| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,934,792 | A→C | 9.4% | intergenic (+22/+16) | PP_3464 → / ← PP_5603 | hypothetical protein/FAD dependent oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,934,792 | 0 | A | C | 9.4% | 393.6 / 12.6 | 139 | intergenic (+22/+16) | PP_3464/PP_5603 | hypothetical protein/FAD dependent oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base A (91/32); new base C (3/13); total (94/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.79e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 161 total aligned reads displayed.
ACCACCTGCTGATCAGCCCGGTGGTTGGTTTCTACAAGCCGGAGCGCAGTGCGGCCAATAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCACCACCGGCGCCAGTTCCACCCCCTGC > NC_002947/3934643‑3934940 | accaccTGCTGATCAGCCCGGTGGTTGGTTTCTACAAGCCGGAGCGCAGTGCGGCCAATAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGaa < 2:3300028/150‑1 (MQ=255)accaccTGCTGATCAGCCCGGTGGTTGGTTTCTACAAGCCGGAGCGCAGTGCGGCCAATAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGaa < 2:6167766/150‑1 (MQ=255)accaccTGCTGATCAGCCCGGTGGTTGGTTTCTACAAGCCGGAGCGCAGTGCGGCCAATAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGaa < 2:6167946/150‑1 (MQ=255)accaccTGCTGATCAGCCCGGTGGTTGGTTTCTACAAGCCGGAGCGCAGTGCGGCCAATAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGaa < 1:3089388/150‑1 (MQ=255) cctccTGCTGATCAGCCCGGTGGTTGGTTTCTACAAGCCGGAGCGCAGTGCGGCCAATAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAag < 2:1985105/147‑1 (MQ=255) ccaccTGCTGATCAGCCCGGTGGTTGGTTTCTACAAGCCGGAGCGCAGTGCGGCCAATAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAag < 1:7212945/150‑1 (MQ=255) caccTGCTGATCAGCCCGGTGGTTGGTTTCTACAAGCCGGAGCGCAGTGCGGCCAATAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAagc < 1:1669125/150‑1 (MQ=255) caccTGCTGATCAGCCCGGTGGTTGGTTTCTACAAGCCGGAGCGCAGTGCGGCCAATAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAagc > 1:492766/1‑150 (MQ=255) accTGCTGATCAGCCCGGTGGTTGGTTTCTCCACGCCGGAGCGCAGTGCGGCCAATCGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAagca < 2:637575/150‑1 (MQ=255) accTGCTGATCAGCCCGGTGGTTGGTTTCTACAAGCCGGAGCGCAGTGCGGCCAATAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAagca < 2:1156174/150‑1 (MQ=255) ccTGCTGATCAGCCCGGTGGTTGGTTTCTACAAGCCGGAGCGCAGTGCGGCCAATAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAagcag > 2:4491516/1‑150 (MQ=255) ctgctgATCAGCCCGGTGGTTGGTTTCTACAAGCCGGAGCGCAGTGCGGCCAATAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAagcagc > 1:3706722/1‑150 (MQ=255) tgctgATCAGCCCGGTGGTTGGTTTCTACAAGCCGGAGCGCAGTGCGGCCAATAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGcc > 1:3265432/1‑150 (MQ=255) ctgATCAGCCCGGTGGTTGGTTTCTACAAGCCGGAGCGCAGTGCGGCTAATAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGcccc > 1:5073402/1‑150 (MQ=255) gATCAGCCCGGTGGTTGGTTTCTACAAGCCGGAGCGCAGTGCGGCCAATCGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGGCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCTTCGCAGccccag < 2:1162268/150‑3 (MQ=255) cAGCCCGGTGGTTGGTTTCTACAAGCCGGAGCGCAGTGCGGCCAATAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCaa > 1:2193038/1‑150 (MQ=255) aGCCCGGTGGTTGGTTTCTACAAGCCGGAGCGCAGTGCGGCCAATAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAAt > 1:1931183/1‑150 (MQ=255) gCCCGGTGGTTGGTTTCTACAAGCCGGAGCGCAGTGCGGCCAATAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAAtc > 2:2046152/1‑150 (MQ=255) cGGTGGTTGGTTTCTACAAGCCGGAGCGCAGTGCGGCCAATAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCa > 2:192550/1‑150 (MQ=255) gttggttTCTACAAGCCGGAGCGCAGTGCGGCCAATAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAaacca > 1:2721198/1‑150 (MQ=255) ttggttTCTACAAGCCGGAGCGCAGTGCGGCCAATAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAaaccaa > 1:7011079/1‑150 (MQ=255) gttttCTACACGCGGGCGCGCTGGGGGGCATTTTGTGGTCGGCAGGTGGGGGGGGGGTTTCCGGGGACTTACCTGATTTTGATTGTCGGGACCTTTTTCTGCGCCCAATTCGTGGGGGTGCGACGCAGCCCCGGCAATCTCAaaccaacc < 2:4705028/148‑1 (MQ=255) gttTCTACAAGCCGGAGCGCAGTGCGGCCAATAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAAccc > 2:6689604/1‑150 (MQ=255) tACAAGCCGGAGCGCAGTGCGGCCAATAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCt > 2:4336910/1‑150 (MQ=255) tACAAGCCGGAGCGCAGTGCGGCCAATAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCCGGGGCTGCTCCGCAGcccca > 2:7088446/1‑126 (MQ=255) aCAAGCCGGAGCGCAGTGCGGCCAATAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTc > 2:3405577/1‑150 (MQ=255) cAAGCCGGAGCGCAGTGCGGCCAATAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTcc > 2:7255551/1‑150 (MQ=255) aaGCCGGAGCGCAGTGCGGCCAATAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGCCCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCGGCTccc > 2:499157/1‑150 (MQ=255) aaGCCGGAGCGCAGTGCGGCCAATAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTccc > 2:3695146/1‑150 (MQ=255) aaGCCGGAGCGCAGTGCGGCCAATAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTccc > 2:1411552/1‑150 (MQ=255) aaGCCGGAGCGCAGTGCGGCCAATAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTccc > 2:3385002/1‑150 (MQ=255) ccGGAGCGCAGTGCGGCCAATAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGaa < 1:4802737/112‑1 (MQ=255) cGGAGCGCAGTGCGGCCAATAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAg > 1:7044137/1‑150 (MQ=255) aGCGCAGTGCGGCCAATAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCa > 1:6561693/1‑150 (MQ=255) cAGTGCGGCCAATAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCACCCAGCCAccgc > 2:193464/1‑150 (MQ=255) tGCGGCCAATAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACcgccgc > 2:2264830/1‑150 (MQ=255) aaTAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTTGGGACCTTTTTCTGTTCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCTATCTCAATCCAACCCGTGCTCCCCCAGCCACCGCCGCACGctcc > 2:3461061/1‑150 (MQ=255) gTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTctgctg > 2:3169040/1‑150 (MQ=255) gTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTctgctg > 2:504954/1‑150 (MQ=255) gCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCa > 2:2542477/1‑150 (MQ=255) gCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCAccc > 1:1798193/1‑150 (MQ=255) cTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCCGGGGCTGCTTCGCAGccccagg < 1:537548/90‑4 (MQ=38) cTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCCGGGGCTGCTTCGCAGccccagg > 2:537548/1‑87 (MQ=38) ggggtgggGGTGATACGGGCACTTACCTGAATTTGTTTGGCGGGACCTTTTTCTGATCCGACATCGTGGGGCTGCGAAGCACCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGc < 2:6920702/149‑1 (MQ=255) ggggtgggCGGTATACGGGTAGTTACCTCCAATTTTTGGGCGGCACCTTTTTCGGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGc < 2:6920928/149‑1 (MQ=255) gtgggCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAg > 2:1524611/1‑150 (MQ=255) ggCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGccc > 1:6795458/1‑150 (MQ=255) gCGGGATCCGGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGACCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGcccc < 2:4229763/150‑1 (MQ=255) ggtttACCGGGACGTACCTGCAGTTGATGGTCGGGAGCTTTTTCTGACGCCTCATCGTGGGGATGCTAAGCACCCCCGGCAATCTCAACCCAACCCCTGCTCCCCCAGCCCCCGACGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGa < 2:5998891/146‑1 (MQ=255) ggtaTACGGGGACTTACCTCCAATTGATTGTCGGGACCTTTTGCTGAGCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGa < 2:6507226/147‑1 (MQ=255) gggATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCTAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGa < 2:1682829/150‑1 (MQ=255) aCCGGTACTTACCTGCAATTGTTTGTGGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGACGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATa < 2:1727319/150‑1 (MQ=255) cGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATAcc > 2:2928828/1‑150 (MQ=255) cGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATAcc > 1:132353/1‑150 (MQ=255) cGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATAcc > 2:2187039/1‑150 (MQ=255) aCTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCt > 2:5906125/1‑150 (MQ=255) ttACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCa > 2:7329294/1‑150 (MQ=255) aCCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAAc > 2:3260361/1‑150 (MQ=255) ccTGCATTTTATTGTGGGTACCTTTTTCTGATCCGACATCGTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACa < 2:4080413/150‑1 (MQ=255) cTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAg > 2:1005185/1‑150 (MQ=255) tGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCACTCTCAAACCAACCCCTGCTCCCCCAGCCCCCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAAAACCGCCTCAACAgg > 2:5253697/1‑150 (MQ=255) tGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAgg > 2:4986078/1‑150 (MQ=255) tGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAgg > 1:145314/1‑150 (MQ=255) tGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAgg > 1:257659/1‑150 (MQ=255) attgattgTCGGGACCTTTTTCTGATCCGACATCCTCGCGCTGCGAAGCAGCCCCGGCACTCACAAACCAACCCCAGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCACAACAGgccgc > 2:267975/1‑150 (MQ=255) attgattgTCGGGACCTTTTTCTGATCAGACATCCTGGGGCTGCGAAGCAGCCCCGGAAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACCCACCTCTGCTGTTAACCCGCAAGCCCCGACAAAACCGCCTCAACAGgccgc > 1:4198827/1‑150 (MQ=255) tgattgTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGccc > 1:5141703/1‑150 (MQ=255) tgattgTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGccc > 2:1748776/1‑150 (MQ=255) gggACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTa > 2:5503326/1‑150 (MQ=255) ggACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTAt > 2:4286603/1‑150 (MQ=255) ggACCTTTTTCTGACCCGACATCCTGGGGGTGCTACGCACCCCCGGCAATCTCAAACCACCCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTAt < 2:3668473/150‑1 (MQ=255) aCCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCACCTCTGCTGTTCACCCGCAAGCCCCGACAATACAGCCTCAACAGGCCGCCCACTGCGTAtat > 1:3761201/1‑148 (MQ=255) cTTTTTCTGATCCCAAATCCTGGGGCTGCCACGCACCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGt < 2:756305/150‑1 (MQ=255) tttttCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTc > 1:7280628/1‑150 (MQ=255) tCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGcac > 1:1827019/1‑150 (MQ=255) gATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGcaccac > 1:987270/1‑150 (MQ=255) gATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGcaccac > 1:5803279/1‑150 (MQ=255) aTCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCaccacc > 1:320861/1‑150 (MQ=255) aTCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCaccacc > 1:946181/1‑150 (MQ=255) aTCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCaccacc > 1:354517/1‑150 (MQ=255) aTCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCaccacc > 1:355145/1‑150 (MQ=255) tCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCACCACCg > 1:3525479/1‑150 (MQ=255) tCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCACCACCg > 1:4985740/1‑150 (MQ=255) cGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCCCTGCGTATTTGTCGCACCACCGgc > 1:719972/1‑150 (MQ=255) cGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCACCACCGgc < 2:1729368/150‑1 (MQ=255) gACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCACCACCGgcg > 2:2987780/1‑150 (MQ=255) aattCCTGGGGCTGCTAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCACCACCGgcgc < 1:6651581/147‑1 (MQ=255) aTCGTGGGGGTGCTAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCACCACCGGCGCCa < 1:2386943/150‑1 (MQ=255) aTCGTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCACCACCGGCGCCa < 1:6135631/150‑1 (MQ=255) aTCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCACCACCGGCGCCa > 2:5407453/1‑150 (MQ=255) ccTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGca > 1:4090406/1‑136 (MQ=255) ccTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGca < 2:4090406/136‑1 (MQ=255) tGGGGCTGCGACGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCACCACCGGCGCCAGTTc < 2:3125427/150‑1 (MQ=255) gggCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCACCACCGGCGCCAGTTCCa < 1:2986647/150‑1 (MQ=255) tGCTAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCACCACCGGCGCCAGTTCCAcccc < 2:492766/150‑1 (MQ=255) ctaaGCACCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCACCACCGGCGCCAGTTCCACCCCCt < 1:6309366/148‑1 (MQ=255) cGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCACCACCGGCGCCAGTTCCACCCCCt < 2:5141703/150‑1 (MQ=255) cGAACCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCACCACCGGCGCCAGTTCCACCCCCt < 2:3706722/150‑1 (MQ=255) aaGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCACCACCGGCGCCAGTTCCACCCCCTGc > 2:1349279/1‑150 (MQ=255) aaGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCACCACCGGCGCCAGTTCCACCCCCTGc > 2:296866/1‑150 (MQ=255) | ACCACCTGCTGATCAGCCCGGTGGTTGGTTTCTACAAGCCGGAGCGCAGTGCGGCCAATAGTGGTACGCAGCTGGGTGGGCGGGATACCGGGACTTACCTGCAATTGATTGTCGGGACCTTTTTCTGATCCGACATCCTGGGGCTGCGAAGCAGCCCCGGCAATCTCAAACCAACCCCTGCTCCCCCAGCCACCGCCGCACGCTCCTCTGCTGTTCACCCGCAAGCCCCGACAATACCGCCTCAACAGGCCGCCCACTGCGTATTTGTCGCACCACCGGCGCCAGTTCCACCCCCTGC > NC_002947/3934643‑3934940 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |