| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,583,420 | T→A | 12.1% | intergenic (+105/‑219) | PP_3158 → / → PP_5589 | hypothetical protein/rhs repeat‑associated core domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,583,420 | 0 | T | A | 12.1% | 709.9 / 38.8 | 281 | intergenic (+105/‑219) | PP_3158/PP_5589 | hypothetical protein/rhs repeat‑associated core domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base T (118/121); new base A (36/3); total (157/124) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.35e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 303 total aligned reads displayed.
CGCGCAGAGCCTGTTGCTGATGAACTTCCTGCCGGTGCAGTAAGAGGCCTCTGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAAGGTCATTAATCGTGAAACGTTCGCAAGCGTACACGCCCTACGGCGCTATTTGGGGTGATGGCCATTGCTCCGTGTTGAAGTACAATGGT > NC_002947/3583273‑3583569 | cgcgCAGAGCCTGTTGCTGATGAACTTCCTGCCGGTGCAGTAAGAGGCCTCTGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCAttt < 2:6090181/150‑1 (MQ=255) gcgcAGAGCCTGTTGCTGATGAACTTCCTGCCGGTGCAGTAAGAGGCCTCTGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCAtttt < 1:7001919/150‑1 (MQ=255) gcgcAGAGCCTGTTGCTGATGAACTTCCTGCCGGTGCAGTAAGAGGCCTCTGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACAGGGAtttt > 1:4373817/1‑150 (MQ=255) cgcAGAGCCTGTTGCTGATGAACTTCCTGCCGGTGCAGTAAGAGGCCTCTGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCAttttt < 2:5116269/150‑1 (MQ=255) cgcAGAGCCTGTTGCTGATGAACTTCCTGCCGGTGCAGTAAGAGGCCTCTGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCAttttt < 1:2359984/150‑1 (MQ=255) cgcAGAGCCTGTTGCTGATGAACTTCCTGCCGGTGCAGTAAGAGGCCTCTGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCAttttt < 2:1413845/150‑1 (MQ=255) ccTGTTGCTGATGAACTTCCTGCCGGTGCAGTAAGAGGCCTCTGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCAAAAATGCCAGtt < 1:2728122/150‑1 (MQ=255) cTGTTGCTGATGAACTTCCTGCCGGTGCAGTAAGAGGCCTCTGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCAAAAATGCCAGTTg < 2:2693968/150‑1 (MQ=255) gTTGCTGATGAACTTCCTGCCGGTGCAGTAAGAGGCCTCTGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCATTTTTGCCAGTTGCa < 2:6463865/150‑1 (MQ=255) tgatgaACTTCCTGCCGGTGCAGTAAGAGGCCTCTGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACAGGCATTTTTGCCAGTTGCAGCGAg > 2:4862317/1‑150 (MQ=255) gatgaACTTCCTGCCGGTGCAGTAAGAGGCCTCTGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGGATTTTTTGCCGTTGCAGCGAgt > 2:5228418/1‑150 (MQ=255) atgaACTTCCTGCCGGTGCAGTAAGAGGCCTCTGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCATTTTTGCCAGTTGCAGCGAgtg > 2:5406934/1‑150 (MQ=255) atgaACTTCCTGCCGGTGCAGTAAGAGGCCTCTGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAAATTGCATTTTTTCGAGTTTCAGCGAgtt > 2:3339312/1‑149 (MQ=255) tgaACTTCCTGCCGGTGCAGTACGAGGCCTCTGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGCGGTTTGTGTTGATGAGTGTTCTTGCGCGAATCAAGGTTTGGTCGGGCTGCAACTGGAATTTTTGCCAGTTGCAGCGAgtgt < 1:1017131/150‑1 (MQ=255) tgaACTTCCTGCCGGTGCAGTAAGAGGCCTCTGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCATTTTTTCCAGTTGCAGCGAgtgt > 2:5764149/1‑150 (MQ=255) gaACTTCCTGCCGGTGCAGTAAGAGGCCTCTGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCATTTTTGCCAGTTGCCGCGGGTGTa > 1:6823313/1‑150 (MQ=255) aaCTTCCTGCCGGTGCAGTAAGAGGCCTCTGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCATTTTTGCCAGTTGCAGCGAGTGTAt < 2:7408537/150‑1 (MQ=255) cTTCCTGCCGGTGCAGTAAGAGGCCTCTGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCATTTTTACCAGTTGCATCGAGTGTATGa < 2:5082097/150‑1 (MQ=255) ttCCTGCCGGTGCAGTAAGCGGCCTCGGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGCGTTGATGAGTGTTCCTGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCATTTTTGCCAGTTGCAGCGAGTGTATGAc < 2:2134595/150‑1 (MQ=255) gCCGGTGCAGTAAGAGGCCTCTGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCt < 1:3693534/150‑1 (MQ=255) ccGGTGCAGTAAGAGGCCTCTGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTa < 1:6782051/150‑1 (MQ=255) ccGGTGCAGTAAGAGGCCTCTGCCGCACGCCCTTTGCGAAATGCCCAGACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTa < 2:1634687/150‑1 (MQ=255) ggTGCAGTAAGAGGCCTCTGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCGGCCACAGGCCGTTTTTCCCGGTGCCGCGCGGGTATGGCACCCgaga > 1:2007591/1‑150 (MQ=255) gTGCAGTAAGAGGCCTCTGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGaa < 2:2718990/150‑1 (MQ=255) gTGCAGTAAGAGGCCTCTGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCAGGAGCGAATCAACTTTTCGTCGGGCTGCAACTGGCATTTTTGCCTGTTGCAGCGAGTGTATGACAGCCTAGaa < 2:6360932/150‑1 (MQ=255) gCAGTAAGAGGCCTCTGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCATTTTTGCCAGTTTCAGCGGGTGTTTGAAAGCCTACaaat > 2:4703534/1‑148 (MQ=255) aGTAAGAGGCCTCTGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCATTTTTGCCAGTTGCAGc < 1:3589237/126‑1 (MQ=255) gTAAGTGGCCTCTGCCGCACGCCCTTTGCGAACTTCCCATACATGAATGAGGATTGATTTGATGAGTGTTCTTGAGCGATTATACGTTTCGTCGGGCTGAAACTGGCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCaa < 2:1893470/150‑1 (MQ=255) gTAAGAGGCCTCTGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGCGCGAATCAACGTTTCGTCGGGCTGCAACTGGCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCaa < 2:3959234/150‑1 (MQ=255) tAAGAGGCCTCTGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAAAATGCAATTTTTCCAGATTCAGCGAGTGTATTACAGCCAAGAAATAAAg > 1:2161088/1‑150 (MQ=255) tAAGAGGCCTCTGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATGGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAg < 1:6129266/150‑1 (MQ=255) tAAGAGGCCTCTGCCGCACGCCCTTTGCGAAATGCCCATACATGAAGGTGGTGTTTGTTGATGAGTGTTCATGAGCGAAAAAACTTTTCGTCGGGCTGCAACTGGCATTTTTGCCTGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAg < 1:5650528/150‑1 (MQ=255) tAAGAGGCCTCGGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGTATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGAAACTGGAATTTTTGCCTGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAg < 1:4510111/150‑1 (MQ=255) aaGAGGCCTCTGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCCACAGGCCTTTTTGCCCGGTGCAGCGCGGGTATGACAGCCGAGAATTCAAgg > 2:1464860/1‑150 (MQ=255) aaGAGGCCTCTGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAgg < 2:6282505/150‑1 (MQ=255) agGCCTCTGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACAGGCATTTTTTCCAGTTGCAGCGAGTGTATGACAGCCGAGAATTACAGGGag > 2:504918/1‑149 (MQ=255) ggCCTCTGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGaaa < 2:5931243/150‑1 (MQ=255) ggCCTCTGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACAGGCATTTTTTCCAGTTGCAGCGAGTGTATGACAGCCGAGAATTCAAGGGaaa > 1:5113194/1‑150 (MQ=255) ccTCTGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGAGTGAGTTGATGAGTGTTCAGGAGCGAATCAACGTTTCGTCGGGCTGCAACAGGCCGTTTTGCCCGTTGCAGCGGGTGGATGACAGCCGAGACTTCAAGGGcaaag > 2:2515395/1‑148 (MQ=255) ctctGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGACATTTTTTCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATgg > 2:5599569/1‑150 (MQ=255) tctGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGgt > 2:7349417/1‑150 (MQ=255) tctGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACATGCATTTTTTGCAGTTGCCGCGGGTGTATGACAGCCTAGAATAcaagggcaagggg > 1:4556937/1‑149 (MQ=255) tctGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACAGGCATTTTTTGCACTTTCAGCGAGTGTATTAAACCCTAGAATTCAAGGGaaaatgt > 1:1236463/1‑146 (MQ=255) ctGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGACTCAACGTTTCGTCGGGCTGCAACTGGCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGgtg < 2:71449/150‑1 (MQ=255) ctGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGgtg < 2:6787375/150‑1 (MQ=255) ccGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAAAAGGCATTTTTGGCAGTTGCACCGAGTGTATTTCACCCGAGAATTCAAGGGTAATGGTGttg > 1:3414014/1‑149 (MQ=255) cGCACGCCCTGTGCGAAATGCCCATACTTGAATGAGGATTTAGTTGAGGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGATGCAAGTGGAATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTtct < 2:4378063/150‑1 (MQ=255) gCCCTTTGCGAAATGCCAATACATTATTGTGTTTTGAGTTGATGTGTTTTATTGAGCGAATCAACGTTTCGTGGGGCTGCAACTGGAATTTTTGCCTGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAAg < 1:5228418/150‑1 (MQ=255) ccTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCAATTTTTCCAGTTGCAGCGAGTGTATTACACCCGAGAATTAAAGGGAAATTGTGTTGTGTAAGGt > 1:2897073/1‑150 (MQ=255) ccTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACAGGCCGTTTTGCCAGTTGCAGCGAGTGTATGACAGCCGAGAATTCAAGGGAAATGGTGTTCTCTAAGGt > 2:3227776/1‑150 (MQ=255) tttGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACAGGCATTTTTGCCACTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTTTTCTCTAAGGTCa > 2:231983/1‑150 (MQ=255) tttGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACAGGCAATTTTTCCAGTTGCAGCGAGTGTATTACAGCCAAGAATTAAAGGGAAATGGTGGTCTCTAAGGGCa > 1:1625341/1‑150 (MQ=255) tGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAAGGTCAtt < 2:3431409/150‑1 (MQ=255) tGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACAGGCATTTTTTCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGGGTTCTCTAAGGTCAtt > 2:4770840/1‑150 (MQ=255) aaTGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACATGCATTTTTTCCAGTTGAAGCGAGTGTAAGACAGCCGAGAAATCAAGGGAAATGGTGTTAGCTAAGGTGAATaaacc > 2:5279903/1‑147 (MQ=255) aTGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAAGGTCATTAATCGt < 2:6569245/150‑1 (MQ=255) gCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACTTTTCGTCGGGCTGCAACTGGAATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAAGGTCATTAATCGTGa < 1:1720827/150‑1 (MQ=255) gCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAAGGTCATTAATCGTGa < 2:3580065/150‑1 (MQ=255) ccATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACAGGCATTTTTTCCAGTTGCAGCGCGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAAGGTCATTAATAGTGaaa > 2:1931492/1‑150 (MQ=255) cATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACATGCAATTTTTCCACTTTCAGCGAGTGTATGTCAGCCAAGAATTAAATGGTAATTGTTTTGTCTAAGGTGATTAATAGTGaaaa > 1:4452009/1‑149 (MQ=255) cATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAAGGTCATTAATCGTGAAACGTTc < 1:550433/150‑1 (MQ=255) tgaatgaGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCAATTTTTCCACTTTCAGCGAGTGTATTACAGCCGAGAAATAAAGGGAAAAGGTGTTCTCTAAGGTCATTAATAGTGAAACGTTCGc > 2:3273208/1‑150 (MQ=255) gaatgaGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAAAAGGCAATTTTTGCAGTTTCAGCGGGTGTATTTAAACCAAGAAATAAACGGCAAATGTTTTGTCTAAGGTGATTAAAAGTTAAACCTTAGCa > 1:2800103/1‑150 (MQ=255) atgaGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTTGCATTTTTTCCAGTTTCAGCGCGTGTATTACCTCCTAGAAATAAATGGAAATGGTGTTCTCTAATGTCATTAATCGTGAAAAGTTCGCAAg > 2:6222303/1‑150 (MQ=255) ggATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAAGGTCATTAATCGTGAAACGTTCGCAAGCGTa < 2:1162146/150‑1 (MQ=255) gATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACAGGCAATTTTTCCAGTTGCAGCGAGTGTATGACAGCCAAGAAAAAAAGGGAAATGGTGATCTATAAGGTCAATAATAGTGAAAACTTAGCAAGCGTac > 1:2974722/1‑150 (MQ=255) aGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCaa > 2:6134054/1‑94 (MQ=255) aGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAAGGTCATTAATCGTGAAACGTTCGCAAGCGTACACGcc < 1:7349417/150‑1 (MQ=255) ttGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAAAAGGCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCGAGAATTCAAGGGCAAAGGTGTTGTCTAAGGTCATTAATAGTGAAAAGTTCGCAAGCGTACACGccca > 1:4876050/1‑149 (MQ=255) tgtTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTATAAGGTCAATAATAGGGAAAAGTTCGCAAGCGTACACGCCCAAAGGCGCt > 2:7088226/1‑150 (MQ=255) tgtTCATGAGCGAATCAACGTTTCGTCGGGCTGCAAATGGCATTTTTGCCAGTTGCAGCGAGTTTATGACAGCCTAGAATTCAATGGAAATGGTGGTCTCTAAGGTCATTAATCGTGGAACGTTCGCAAGCGTACACGCCCGACGgcgcg > 2:1818640/1‑149 (MQ=255) gAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAAGGTCATTAATCGTGAAACGTTCGCTAGCGTACACGCCCTACGGCGCTATTTggg < 2:1065168/150‑1 (MQ=255) gAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAAGGTCATTAATCGTGAAACGTTCGCAAGCGTACACGCCCTACGGCGCTATTTggg < 1:6630263/150‑1 (MQ=255) gAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAAGGTCATTAATCGTGAAACGTTCGCAAGCGTACACGCCCTACGGCGCTATTTggg < 2:4271722/150‑1 (MQ=255) aGCGAATCAACGTTTCGTCGGGCTGCAACAGGCCTTTTTGCCAGTTTCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATTGTGTTGTCTAAGGTCATTAATCGTGAAACGTTCGCAAGCGGACACGCCCTACGGCGCGAGTTgggg > 2:4576697/1‑150 (MQ=255) aaTCAACGTTTCGTCGGGCTGCAACTGGCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAAGGTCATTAATCGTGAAACGTTCGCAAGCGTACACGCCCTACGGCGCTATTTGGGGTGAt < 1:3961294/150‑1 (MQ=255) aaTCAACGTTTCGTCGGGCTGCAACTGGAATTTTTGCCTGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAAGGTCATTAATCGTGAAACGTTCGCAAGCGTACACGCCCTACGGCGCTATTTGGGGTGAt < 1:247448/150‑1 (MQ=255) tCAACGTTTCGTCGGGCTGCAACTGGCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAAGGTCATTAATCGTGAAACGTTCGCAAGCGTACACGCCCTACGGCGCTATTTGGGGTGATgg < 2:2924108/150‑1 (MQ=255) cAACGTTTCGTCGGGCTGCAACTGGCATTTTTTCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAATGTCATTAATAGTGAAACGTTCGCAAGCGTACACGCCCTACGGCGCTATTTGGGGTGATGGc > 2:2382305/1‑150 (MQ=255) aaCGTTTCGTCGGGCTGCAACAGGCAATTTTGCCACTTGCAGCGAGTGTAAGAAAGCCAATAAATAAAGGGAAATTGTGTTCTCTAAGGTCATTAATCGTGTAAAGTTAGCAACCGTAAACGCCCAACCGCGCTAATTTGGGTGTTGGcc > 1:4223401/1‑150 (MQ=255) tttCGTCGGGCTGCAACTGGCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAAGGTCATTAATCGTGAAACGTTCGCAAGCGTACACGCCCTACGGCGCTATTTGGGGTGATGGCCATTg < 2:4449337/150‑1 (MQ=255) gtcgGGCTGCAACTGGCATTTTTGCCTGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAAGGTCATTAATCGTGAAACGTTCGCAAGCGTACACGCCCTACGGCGCTATTTGGGGTGATGGCCATTGCTcc < 1:6471305/150‑1 (MQ=255) tcgGGCTGCAACTGGCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAAGGTCATTAATCGTGAAACGTTCGCAAGCGTACACGCCCTACGGCGCTATTTGGGGTGATGGCCATTGCTCCg < 2:3734680/150‑1 (MQ=255) cgGGCTGCAACTGGCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAAGGTCATTAATCGTGAAACGTTCGCAAGCGTACACGCCCTACGGCGCTATTTGGGGTGATGGCCATTGCTCCgt < 2:1856022/150‑1 (MQ=255) gCTGCAACTGGCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAAGGTCATTAATCGTg > 1:5080200/1‑88 (MQ=255) cTGCAACTGGCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAAGGTCATTAATCGTGAAACGTTCGCAAGCGTACACGCCCTACGGCGCTATTTGGGGTGATGGCCATTGCTCCGTGTTg > 1:1886065/1‑150 (MQ=255) cTGCAACTGGCAAAAATGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAAGGTCATTAATCGTGAAACGTTCGCAAGCGTACACGCCCTACGGCGCTATTTGGGGTGATGGCCATTGCTCCGTGTTg > 2:854962/1‑150 (MQ=255) cTGCAACTGGCAAAAATGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAAGGTCATTAATCGTGAAACGTTCGCAAGCGTACACGCCCTACGGCGCTAGTTGGGGTGATGGCCATTGCTCCGTGTTg > 2:4042222/1‑150 (MQ=255) cAACTGGCAAAAATGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAAGGTCATTAATCGTGAAACGTTCGCAAGCGTACACGCCCTACGGCGCTATTTGGGGTGATGGCCATTGCTCCGTGTTGAAg > 1:5444627/1‑150 (MQ=255) cAACTGGCAAAAATGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAAGGTCATTAATCGTGAAACGTTCGCAAGCGTACACGCCCTACGGCGCTATTTGGGGTGATGGCCATTGCTCCGTGTTGAAg > 1:3199906/1‑150 (MQ=255) aCTGGCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAAGGTCATTAATCGTGAAACGTTCGCAAGCGTACACGCCCTACGGCGCTATTTGGGGTGATGGCCATTGCTCCGTGTTGAAGTa > 2:6928764/1‑150 (MQ=255) aCTGGATTTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAAGGTCATTAATCGTGAAACGTTCGCAAGCGTACACGCCCTACGGCGCTATTTGGGGTGATGGCCATTGCTCCGTGTTGAAGTa < 1:799534/150‑1 (MQ=255) tGGCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAAGGTCATTAATCGTGAAACGTTCGCAAGCGTACACGCCCTACGGCGCTATTTGGGGTGATGGCCATTGCTCCgtgt < 1:7144634/141‑1 (MQ=255) tGGCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAAGGTCATTAATCGTGAAACGTTCGCAAGCGTACACGCCCTACGGCGCTATTTGGGGTGATGGCCATTGCTCCGTGTTGAAGTACa > 2:2622135/1‑150 (MQ=255) tGGCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAAGGTCATTAATCGTGAAACGTTCGCAAGCGTACACGCCCTACGGCGCTATTTGGGGTGATGGCCATTGCTCCGTGTTGAAGTACa > 1:5534452/1‑150 (MQ=255) ggCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAAGGTCATTAATCGTGAAACGTTCGCAAGCGTACACGCCCTACGGCGCTATTTGGGGTGATGGCCATTGCTCCGTGTTGAAGTACaa < 2:2441509/150‑1 (MQ=255) ggCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAAGGTCATTAATCGTGAAACGTTCGCAAGCGTACACGCCCTACGGCGCTATTTGGGGTGATGGCCATTGCTCCGTGTTGAAGTACaa > 1:5790437/1‑150 (MQ=255) cATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAAGGTCATTAATCGTGAAACGTTCGCAAGCGTACACGCCCTACGGCGCTATTTGGGGTGATGGCCATTGCTCCGTGTTGAAGTACAATg < 1:1095240/150‑1 (MQ=255) aTTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAAGGTCATTAATCGTGAAACGTTCGCAAGCGTACACGCCCTACGGCGCTATTTGGGGTGATGGCCATTGCTCCGTGTTGAAGTACAATgg > 2:3907781/1‑150 (MQ=255) tttttGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAAGGTCATTAATCGTGAAACGTTCGCAAGCGTACACGCCCTACGGCGCTATTTGGGGTGATGGCCATTGCTCCGTGTTGAAGTACAATGGt < 2:1734757/150‑1 (MQ=255) | CGCGCAGAGCCTGTTGCTGATGAACTTCCTGCCGGTGCAGTAAGAGGCCTCTGCCGCACGCCCTTTGCGAAATGCCCATACATGAATGAGGATTGAGTTGATGAGTGTTCATGAGCGAATCAACGTTTCGTCGGGCTGCAACTGGCATTTTTGCCAGTTGCAGCGAGTGTATGACAGCCTAGAATTCAAGGGAAATGGTGTTCTCTAAGGTCATTAATCGTGAAACGTTCGCAAGCGTACACGCCCTACGGCGCTATTTGGGGTGATGGCCATTGCTCCGTGTTGAAGTACAATGGT > NC_002947/3583273‑3583569 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |