| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,620,448 | A→G | 7.1% | intergenic (+19/‑210) | PP_3186 → / → codB | transcriptional regulator/cytosine transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,620,448 | 0 | A | G | 7.1% | 643.4 / 10.2 | 228 | intergenic (+19/‑210) | PP_3186/codB | transcriptional regulator/cytosine transporter |
| Reads supporting (aligned to +/- strand): ref base A (61/142); new base G (14/2); total (84/144) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.00e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 229 total aligned reads displayed.
CAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATTTCTTCCGGGTGGCGGCGCAG > NC_002947/3620300‑3620597 | cAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGAt < 1:1069474/150‑1 (MQ=255) ccTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATtactac > 2:7001368/1‑150 (MQ=255) cTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTAcc > 1:3822257/1‑150 (MQ=255) gATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTAcccag > 2:5328269/1‑150 (MQ=255) tGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACAAcccagcc > 2:6769827/1‑150 (MQ=255) tGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTAGTAATCAcccagcc < 1:4220006/150‑1 (MQ=255) aCTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTAGTAATCAcccagcccac < 2:6575516/150‑2 (MQ=255) cTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGATGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCCgg > 2:1703083/1‑150 (MQ=255) cgcgcgCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGGGTGGTGATTTCAAACCACCCCACGAcccc > 1:1304060/1‑148 (MQ=255) gcgcAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCGGGGTGAGTAAAACCCAGCCCAGGAACGCgtt > 2:831177/1‑150 (MQ=255) cgcAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGTATTTTTGGCCAGGCCTCCAGCCTGGAGGGGTTTTTCTGGCAATTGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTg < 1:2175336/150‑1 (MQ=255) gcagcaTGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCGGGGTGATTACTACCCAGCCCAGGACCGCTTTgg > 2:416847/1‑150 (MQ=255) cagcaTGACCGAGCAGCGGTTCGCCGAACTGGCTGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGt < 1:6798441/150‑1 (MQ=255) cagcaTGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGt < 1:4768783/150‑1 (MQ=255) agcaTGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGGGGGGGGGTGAATAACCACCCCAGGCCCGCGgtggtg > 1:2067077/1‑150 (MQ=255) agcaTGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTg < 2:1696436/150‑1 (MQ=255) tgcccGAGCAGCGGGGCGCCGAACTGGCAGGGACTGGGGGCCAGGCCTCCAGCCTGGAGGCGGAGGGCGGGCAACTGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATg < 2:5781531/147‑1 (MQ=255) tGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGTTTTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATg < 1:5822519/150‑1 (MQ=255) gACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGCTTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATgg < 2:3390571/150‑1 (MQ=255) gACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGATGGACGGGACCGTGAACACCGCCGTGGGCTGGGTGAGTACGACCCACCCCAGGACCGCTTTGGTGCATgg > 1:6134095/1‑150 (MQ=255) aCCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGGTGGGTGGTTAATAACCACCCCCCGACCCCATTTGTGCAAggg > 1:3990997/1‑150 (MQ=255) ccGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGTGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGgc < 1:146091/150‑1 (MQ=255) ccGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAACCCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGgc < 1:2583902/150‑1 (MQ=255) gAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGgcgc < 1:1034033/150‑1 (MQ=255) gAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGgcgc < 1:5299477/150‑1 (MQ=255) gAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCCCGTTGGTGCATGGgcgc > 2:3067700/1‑150 (MQ=255) gcagcGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCt < 1:7112530/150‑1 (MQ=255) agcGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCa < 2:3952173/150‑1 (MQ=255) gcGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCaa < 1:3668247/150‑1 (MQ=255) cGGTTCGCCGAACTGGCTGGGATTTTTGGCCAGGCCTCCAGCCTGGTGGCGTATTTGTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACGACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCaaa < 1:6231194/150‑1 (MQ=255) ggTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCaaaa < 2:6922354/150‑1 (MQ=255) tCGCCGAACTGGCTGGGATTTTTGGCCAGGCCTCCAGCCTGGTGGCGGTTTTCTGGCAAATGGGGTTGGAGGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATaa < 1:92394/150‑1 (MQ=255) tCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGTGGCGGATTTCTGGCAATTGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATaa < 1:4401210/150‑1 (MQ=255) tCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATaa < 2:5253895/150‑1 (MQ=255) tCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATaa < 2:5939807/150‑1 (MQ=255) tCGCCGAACGGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATaa < 1:4747361/150‑1 (MQ=255) gCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAgt > 2:6191321/1‑150 (MQ=255) ccGAACTGGCAGGGATTTTTGGCCCGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGAGGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAgtc < 1:2808629/150‑1 (MQ=255) ccGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAgtc < 2:6680989/150‑1 (MQ=255) aaCTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAgtcgtc < 2:4956498/150‑1 (MQ=255) aCTGGCAGGGATTTTTGGCCTGGCCTCCAGCCTGGTGGGGGTTTTCTGTCATTTGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTcc < 1:2744690/150‑1 (MQ=255) gCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGca < 1:517968/150‑1 (MQ=255) gCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTAAAACCCACCCCAGGACCGCGTTGGTGCAATGGCGCCGCAAAATAAGTAGTCCCGcc > 2:314927/1‑149 (MQ=255) aGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTTATTAATACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCGCAAAAAAAGTAGTCCCGcaca > 2:2720121/1‑150 (MQ=255) aGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACAACCCAGCCCAGGACCGCTTTTGTGCATGGGCGCCGCAAAATAAGTCGTCCCGcaca > 2:3893073/1‑150 (MQ=255) aTTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTCCCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTcc < 1:312505/150‑1 (MQ=255) gcctccAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGGGTTTACTACCCCGCCCAGGGCCGCGTTGGTGCATGGGCGCCGCAAAATAAGTCGTCCCGCACACTCCAGAt > 2:2111773/5‑150 (MQ=255) tGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATc < 2:6109561/150‑1 (MQ=255) tGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATc < 2:3822257/150‑1 (MQ=255) ggCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCACATGGGGTTGGACGGGACCGTGTAACCCGCCGTGGGCTGGGTGAGTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCg < 1:6651320/150‑1 (MQ=255) cAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCa < 2:6510383/150‑1 (MQ=255) cAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCa < 2:4100426/150‑1 (MQ=255) gCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCGGGGTGATTAAAAACCAGCCCAGGACCCCGTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGAt > 2:161951/1‑150 (MQ=255) cTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCGGGGTGTTTACTACCCAGCCCACGACCGCGTTGGTGCATGGGCGCCGCAAAAAAAGTCGTCCCGCACACACCAGATAGTCAGAtag > 1:6750164/1‑148 (MQ=255) ccAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGTTTACTAACCAGCCCAGGACCCCTTTGGTGCAAGGGCGCCTCAAAAAAAGTCGTCCCCCACACACCAGATAGTCAGATCGcc > 2:2039623/1‑149 (MQ=255) ccAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCa < 1:1941796/150‑1 (MQ=255) tGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTTATTACTAACCAGCCCAGGTCCCCGTTGGTTCAATGGCGCCTCAAAAAAATTCGTGACGCACACTCCAGATAGTCAGAACGCAGCTTTa > 2:5674836/1‑150 (MQ=255) tGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAATTCGTCCCGCACACACCAGATCGTCAGATCGCAGCGTTa > 2:1755243/1‑150 (MQ=255) tGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCGTTGGTGCATGGGCGCCTCAAAATAATTCGTCCCGCACACACCAGATCGTCAGATCGCAGCTTTa > 2:7361107/1‑150 (MQ=255) tGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGGGATTAATAACCAGCCCACGACCGCGTTGGTGCAATGGCGCCGCAAAAAAAGTAGTCCCCCCCACACCACATCGTCACATAGccccggta > 1:1668993/1‑143 (MQ=255) tGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCGGGGTGATTACTACCCAGCCCCCGACCGCATTGGTGCATGGGCGCCGCAAAATAATTCGTACCCCACACACCACATAGTCAGATCGCAGCTGTa > 1:1220679/1‑150 (MQ=255) ggAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTaa < 2:3187300/150‑1 (MQ=255) ggCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAAtgt < 2:5409846/150‑1 (MQ=255) gCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGGTTAATACCCAGCCCACGACCGCGTTGGTGCATTGGCGCCGCAAAATAATTCGTCCCGCCCACACCACATCGTCAGATCGCCGCGTTAAtttg > 1:4832738/1‑150 (MQ=255) gCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCGTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACACCAGATCGTCAGAACGCAGCTTTAAtgtg > 2:1083886/1‑150 (MQ=255) gCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTAAAACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACACCAGATCGTCAGATCGCAGCTTTAAtttt > 2:4620586/1‑147 (MQ=255) ttCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGt < 2:4968656/150‑1 (MQ=255) cTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGc < 2:3472776/150‑1 (MQ=255) tGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCa < 2:4873275/150‑1 (MQ=255) ggCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCat < 1:6626792/150‑1 (MQ=255) gCAAATGGGGTTGGCCGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCata < 1:6445793/150‑1 (MQ=255) cAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATTGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCATATCGCAGCTTTAATGTGCACAGTGCattt < 2:277380/150‑3 (MQ=255) cAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCatat < 1:1529858/150‑1 (MQ=255) cAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCatat < 2:4452055/150‑1 (MQ=255) tGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGac < 2:2864030/150‑2 (MQ=255) gTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCt < 1:985068/150‑1 (MQ=255) gTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCGTTGGTGCATGGGCGCCGCAAAATAAGTCGTCCCGCACCCTCCACATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATAAGGATTTCt > 2:5311785/1‑150 (MQ=255) tGGACGGGTCCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTgg < 1:5166921/150‑1 (MQ=255) tGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTgg < 2:7196771/150‑1 (MQ=255) ggACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTggg < 1:7001368/150‑1 (MQ=255) gACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGc < 1:1977208/150‑1 (MQ=255) gggACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGaa < 1:4558423/150‑1 (MQ=255) gggACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGaa < 2:5853341/150‑1 (MQ=255) gACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACa < 1:7438301/150‑1 (MQ=255) gACCGTGTAAACCGCCGTGGGCGGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAAAAAGTCGTCCCGCACACACCCGAGCGTCAGAGCGCAGCTTTAAAGTGCACACTGCAGATGGAGTTCTGGGCGAACa > 2:6041179/1‑150 (MQ=255) aCCGTTTAAACGGCCTTGGGCTTGGTTATTTCTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAg < 1:211661/150‑1 (MQ=255) ccGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGc < 2:3238761/150‑1 (MQ=255) aaCCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGAttt < 2:2025923/150‑1 (MQ=255) aCCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATttc < 2:4395930/150‑1 (MQ=255) ccgccgTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATttct < 2:1488454/150‑1 (MQ=255) gccgTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATttcttc < 2:6300110/150‑1 (MQ=255) gccgTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATttcttc < 1:4388328/150‑1 (MQ=255) ccgTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATTTCTTcc < 1:2282000/150‑1 (MQ=255) gTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATTTCTTCCgg < 2:5851111/150‑1 (MQ=255) gTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATTTCTTCCgg < 2:5702800/150‑1 (MQ=255) gTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATTTCTTCCgg < 2:2409952/150‑1 (MQ=255) tGGGCTGGGTAGTAATCACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCAGATGGATTTCTGGGCGAACAGCCCGATTTCTTCCggg > 1:5129323/1‑150 (MQ=255) ggTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATTTCTTCCGGGTggcggc < 1:2464036/150‑1 (MQ=255) gATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATTTCTTCCGGGTGGCGGCGCa < 1:5782492/150‑1 (MQ=255) gATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATTTCTTCCGGGTGGCGGCGCa < 2:7447198/150‑1 (MQ=255) | CAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATTTCTTCCGGGTGGCGGCGCAG > NC_002947/3620300‑3620597 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |