| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 1,011,323 | +T | intergenic (‑258/+192) | PP_0871 ← / ← SBRG_Ecoli_galM | glycine betaine/carnitine/choline ABC transporter permease/SBRG_Ecoli_galM |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,011,323 | 1 | . | T | 99.7% | 1182.2 / ‑4.0 | 324 | intergenic (‑258/+192) | PP_0871/SBRG_Ecoli_galM | glycine betaine/carnitine/choline ABC transporter permease/SBRG_Ecoli_galM |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base T (173/150); total (173/151) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 335 total aligned reads displayed.
GAAAATGCTGATGAAACCAGTCCCCAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑G‑CTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGAGTTGCAAATATGTCGGTGTTTGCT > NC_002947/1011174‑1011466 | gAAAATGCTGATGAAACCAGTCCCCAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑g > 1:2131972/1‑150 (MQ=255) aaaaTGCTGATGAAACCAGTCCCCAACCGAAGCGGGTTGCTGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCTGTTTTAATCGCTGGGTTGCGGTTTTTTGGGCGAGAAAAACAGCGACTTGAT‑gt < 1:5250839/150‑2 (MQ=255) aaaaTGCTGATGAAACCAGTCCCCAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑gt > 2:5726320/1‑149 (MQ=255) atgaAACCAGTCCCCAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAatca > 2:3542024/1‑150 (MQ=255) tgaAACCAGTCCCCAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAatcat > 1:3340025/1‑150 (MQ=255) aaCCAGTCCCCAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCtt > 1:3032982/1‑150 (MQ=255) cAGTCCCCAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTa > 1:1902788/1‑150 (MQ=255) aGTCCCCACCCGACGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTaa < 1:4242611/150‑1 (MQ=255) aGTCCCCAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGCGGGCGTAAAGGTTCCCATCTGAGGCGGCATTCGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTaa > 1:1148320/1‑150 (MQ=255) tCCCCAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATg > 2:3017425/1‑150 (MQ=255) tCCCCAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATg > 1:2604047/1‑150 (MQ=255) ccccAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGa < 2:1197862/150‑1 (MQ=255) cccAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCTTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGat > 1:3480662/1‑150 (MQ=255) ccAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGata > 2:3676349/1‑150 (MQ=255) ccAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGata > 2:3593118/1‑150 (MQ=255) ccAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGata > 1:3729598/1‑150 (MQ=255) cAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGataa > 2:5144751/1‑150 (MQ=255) aaCCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGataat > 2:2168717/1‑150 (MQ=255) ccGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGTGAAAAACAGCGACTTGAT‑GTCTCAAATCTTCTTTTAATGttaatta > 2:5648261/1‑148 (MQ=255) cGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCa < 1:3593118/150‑1 (MQ=255) gTTGCAGGGGAGTGGATGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATta < 1:2753388/150‑1 (MQ=255) ctggggAGTGGACGTCTCCGTGGGCGTAATGGTTCCCATCTGAGGCGGCATTTGGCCTGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATAtt < 2:225925/148‑1 (MQ=255) aGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTg < 1:1933083/150‑1 (MQ=255) ggggAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGc > 1:5158555/1‑150 (MQ=255) gAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCcgc < 1:4784531/150‑1 (MQ=255) gACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGcgacga > 2:5951918/1‑150 (MQ=255) gACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGcgacga > 2:3483869/1‑150 (MQ=255) aCGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGaa > 1:1461859/1‑150 (MQ=255) gTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGc > 2:4777660/1‑150 (MQ=255) gTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGc > 1:708962/1‑150 (MQ=255) gTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGc < 2:5917971/150‑1 (MQ=255) ctcCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCaa < 2:2065572/150‑1 (MQ=255) tcCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGaa > 1:3181717/1‑145 (MQ=255) tcCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGaa < 2:3181717/145‑1 (MQ=255) tcCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAAc > 1:3555540/1‑150 (MQ=255) tcCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAAc > 2:1303276/1‑150 (MQ=255) ccGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACa < 2:1025476/150‑1 (MQ=255) ggCGTAAAGGTTCCCATCTGAGGCGGCTTTTGGCCAGTGTTACTCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAAt < 2:5217311/150‑1 (MQ=255) ggCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAAt < 2:5512861/150‑1 (MQ=255) gTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCt > 1:43488/1‑150 (MQ=255) gTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCt > 2:557689/1‑150 (MQ=255) gTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCt > 1:3933528/1‑150 (MQ=255) tAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCtt < 2:2928526/150‑1 (MQ=255) aaaGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTa < 2:5270837/150‑1 (MQ=255) aaGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTAc > 1:2932604/1‑150 (MQ=255) tCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATa > 1:5447769/1‑150 (MQ=255) cccATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATaa < 1:5940664/150‑1 (MQ=255) ccATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAAc > 2:342616/1‑150 (MQ=255) ccATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAAc > 2:5176907/1‑150 (MQ=255) aTCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCa > 2:793257/1‑150 (MQ=255) tCTGAGGCGGCATTTGGCCAGTGTTAAACGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCATTTAAAGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTAACGCATAACCAt > 1:177009/1‑150 (MQ=255) cTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAAt > 2:2040584/1‑133 (MQ=255) tGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAg < 2:930317/150‑1 (MQ=255) gAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGc < 1:4139585/150‑1 (MQ=255) gcggcATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGaa < 2:2803618/150‑1 (MQ=255) gcggcATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGATTACGCATAACCATAGCGaa > 1:4574426/1‑150 (MQ=255) ggcATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGaaaa < 1:5858322/150‑1 (MQ=255) aTTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAg > 2:5231023/1‑150 (MQ=255) tttGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGt < 2:588581/150‑1 (MQ=255) tttGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGt > 1:5588186/1‑150 (MQ=255) ttGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTg < 1:2090232/150‑1 (MQ=255) gCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGgcg < 1:5009341/150‑1 (MQ=255) aGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACTCATAACCATAGCGAAAATAGTGGCGCAg > 1:3080030/1‑150 (MQ=255) aGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTg < 2:408635/144‑1 (MQ=255) gtgtTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCtt > 1:1516786/1‑66 (MQ=255) gtgtTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCtt < 2:1516786/66‑1 (MQ=255) tAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTaa < 2:3267851/150‑1 (MQ=255) tAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTaa < 2:4010442/150‑1 (MQ=255) aaTCGCTGGGTTGCGGGTTTTTGGGCGAGTAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTTATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAg < 1:4494304/150‑1 (MQ=255) aaTCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAg < 2:3932073/150‑1 (MQ=255) aTCGCTGGGTTGCGGGTTTTGGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAgg < 2:5093752/150‑1 (MQ=255) gCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGgttg > 1:5621231/1‑150 (MQ=255) tGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGgttgtt < 2:2604047/150‑1 (MQ=255) ggTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACGATAGCGAAAATAGTGGCGCAGTGTAAGGTtgttgt > 2:1455141/1‑150 (MQ=255) gTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTtgtg > 1:2405679/1‑150 (MQ=255) gCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAat > 1:5308755/1‑150 (MQ=255) gggTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTg < 2:2430117/124‑1 (MQ=255) ggTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATAtt < 1:1041565/150‑1 (MQ=255) ggTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATAtt < 1:5768916/150‑1 (MQ=255) tttttGTGCTATAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGa < 2:1334791/150‑1 (MQ=255) tttttGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGa < 1:2448798/150‑1 (MQ=255) tttttGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGa < 2:1967520/150‑1 (MQ=255) tttttGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGa < 2:4669529/150‑1 (MQ=255) tttGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGAGt < 1:2862866/150‑1 (MQ=255) ttGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGAGtt < 1:4916591/150‑1 (MQ=255) tGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGAGTTg < 2:1746874/150‑1 (MQ=255) gggCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGAGTTGc < 2:1767834/150‑1 (MQ=255) gCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTtgtg < 2:186497/135‑1 (MQ=255) gCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGAGTTGCaa > 1:3619918/1‑150 (MQ=255) gagaAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGAGTTGCAAat > 2:5476024/1‑150 (MQ=255) gaAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGAGTTGCAAatat > 2:1238520/1‑150 (MQ=255) gaAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGAGTTGCAAatat > 2:4250475/1‑150 (MQ=255) aaaCAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGAGTTGCAAATATGTc > 2:5000428/1‑150 (MQ=255) aaCAGCGACTTGATCA‑CTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTCGCGCAGAGTAAGGTTGTTGTGAATATTGAGTTGCAAATATGTCg < 2:2764901/150‑1 (MQ=255) cAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGAGTTGCAAATATGTCGgt < 1:93678/150‑1 (MQ=255) gCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGAGTTGCAAATATGTCGgtgt < 1:2030610/150‑1 (MQ=255) cTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGAGTTGCAAATATGTCGGTGTTTGc > 1:755790/1‑150 (MQ=255) cTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGAGTTGCAAATATGTCGGTGTTTGc > 1:3849681/1‑150 (MQ=255) ttGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGAGTTGCAAATATGTCGGTGTTTGCt > 1:1558893/1‑150 (MQ=255) ttGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGAGTTGCAAATATGTCGGTGTTTGCt > 1:1284604/1‑150 (MQ=255) | GAAAATGCTGATGAAACCAGTCCCCAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑G‑CTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGAGTTGCAAATATGTCGGTGTTTGCT > NC_002947/1011174‑1011466 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |