGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGa > 1:1524024‑M1/85‑150 (MQ=255) ggtgcgcaattacttccatgatgcgtttctggcaccgcagcagttgtcggcccggcgctgatcctgcctttgcaggcccggccTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAg > 2:5794720‑M1/84‑150 (MQ=255) gtgcgcaattacttccatgatgcgtttctggcaccgcagcagttgtcggcccggcgctgatcctgcctttgcaggcccggccTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGc > 2:7376382‑M1/83‑150 (MQ=255) tCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCCCTGCACCGGTGGGAGCGGgc > 2:6381062/1‑150 (MQ=255) caattacttccatgatgcgtttctggcaccgcagcagttgtcggcccggcgctgatcctgcctttgcaggcccggccTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGa > 2:5893230‑M1/78‑143 (MQ=255) caattacttccatgatgcgtttctggcaccgcagcagttgtcggcccggcgctgatcctgcctttgcaggcccggccTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGa < 1:5893230‑M1/66‑1 (MQ=255) ctctTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGgcgc < 2:5072622/150‑1 (MQ=255) ctTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGATCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCCC‑AGGCGGCCATAACGCGTAAGGATTGGGCTGCACCTGTGGGAGCGGgcgcgc > 2:4075183/1‑150 (MQ=255) tttGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGGTTTCCCCCGCCCACAACCCGCACA‑ACCGCAGAAAATATAAGCTGCACCAGAGGGAGCagggcccac > 1:6372052/1‑144 (MQ=255) gCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGGTTGCCCGCGCCCCC‑AAGCCGACATAACGCGGAAAAATTTGGCGGGACCAGTGGGTGCGGGGCCGccccc > 1:4639427/1‑148 (MQ=255) gtgtCGGCACCGGCTCTGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCAC‑CGGCGGACATACCGCTGAATATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGa < 1:6443797/150‑1 (MQ=255) gtgtCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCGGTGGGAGCGGGCGCGCCCGCGa > 2:1636540/1‑150 (MQ=255) tgtCGGCACCGGCTCAGGTTAGGACGGCGCTGCGGCCTGACCGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGaa < 2:5632022/150‑1 (MQ=255) gtCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGTTGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAag < 2:2808073/150‑1 (MQ=255) tCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAaga < 2:3710601/150‑1 (MQ=255) tCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCGGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAaga > 2:5008531/1‑150 (MQ=255) ggCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTTGGCGCGCCCGA‑AGGCGGGCAGAGCGCGGAATTTTTTGGGTGCAGCAGTGGGGGCGGGGGGGGCCGCGAAGAgg > 1:396788/1‑150 (MQ=255) gCACGGGCTCTGTTTTTGCGGGCGCTGGGGCCTGAAGTTTCGGCTCAAGTTGGGTTTTGGTTTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGTACATACCGCTTATTTTTTGCGCTGCACGTGGGGGAGGGGGCGCGCCCGCGAAGAGGc < 1:4470950/150‑1 (MQ=255) gCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCGCCCAC‑AGGCGGTCATACCGCGGAAGTGTTGCGCTGCACCGGTGGGAGCGGGCGCGCCCGCGCAGAGGc > 2:2561836/1‑150 (MQ=255) gACGGCGCTGCGGCGTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAg < 2:4181125/150‑1 (MQ=255) aCGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTTCCCGCTCCCAC‑AGGCGGGCAAACCCCTGAAGATTTGCGCTGCACCAGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCAGCAAAGGCCgg > 2:2728232/1‑150 (MQ=39) ggCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGAt > 2:7288444/1‑150 (MQ=255) gcTGCGGCCTGAACGTTCGGCTCAAGATGTGTGTGGGTTTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGGACAGACCGCTGAAGATTTGCGCGGCACCTGTGGGAGGGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAg < 2:6860019/150‑1 (MQ=39) cTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAgc < 1:1143712/150‑1 (MQ=255) tGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCGCCCCC‑ACGCCGACATGCCGCGGAAGGTTTGCGGTGCACCAGGGGGAGCGGGCGCGCCCGCGGAGAGGCCGGGCCGGCCAAGGCAGGATCAgcg > 2:1110284/1‑150 (MQ=255) cTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTTCCCGCACCCAC‑AGGCGGACAAACCGCTGAATATTTGCGCTGCACCAGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCAGCAAAGGCAGGATCAGCGCCCGGc > 2:3882997/1‑150 (MQ=255) tGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCGTTCCCGCTCCCAC‑AGGCGGACATAACCCTGAAGATTTTCGCTGCACCGGTGGGAGCGGGCGCGCCCGCGCAGAGGCCGGGCCAGCAAAGGCACGATAAGCGCCCGGcc > 2:1255244/1‑150 (MQ=38) aaCGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAGGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGa < 1:3622382/150‑1 (MQ=255) gTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCGCCCAC‑ACGCCGACAAACCCCGGAAGATTTTCGCTGCACCGGTGGGAGCGGGCGCGCCCGCGCACACGCCCGGCCAGCCAAGGCCCGATAACCGCCCGGcccgcaa > 2:187509/1‑145 (MQ=255) tCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCGTGCCCGCGCCCAC‑AGGCGGGCATAACGCGGAAGATTTTGGCTGCACCTGGGGGTGCGGGCGCGCCCGCGGAGAGGGCCGGCCGGGCAAGGCAGGCTGAGCGCCCGGCCCGCAAca > 2:2068722/1‑149 (MQ=255) cTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCCCGCCCAC‑AGGCGGACCTACCGCGGAAGATTTGCGCTGCACCGGTGGGAGCGGGCGCGCCCGCGCAGAGGCCGGGCCAGCAAAGGCAGGATCAGCGCCGGGCCGACAActgctg > 2:4434239/1‑150 (MQ=255) tCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACtgctgc < 2:3590441/150‑1 (MQ=255) tCAAGATGGGTGTTGGTTTCTTCGCGGGCTGGCCCGCTCCCAC‑CGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACtgctgc < 2:5931672/150‑1 (MQ=255) aGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCACCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGt < 1:5935506/150‑1 (MQ=255) aGATGGGTGTTGGTTACTACGCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCCGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGt < 2:5254268/150‑1 (MQ=255) gggTGTTGGTTTCTTGGGGGGCTTGCCCGCCCCCAC‑TGGGGGAAATCCCGCTTAATTTTGGCGCTCCCCGTGGGGGCGGGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCa < 1:1317728/150‑1 (MQ=255) gggTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCa < 2:4031202/150‑1 (MQ=255) tgtTGGTTTCTTCGCGGGCTTGCCCCCGCCCAC‑AGGCCGACATGCCGCAGAATTTTTGCGCTGCACCTTTGGGAGCGGGCGCGCCCGCGCAGACGCCGGGCAAGCAAAGGCAGGATCAGCGCCCCGCCGACAACACCAGCCCTGCCAGaa > 2:5548157/1‑150 (MQ=255) ttGGTTTCTTCGCGGGCTTTCCCCCGCCCAC‑AGGCGGCCAAACCCCGGAAGAATTTCGCGGCACCAGTGGGAGAGGGCGCGCCCCCGAACACGCCGGGCCTGCAAAGGCCGGATCAGCGGCCGGCCCACAAAAGCTGCGGTGCCACAAAc > 2:3295201/1‑150 (MQ=255) ttGGTTTCTTCGCGGGCTTGCCCGCGCCCAC‑AGGCGGACCTTCCCCGGAAGCTTTTCGCTGCACCAGGGGGTGCGGGCCGGCCCCCGCAGAGGCCGGGCCAGCAAAGGCAGGATCACCGCCCGGCCCACAACAGCAGCGGTGCCCGAAAc > 2:3244130/1‑150 (MQ=255) gTTTCTGCGCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACGTGTGGGCGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGca < 1:3993643/150‑1 (MQ=255) TCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGcatca > 2:4855906‑M1/1‑150 (MQ=255) gtgggGGGCTGGCCCGCTCCCAC‑CGGGGGACATACCGGTGATTTTTTGCGGTGCACGTGGGGGTGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATg > 1:950368‑M1/6‑150 (MQ=255) gaGCGGGCAAGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATgg < 1:3232859‑M1/148‑1 (MQ=255) GCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGaa < 2:838143‑M1/150‑1 (MQ=255) GCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGaa > 2:6921192‑M1/1‑150 (MQ=255) GCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGaa > 2:6236810‑M1/1‑150 (MQ=255) GCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGaa > 1:4198121‑M1/1‑150 (MQ=255) GCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGaa > 1:4722643‑M1/1‑150 (MQ=255) GCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGaa > 2:4538862‑M1/1‑150 (MQ=255) cgccccccccGCACCCAC‑ACCCGCACATACCGCTGAAGATTTCCGCGCCACCTCTGGCAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGt < 2:1463222/143‑1 (MQ=255) GCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTaa > 2:5160534‑M1/1‑150 (MQ=255) ttGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCGGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAAtt < 2:1265366/150‑1 (MQ=255) ggCCCGCGCCCAC‑CGGCGGACACACCGCTGAAGATTTGCGCGGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTg < 1:5764139/149‑1 (MQ=255) cccGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAAATgcg > 2:1034962/1‑150 (MQ=255) ccGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACaa < 1:3402916/110‑1 (MQ=255) ccGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACaa > 2:3402916/1‑110 (MQ=255) ccGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTgcgc > 2:2973373/1‑150 (MQ=255) cGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGAGCCAGAAACGCATCATGGAAGTAATTGCGCa > 1:2490637/1‑150 (MQ=255) gCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCAc > 1:3845602/1‑150 (MQ=255) tCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCg > 1:3065267/1‑150 (MQ=255) cac‑aGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCt > 1:591870/1‑150 (MQ=255) ac‑aGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTg > 1:2087208/1‑150 (MQ=255) ac‑aGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTg > 1:4052922/1‑150 (MQ=255) ctggCGTAAATACCGCTTATTTTTTGCGCGGCACGTGGGGGAGGGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGc < 1:54039/148‑1 (MQ=255) ggCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCAt < 2:929986/150‑1 (MQ=255) gCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATc > 2:6560119/1‑150 (MQ=255) gCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATc > 1:272283/1‑150 (MQ=255) gACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGcc > 1:1933322/1‑150 (MQ=255) aCCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCt > 1:6986549/1‑150 (MQ=255) aCCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCt > 1:4074229/1‑150 (MQ=255) gCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGaa > 1:4396249/1‑150 (MQ=255) cTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAAt > 2:6769154/1‑150 (MQ=255) tGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATg < 2:6290192/112‑1 (MQ=255) tGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATg > 1:6290159/1‑112 (MQ=255) aaGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGcc > 1:2385162/1‑150 (MQ=255) aaGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGcc > 1:6553114/1‑150 (MQ=255) aGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGccc < 2:6060921/150‑1 (MQ=255) aGATTTGCGCGGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGccc < 2:3987461/150‑1 (MQ=255) gcTGCACCTGTGGGTGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCgg < 1:1789986/150‑1 (MQ=255) gcTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCgg > 2:6401605/1‑150 (MQ=255) cTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGt < 2:5663205/150‑1 (MQ=255) tGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTg < 1:6703035/150‑1 (MQ=255) | GGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTG > NC_002947/3324017‑3324315 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |