BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1491962 =	270 (0.650)	16 (0.050)	10/236	25.8	7.1%	intergenic (+22/+108)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
*	?	NC_002947	1492052 =	204 (0.610)	16 (0.050)	10/236	25.8	7.1%	intergenic (+112/+18)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 272 total aligned reads displayed.

TACCGTGGCGAACCGGGTTATCTTCATGGACAAGGGCGAGATTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTGGAGCCTGCGTAATTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCAACGCGGCCCTGGGTTTATTTCTCTTCCTGGCTGGCAGCCGGCGCCGGTGGCGGCC  >  NC_002947/1491814‑1492110

tACCGTGGCGAACCGGGTTATCTTCATGGACAAGGGCGAGATTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAg                                                                                                                                                      >  1:6507975/1‑149 (MQ=255)

 aCCGTGGCGAACCGGGTTATCTTCATGGACAAGGGCGAGATTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGc                                                                                                                                                     <  1:7289655/149‑1 (MQ=255)

 aCCGTGGCGAACCGGGTTATCTTCATGGACAAGGGCGAGATTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACAAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGc                                                                                                                                                     <  2:677572/149‑1 (MQ=255)

     tGGCGAACCGGGTTATCTTCATGGACAAGGGCGAGATTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCtt                                                                                                                                                 <  1:7277013/149‑1 (MQ=255)

      ggCGAACCGGGTTATCTTCATGGACAAGGGCGAGATTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCCGCGCAGcccaaa                                                                                                                                                <  2:2182741/149‑4 (MQ=255)

         gAACCGGGTTATCTTCATGGACAAGGGCGAGATTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACTGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTcgcg                                                                                                                                             <  2:2746807/149‑1 (MQ=255)

             cGGGTTATCTTCATGGACAAGGGCGAGATTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCa                                                                                                                                         <  2:1318808/149‑1 (MQ=255)

              gggTTATCTTCATGGACAAGGGCGAGATTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCAc                                                                                                                                        >  2:3021740/1‑149 (MQ=255)

               ggTTATCTTCATGGACAAGGGCGAGATTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACg                                                                                                                                       <  2:5237501/149‑1 (MQ=255)

               ggTTATCTTCATGGACAAGGGCGAGATTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACg                                                                                                                                       <  1:4433049/149‑1 (MQ=255)

                  tATCTTCATGGACAAGGGCGAGATTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGccc                                                                                                                                    <  2:8255850/149‑1 (MQ=255)

                   aTCTTCATGGACAAGGGCGAGATTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCg                                                                                                                                   <  2:8390954/149‑1 (MQ=255)

                      ttCATGGACAAGGGCGAGATTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTc                                                                                                                                >  2:6026674/1‑149 (MQ=255)

                       tCATGGACAAGGGCGAGATTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTcc                                                                                                                               <  2:1901360/149‑1 (MQ=255)

                        cATGGACAAGGGCGAGATTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTccc                                                                                                                              >  2:7108089/1‑149 (MQ=255)

                         aTGGACAAGGGCGAGATTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTGCGCGGGCGCGCCCGCTcccc                                                                                                                             >  1:2420111/1‑148 (MQ=255)

                           ggACAAGGGCGAGATTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCcaca                                                                                                                           >  2:9004837/1‑149 (MQ=255)

                           ggACAAGGGCGAGATTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCcaca                                                                                                                           <  2:266522/149‑1 (MQ=255)

                           ggACAAGGGCGAGATTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCcaca                                                                                                                           <  2:4504806/149‑1 (MQ=255)

                            gACAAGGGCGAGATTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAg                                                                                                                          <  1:7046443/149‑1 (MQ=255)

                            gACAAGGGCGAGATTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAg                                                                                                                          >  1:1289091/1‑149 (MQ=255)

                                  ggCGAGATTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAggaatta                                                                                                                    <  1:7594156/149‑6 (MQ=255)

                                  ggCGAGATTGGGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCAGTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACCGGTTTAg                                                                                                                    >  2:4982464/1‑149 (MQ=255)

                                    cGAGATTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAgcg                                                                                                                  <  2:5454507/149‑1 (MQ=255)

                                     gagaTTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAgcgc                                                                                                                 <  2:4445013/149‑1 (MQ=255)

                                      agaTTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCt                                                                                                                >  1:4991380/1‑149 (MQ=255)

                                       gagtgtgGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTg                                                                                                               <  1:7980940/146‑1 (MQ=255)

                                        aTTGTGGAGCAGGCCGCGGATGATGTCTTCTTCGAACGGCCGCGAAGTGACCTGACCAAGTTGTTCATCAGCCAGATCCTGCTTTGATGCTGTTTGGGCTGCGCGGCTGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTgg                                                                                                              <  1:6226791/149‑1 (MQ=255)

                                        aTTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCAGTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTgg                                                                                                              >  1:8980569/1‑149 (MQ=255)

                                           gtgGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCtt                                                                                                           <  1:3059235/149‑1 (MQ=255)

                                            tgGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCttt                                                                                                          <  1:2646322/149‑1 (MQ=255)

                                            tgGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCttt                                                                                                          <  2:7855309/149‑1 (MQ=255)

                                            tgGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCttt                                                                                                          <  2:2617668/149‑1 (MQ=255)

                                             ggAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTg                                                                                                         <  2:3421640/149‑1 (MQ=255)

                                             ggAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCAGTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCCCGCCCGCGCCCCCAGGTTTTGCGCTggggtgg                                                                                                         >  1:1832898/1‑144 (MQ=255)

                                              gAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTgg                                                                                                        <  2:1207418/149‑1 (MQ=255)

                                              gAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGGTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTgg                                                                                                        <  1:6695859/149‑1 (MQ=255)

                                               aGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTGGa                                                                                                       <  1:2813818/149‑1 (MQ=255)

                                                  aGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTGGAGcc                                                                                                    <  1:7217286/149‑1 (MQ=255)

                                                  aGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTGGAGcc                                                                                                    <  1:2185192/149‑1 (MQ=255)

                                                   ggCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTGGAGCCt                                                                                                   <  2:2548345/149‑1 (MQ=255)

                                                   ggCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTGGAGCCt                                                                                                   <  2:6798707/149‑1 (MQ=255)

                                                    gCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTGGAGCCTg                                                                                                  <  1:953877/149‑1 (MQ=255)

                                                    gCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTGGTTCCTCAGCCAGATCCTGCAGGGAGGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCCCGCCCGCTCCCACAGGTTTAGCGCTGGCGGTGGCGCCTg                                                                                                  >  2:5736407/1‑149 (MQ=255)

                                                     ccGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTTTGGCGCTGGCGTTGGGGCCGGc                                                                                                 >  2:8114968/1‑149 (MQ=255)

                                                     ccGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTGGAGCCTGc                                                                                                 <  1:6026674/149‑1 (MQ=255)

                                                       gcgcCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTGGTGCCTGCGt                                                                                               >  2:3721102/1‑149 (MQ=255)

                                                           cGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTGGAGCCTGCGTAAtt                                                                                           <  1:8767278/149‑1 (MQ=255)

                                                           cGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTGGAGCCTGCGTAAtt                                                                                           <  1:2948757/149‑1 (MQ=255)

                                                           cGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTGGAGCCTGCGTAAtt                                                                                           <  1:5620060/149‑1 (MQ=255)

                                                            ggATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCCCGCCCGCGCCCACAGGGTTAGCGCGGGCGTTGGCGGCGGCGtccatc                                                                                          >  1:5687534/1‑144 (MQ=255)

                                                             gATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTGGAGCCTGCGTAATTcc                                                                                         <  2:3657387/149‑1 (MQ=255)

                                                             gATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTGGAGCCTGCGTAATTcc                                                                                         <  2:5706463/149‑1 (MQ=255)

                                                              aTGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTGGAGCCTGCGTAATTCCt                                                                                        <  2:6334642/149‑1 (MQ=255)

                                                               tGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTGGAGCCTGCGTAATTCCtg                                                                                       <  2:868566/149‑1 (MQ=255)

                                                                gACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTGGAGCCTGCGTAATTCCtgt                                                                                      <  2:6250634/149‑1 (MQ=255)

                                                                gACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTGGAGCCTGCGTAATTCCtgt                                                                                      <  1:3883078/149‑1 (MQ=255)

                                                                gACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGGTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTGGAGCCTGCGTAATTCCtgt                                                                                      <  1:7694422/149‑1 (MQ=255)

                                                                 aCTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTGGAGCCTGCGTAATTCCtgtg                                                                                     <  1:1918660/149‑1 (MQ=255)

                                                                   ttcttcGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCAGGCTTTGGAGCCGGCGTAATTCCGGTggg                                                                                   >  2:1120148/1‑149 (MQ=255)

                                                                    tcttcGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGGACGCCCCCACCCACACGTTTTTCGGTGGCGTTTGGGGCGGCGTAATTACGGTgggg                                                                                  >  1:1175044/1‑148 (MQ=255)

                                                                      ttcGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTGGAGCCTGCGTAATTCCTGTGGGAGc                                                                                >  2:4961142/1‑149 (MQ=255)

                                                                       tcGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTGGAGCCTGCGTAATTCCTGTGGGAGCg                                                                               <  1:8522302/149‑1 (MQ=255)

                                                                       tcGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTGGAGCCTGCGTAATTCCTGTGGGAGCg                                                                               <  1:5866107/149‑1 (MQ=255)

                                                                        cGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTGGAGCCTGCGTAATTCCTGTGGGAGCgg                                                                              <  2:8550720/149‑1 (MQ=255)

                                                                         gACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTGGAGCCTGCGTAATTCCTGTGGGAGCggg                                                                             <  1:6791251/149‑1 (MQ=255)

                                                                           ccGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTGTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGGTTTGCGCTGGCTTTGGAGCCGGCGGAATTCCGGTGGGAGCGGGCg                                                                           >  2:4741980/1‑149 (MQ=39)

                                                                           ccGGCCGCGCAGTGACCGGACAAAGTGGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGGCGCTGGCTTTGGCGCCTGCGTAAGTCCTGTGGGAGCGGGCg                                                                           >  2:5096714/1‑149 (MQ=39)

                                                                            cGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTGGAGCCTGCGTAATTCCTGTGGGAGCGGGCGt                                                                          >  2:7435152/1‑149 (MQ=255)

                                                                               ccGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTGGAGCCTGCGTAATTCCTGTGGGAGCGGGCGTGcc                                                                       <  2:6629293/149‑1 (MQ=255)

                                                                                      gTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTGGAGCCTGCGTAATTCCTGTGGGAGCGGGCGTGCCCGCGAAg                                                                <  2:8240570/149‑1 (MQ=255)

                                                                                        gACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCGCGCCCCCGCCCCCCCGGTTAGCGCGGGGGTTTGGGCCGGCGGAAATAAGGGGGGGGCGGGCGGGCCCCCGCAggg                                                              >  1:1027691/1‑149 (MQ=255)

                                                                                           cGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTTGCGCTGGCTGTGGAGCCTGCGTTATTCCGGTGGGAGCGGGCGTGCCCGCGAAGGGCCg                                                           >  2:7629695/1‑149 (MQ=255)

                                                                                           cGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCGCCCACCGGGTTAGCGCTGGCGTTGGAGCCGGCGGAATTCCTGGGGGAGCGGGCGTGCCCGCGAAGGGCCg                                                           >  2:2109824/1‑149 (MQ=38)

                                                                                            ggACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTGTTGCGCTGGCTTTGGAGCCTGCGTAATTCCGGTGGGCGCGGGCGTGCCCGCGAAGGGCCGc                                                          >  1:7542586/1‑149 (MQ=255)

                                                                                               ccAAGTTGTTCCTCAGCCAGATCCTGCATTGTTGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTGGAGCCTGCGTAATTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCAAc                                                       <  2:2156235/149‑1 (MQ=255)

                                                                                                cAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTCGCGCTGGCTTTGGAGCCTGCGTAATTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCAAcg                                                      <  2:1662740/149‑1 (MQ=255)

                                                                                                 aaGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCCCACCCACACGTTTAGCGCGGGGGTTGGGGGCGGCGGAAATCCTGTGGGCGCCGGGGTGCCCCCCAATGGccccccccc                                                     >  1:4571212/1‑142 (MQ=255)

                                                                                                    ttgttCCTCAGCCAGATCCTGCATGGATGCTGTTTGGGCGGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACTGGTTTAGCGCTGGCTTTGGAGCCTGCGTAATTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCAACGCGGc                                                  <  2:931797/149‑1 (MQ=255)

                                                                                                       ttCCTCAGCCAGATCCTGCCTTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACTCCCGCTCCCACAGTTTTAGCGCAGGCTTTGGAGGCATCGTAATTCCTGGGGGAGCGGGCGTGCGCGCGAAGGGCCGCAACGCGGccgg                                               >  2:2892834/1‑147 (MQ=255)

                                                                                                        tCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCCCCCCCCCAGGTTTTGCGGAGGGGGTGGCGCCGGCCGAATTCCGGTGGGAGCGGGCGGGCCCGCGGACGGCCGCACCCCGGcccag                                              >  1:427520/1‑147 (MQ=255)

                                                                                                          cTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACCCCCCCACCCACCCGTTTAGCCCGGGGTTTGGAGCCGGGGGAAATAAAGTTGGAGCGGGCGTGCCCGCGAAAGGCCCCCAAGCGGCCCgggg                                            >  1:2585505/1‑149 (MQ=255)

                                                                                                          cTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCAAGCACGCACCCACAGGAGAAGACTTGGCTGTGGTCACACCGTAATTCCTGTGGGCGGGGGCGTGGCCGCGAAGGGCCGCGTCGCGGGCCTggg                                            >  1:5783534/1‑149 (MQ=255)

                                                                                                           tCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCGCCCAAACGTTTAGCGCGGGCTTTGGCGCCGGCGTGATTCCGGGGGGAGCGGGCGTGCCCGCGAAGGGCCGCACCGCGGGGCTgggg                                           >  1:8743457/1‑148 (MQ=255)

                                                                                                            cAGCCAGAGCCTGCAGTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACCGGTTTCGCGCGGGCTTTGGGGCCGGCGAAATTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCAACGCGGCCCTGGGtt                                          <  2:7580911/149‑1 (MQ=37)

                                                                                                                cAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCCCCCCCCCGCCCCCACGTTTAGCCCGGGCGTTGGTGCCGGCGGTATTACGGTGGGGGCGGGGGTGCCCGCGCAGGGGCGCCACCCCGCCCGGGGGTTAtt                                      >  1:6338120/1‑149 (MQ=255)

                                                                                                                 aGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTGGAGCCTGCGTAATTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCAACGCGGCCCTGGGTTTAttt                                     <  2:646153/149‑1 (MQ=255)

                                                                                                                 aGATCCTGAATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTGGAGCCTGCTTATTTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCAACGCGGCCCTGGGTTTAttt                                     <  2:3885377/149‑1 (MQ=255)

                                                                                                                        gCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTGGAGCCTGCGTAATTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCAACGCGGCCCTGGGTTTATTTCTATTcc                              >  2:4052969/1‑149 (MQ=255)

                                                                                                                        gCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTGCGCGGGCACGCCCGCACCCACAGGTTTAGCGCTGGCGATGGAGCCTGCGTAAATCCTCGGGGAGCGGGCGTGCCCGCGAAGGGCCGCAACGCGGCCCTGGGGTAATTTCACttac                              >  2:3543919/1‑147 (MQ=37)

                                                                                                                           ttGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTGGAGCCTGCGTAATTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCAACGCGGCCCTGGGTTTAGTTCTCTTCctgg                           >  2:5019843/1‑149 (MQ=255)

                                                                                                                                   ttttGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGTTTTAGCGCTGGATTTGGAGCCTGCGTAATTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCAACGCGGCCCTGTGTTTATTTCTCTTCCTGGCTGGCAGc                   <  2:2348786/148‑1 (MQ=255)

                                                                                                                                   gTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACACGTTTAGCGCTGGCGTTGGGGCCGGCGGAATTCCTGTGGGAGCGGGCGTGCCCGCGCAGGGCCGCCACGCGGCCCAGGGTTTATTTCGCGTCCTGGCTGGCAGc                   >  2:1847556/1‑149 (MQ=37)

                                                                                                                                    tttGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCCCGCCCACAGGTTTTTCGCTGGCGTTGGAGGCGGCGTAATTGCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCCACGCGGCCCTGGGTTTATTTCTGGTACTGGCGTGCAGcc                  >  1:5237166/1‑149 (MQ=25)

                                                                                                                                    tgtGGGCGGGGCGGCAGCCCTTCGCGGGCACGCCCGCGCCCACCGGTGTAGCGCTGGCTTGGGCGCCTGCTTAATTCCTGTGGGCGCGGGCGTGCCCGCGAAGGGCCGCAACGCGGCCCTGGGTTTATTTCTCTTCCTGGCTGGCAGcc                  <  1:5056047/147‑1 (MQ=255)

                                                                                                                                             cgcgGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTTGCGCTGGCTTTGGAGCCTGCGTAATTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCAACGCGGCCCTGGGTTTATTTCTCTTCCTGGCTGGCAGCCGGCGCCGGt         <  2:242832/149‑1 (MQ=255)

                                                                                                                                               cgGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTGGAGCCTGCGTAATTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCAACGCGGCCCTGGGTTTATTTCTCTTCCTGGCTGGCAGCCGGCGCCGGTgg       <  2:4356660/149‑1 (MQ=255)

                                                                                                                                                 gccgCCCTGCGGGGCCAGGCCCGCCCCCACGTGTTTCGGGGGGGTTTTGGTGCCGGCGTAATTCGGGGGGGCGGGGGGGTGCCCGCGAAGGGCCGCAACGCGGCCCTGGGTTTATTTCTCTTCCTGGCTGGCAGCCGGCGCCGGTggcg     <  1:4519214/146‑1 (MQ=255)

                                                                                                                                                   aGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTCGCGCGGGCTTTGGAGCCGGCGTAAGTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCACCGCGGCCCTGGGTTTATTTCTCTTCCTGGCTGGCAGCCGGCGCCGGTggcggc   <  2:5185907/149‑1 (MQ=38)

                                                                                                                                                    gCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTGGAGCCTGCGTAATTCCGGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCAACGCGGCCCGGGGTTTATTTCTCTTCCTGGCTGGCAGCCGGCGCCGGTGGCGGcc  >  2:4232294/1‑149 (MQ=255)

TACCGTGGCGAACCGGGTTATCTTCATGGACAAGGGCGAGATTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTAGCGCTGGCTTTGGAGCCTGCGTAATTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCAACGCGGCCCTGGGTTTATTTCTCTTCCTGGCTGGCAGCCGGCGCCGGTGGCGGCC  >  NC_002947/1491814‑1492110

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.