| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,344,159 | T→A | 10.2% | intergenic (‑169/+74) | PP_2935 ← / ← ybiT | membrane protein/ABC‑F family ATPase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,344,159 | 0 | T | A | 10.2% | 714.6 / 26.8 | 261 | intergenic (‑169/+74) | PP_2935/ybiT | membrane protein/ABC‑F family ATPase |
| Reads supporting (aligned to +/- strand): ref base T (132/94); new base A (25/6); total (157/104) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.84e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 272 total aligned reads displayed.
CGGTTGGGCGTGGTCCCATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑CCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGC > NC_002947/3344010‑3344308 | gTTGGGCGTGGTCCCATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCtgt < 2:2980613/150‑1 (MQ=255) ttGGGCGTGGTCCCATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCtgtg < 2:1826780/150‑1 (MQ=255) ttGGGCGTGGTCCCATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCtgtg < 2:1682432/150‑1 (MQ=255) ggCGTGGTCCCATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCGTTCCCGCGCTACCCAGGCCCCACAAACGTCCCATACCATTGCgg > 1:2804341/1‑150 (MQ=255) gCGTGGTCCCATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCAGTGCGGt > 1:6139445/1‑150 (MQ=255) gCGTGGTCCCATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCGTGCCCGCGCTAACGAGGGCCCCCAAGCGTGCAATACCATTGCggg > 1:4695261/1‑149 (MQ=255) ttcagcggtacctacgatgactacctgcgtagccagggtgtgctggtctgattgatgggacggcctggccatctcggatggccgggcCTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCtg > 1:4962930‑M1/88‑150 (MQ=255) ccATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTgg < 2:6896612/150‑1 (MQ=255) ccATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCAATACCAACGCCCCACAAGCGACCAATAACAGTGCCGTCCCAGTgg > 2:1964902/1‑150 (MQ=255) ccATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCAGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTgg < 1:3524719/150‑1 (MQ=255) agcggtacctacgatgactacctgcgtagccagggtgtgctggtctgattgatgggacggcctggccatctcggatggccgggcCTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTgg > 2:6786378‑M1/85‑150 (MQ=255) tGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGgagcgg > 2:2329656‑M2/1‑144 (MQ=255) tGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGgagcgg > 1:6733490‑M2/1‑144 (MQ=255) tGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGgagcgg > 1:3679617‑M2/1‑144 (MQ=255) ggCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGgagcggg > 1:6709680‑M2/1‑143 (MQ=255) ccGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGgagcgggca > 1:6664533‑M2/1‑141 (MQ=255) cGTTGCGCGAAGGAACAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGgagcgggcaa > 1:5688305‑M2/1‑140 (MQ=255) cGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGgagcgggcaa > 1:1215643‑M2/1‑140 (MQ=255) cGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGgagcgggcaa > 1:2999275‑M2/1‑140 (MQ=255) cgatgactacctgcgtagccagggtgtgctggtctgattgatgggacggcctggccatctcggatggccgggcCTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAg > 2:3410359‑M1/74‑150 (MQ=255) ttGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCGTGGCCCCGCACCCACGGCCCCACAACCGGCCCAAACCAGTGCGGTCCCCGTGGgggcgggccacc < 1:1847265‑M2/150‑13 (MQ=255) gactacctgcgtagccagggtgtgctggtctgattgatgggacggcctggccatctcggatggccgggcCTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCaa > 1:1566020‑M1/70‑145 (MQ=255) gcgAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCCCAAGCGTCCAAAACCTGTGCGGTCCCTGTGGgagcgggccagcccgc < 1:6008739‑M2/150‑17 (MQ=255) gAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGgagcgggcaagcccgcga < 2:1734326‑M2/150‑19 (MQ=255) gAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCGTTCCCCCGCAACCAACGCCCCACCAACCTCCAAAAACAGTGCGGTACCAGTGGGTGCGGGCACGcccccca > 1:1009873/1‑146 (MQ=255) cagGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTGGCCCGCTCTCCCACGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGgagcgggcaagcccgcgaa > 2:3896363‑M2/2‑131 (MQ=255) aaGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGgagcgggcaagcccgcgaa > 2:2021357‑M2/1‑131 (MQ=255) ggAAAAGACAGCAGGCTAACGAATTATTCGTCTGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGgagcgggcaagcccgcgaaga > 2:6925853‑M2/1‑129 (MQ=255) ggAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGgagcgggcaagcccgcgaaga < 1:7396212‑M2/150‑22 (MQ=255) gAAAAGACAGCAGGCTAACTATTTTTTGGTCGGGCCGTGCCGGTGGGTGGGATGGGGATGTACTCTGCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGGGGgagcgggcaagcccgcgaagag > 1:6533506‑M2/1‑128 (MQ=255) gAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGgagcgggcaagcccgcgaagag < 2:1185875‑M2/150‑23 (MQ=255) aaaaGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTgg > 2:4503635/1‑127 (MQ=255) aaaaGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTgg < 1:4503776/127‑1 (MQ=255) aaaGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGc < 2:2359176/150‑1 (MQ=255) aaaGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAAAAACAGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGc > 1:6073173/1‑150 (MQ=255) gACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCt < 2:3569625/108‑1 (MQ=255) cagGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCCCTCTCCCAAGGCCCCACAAGCGTCCCAAACCAGTGCGGTCCCAGTGGGAGCGGGCCAGCCCCCGAACAGGCCCGGCCaa > 1:2326069/1‑149 (MQ=255) ggCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATcc < 2:1212230/150‑1 (MQ=255) ggCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCGCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCGGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCCGcccacc > 2:1632893/1‑146 (MQ=255) cTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCCCTCTCCCAAGGCCCCACAAGCGTCCAAAACCTGTGCGGTACCAGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCaaacga > 1:2397195/1‑145 (MQ=39) tAACGAATTATTCGTCGGGCCGTGCCGGTGGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCGGTGCGGTCCCTGTGGTAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCgag < 2:705453/150‑1 (MQ=255) cGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATg < 2:4722665/150‑1 (MQ=255) cGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCACACCCAAGGCCCCACAAGCGTCCAATACCAGTGCGGTCCCGGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCAACCgagaag > 1:2354545/1‑148 (MQ=255) cGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCCCGCTCCCAAGGCCCCACAAGCGTCCAAAAACAGTGCGGTCCCAGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATg > 1:3074099/1‑150 (MQ=255) tattCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATCCCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCTGGCCATCTCGGATGGccga < 2:2198347/150‑3 (MQ=39) ttCGTCGGGCGGTGCCGGTCGGTGGGATGGGTTTGTACTCTTCGCGGGCTTGCCCGCTCACCCACGCCCCCACACGCGTCCAATACCTGTGCGGTCCCTGGGGGAGCGGGCACGCCCGCGAAGAGGCCTGGCCATCTCGGATGGCCGGGc < 1:52624/150‑1 (MQ=255) ggCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCCCACACCCAAGGCCCCACAAGCGTCCAAAACCTGTGCGGTCCCGGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCa > 1:4217458/1‑150 (MQ=39) gTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGGCCAAAAACAGTGCGGTCCCCGTGGGGGCGGGCAAGCCCCCGAAGAGGCCCGGCCCACCCAGAAGGCCCCGCCGGccccacaa > 1:5381511/1‑145 (MQ=255) tGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCatcaat > 2:6201271/1‑150 (MQ=255) ggtcggtGGGTTGGTTATTTACCCTTCGCGGGCTGGCCCGCACTCCCACGCCCCCAAATGCGACAAAGACCTGGGCGGTCCGGGTGGGCGCGGCAACCCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGa < 1:3863087/150‑1 (MQ=255) ggtcggtGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCACGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGa < 1:6821259/150‑1 (MQ=255) ggtcggtGGGATGGGGATGTACTCTTCGCGGGCGTGCCCGCACTACCAAGGCCCCACAAGCGTCCAATAACAGTGCGGTCCCTGTGGGAGCGGGCAAGCCCCCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCAGCAATAAGa > 2:2769313/1‑150 (MQ=255) tGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCGGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGca > 2:7347743/1‑150 (MQ=255) gatggggatgTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCGGTGGGGGCCGGCAACCCCCCGAAGAGGCCCGGCCCACCGAGATGGCCAGGCCCTCCCATCAATCAGACCAGCaca‑c > 2:4656032/1‑150 (MQ=255) gggttgTACTCTTCGCGGGCTTGCCCGCTCTCCCATGGCCCCACAAGCTCCAAATCCCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCGGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑CCCTg < 1:2909142/150‑1 (MQ=38) TCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAAAACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑CCCTGGCTACGCAg < 2:5841869‑M1/150‑1 (MQ=255) TCTCCGCGGGCTGGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGACGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑CCCTGGCTACGCAg > 1:6110578‑M1/1‑150 (MQ=255) CTTCGCGGGCGTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑CCCTGGCTACGCAgg > 2:5470715‑M1/1‑150 (MQ=255) gCGCGGGGTTGCCCGCTCCCCCAAGCCCCCAAACGCGTCCAAGACCTGGGCGGTCCCTGTGGGCGCGGGCACGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑CCCTGGCTACGCAGGTa > 1:2207280‑M1/2‑150 (MQ=255) TCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑CCCTGGCTACGCAGGTa > 2:3074099‑M1/1‑150 (MQ=255) CGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑CCCTGGCTACGCAGGTAGTc < 2:2534414‑M1/150‑1 (MQ=255) GGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑CCCTGGCTACGCAGGTAGTCa > 2:2621448‑M1/1‑150 (MQ=255) CTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑cc > 2:5102058‑M1/1‑128 (MQ=255) CTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑cc < 1:5102058‑M1/128‑1 (MQ=255) TTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑CCCTGGCTACGCAGGTAGTCATCGt < 1:1477560‑M1/150‑1 (MQ=255) TTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑CCCTGGCTACGCAGGTAGTCATCGt < 2:2693034‑M1/150‑1 (MQ=255) ggcccgcccCCCAACGCCCCCACACGCGGCCAATCCCTGGGGGGCCCGTGGGGGCGGGGGCACGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑CCCTGGCTACGCAGGTAGTCATCGTa < 1:1461863/149‑1 (MQ=255) gGCCCGCTCTCCCACGGCCCCCCACGCGTCCAATCCCTGTGGGGTCCGTGGGGGAGCGGGCACGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑CCCTGGCTACGCAGGTAGTCATCGTa > 2:5600673‑M1/2‑150 (MQ=255) TGCCCGCTCACCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑CCCTGGCTACGCAGGTAGTCATCGTa > 2:149197‑M1/1‑150 (MQ=255) gCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGgagcgggcaagcccgcgaagagtacatccccatcccaccgaccggcacggcccgacgaataattcgttagcctgctgtcttttccttcgcgcaacggc < 2:165199‑M2/150‑99 (MQ=255) CCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGaa > 2:4860242‑M1/1‑70 (MQ=255) CCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑CCCTGGCTACGCAGGTAGTCATCGTAgg < 2:3303586‑M1/150‑1 (MQ=255) ccGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGgagcgggcaagcccgcgaagagtacatccccatcccaccgaccggcacggcccgacgaataattcgttagcctgctgtcttttccttcgcgcaacggcca < 1:5844501‑M2/150‑101 (MQ=255) ccGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGgagcgggcaagcccgcgaagagtacatccccatcccaccgaccggcacggcccgacgaataattcgttagcctgctgtcttttccttcgcgcaacggcca < 1:6786616‑M2/150‑101 (MQ=255) ccGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGgagcgggcaagcccgcgaagagtacatccccatcccaccgaccggcacggcccgacgaataattcgttagcctgctgtcttttccttcgcgcaac > 2:4384332‑M2/1‑50 (MQ=255) cGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGgagcgggcaagcccgcgaagagtacatccccatcccaccgaccggcacggcccgacgaataattc > 2:6004645‑M2/1‑49 (MQ=255) CGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑CCCTGGCTACGCAGGTAGTCATCGTAGGTa < 1:5557466‑M1/150‑1 (MQ=255) GCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCTGGCCATCTCGGATggccgg < 1:4400249‑M1/93‑3 (MQ=255) tcCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑CCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCt > 1:7116032/1‑150 (MQ=255) tcCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑CCCTGGCTACGCAGGGAGTCATCGGAGGTACCGCt > 2:5718277/1‑150 (MQ=255) cAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑CCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGaa > 2:3579455/1‑150 (MQ=255) cAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑CCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGaa < 2:3760647/150‑1 (MQ=255) cAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑CCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGaa > 2:660574/1‑150 (MQ=255) aaGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGAAGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑CCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAg > 2:945583/1‑150 (MQ=255) ccacacaAGCGTCCAATCCCTGTGCTGTCCGTGTGGGAGCGGTCATGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑CCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTcca < 1:5035723/147‑1 (MQ=255) cccACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑CCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTccac < 2:4975429/150‑1 (MQ=255) cccACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑CCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTccac > 1:4975429/1‑150 (MQ=255) cccACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑CCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTccac > 1:4312034/1‑150 (MQ=255) ccACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTccac > 2:2092059/1‑150 (MQ=255) ccACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑CCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTccacc > 1:5360606/1‑150 (MQ=255) cacaAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑CCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTccacca < 1:1151136/150‑1 (MQ=255) aaGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑CCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCcaccacac < 2:5273417/150‑1 (MQ=255) aaGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑CCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCcaccacac < 2:6036660/150‑1 (MQ=255) gTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAgg < 2:6495061/72‑1 (MQ=255) tCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCCGGCCGTCCCATCAATCAGACCAGCACA‑CCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCg > 1:815024/1‑150 (MQ=255) tCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑CCCTGGCTACGCAGGTattgga < 2:813897/118‑6 (MQ=255) tCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑CCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCg > 1:7036390/1‑150 (MQ=255) aaTACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑CCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGcc > 2:5750783/1‑150 (MQ=255) aaTACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑CCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGcc > 1:1693008/1‑150 (MQ=255) aCCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑CCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGAc > 1:93072/1‑150 (MQ=255) | CGGTTGGGCGTGGTCCCATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGGCCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACA‑CCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGC > NC_002947/3344010‑3344308 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |