Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,471,8330TG26.4% 700.4 / 74.7 400intergenic (‑16/+108)PP_3081/PP_5560hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (64/204);  new base G (82/14);  total (182/218)
Fisher's exact test for biased strand distribution p-value = 1.75e-26
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 409 total aligned reads displayed.

GCGTACCTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTGGCTC  >  NC_002947/3471685‑3471981
                                                                                                                                                    |                                                                                                                                                    
   tACCTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGGCGCCGgcg                                                                                                                                                   >  1:2642721/1‑149 (MQ=255)
       tGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGcggcgg                                                                                                                                               <  2:5241949/149‑1 (MQ=255)
       tGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGcggcgg                                                                                                                                               <  2:3993144/149‑1 (MQ=255)
           ggCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCaa                                                                                                                                           <  1:8199703/149‑1 (MQ=255)
           ggCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGCAGGCGGCCaa                                                                                                                                           <  1:1013084/149‑1 (MQ=255)
               ggTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCAGCGGCGGCCAACGCt                                                                                                                                       >  2:1423969/1‑149 (MQ=255)
                 ttGTCCCTGCTCTGTTGGGGGGTCCGCTCTTCACCGGCACCGCTTGCGGGGTCCTGGCCGACCTGTTGCTGGGAAATGACGCCGCCATCAGTGAAAGACGAGTAACTTACCGACATCGCGCCTGGGCCGCCTGCGGCGGCCAACGCtgt                                                                                                                                     <  1:8153114/149‑1 (MQ=255)
                    tCCCAGCTCTGTTGGGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTTTTGCAGGGAATTGACGCCGCCATCAGTTAAAGACGAGGAACTGACCGACATCGCGCGTTGGCCGCCTGCGGCGGCCAACGCTGTGCa                                                                                                                                  <  1:2749968/149‑1 (MQ=255)
                      ccAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAgg                                                                                                                                >  2:2937556/1‑149 (MQ=255)
                       cAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGGCGCCTGCGGCCGCCAACCCGGTGCAggg                                                                                                                               >  1:2946215/1‑149 (MQ=255)
                        aGCTCTGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTTTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGgc                                                                                                                              <  2:2327311/149‑1 (MQ=255)
                        aGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCATTGACGCCGCCATCAGTGAAAGACGCGGAACTGCCCGACAGCGCGCGTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGgc                                                                                                                              <  2:76559/149‑1 (MQ=255)
                        aGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCAGCGGCGGCCAACCCTGTGCAGGgc                                                                                                                              >  2:3068100/1‑149 (MQ=255)
                        aGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCCCCGGCGGCGGCCCACCCAGTGCAGGgc                                                                                                                              >  1:6185005/1‑149 (MQ=255)
                          ctcttttGGGGGGTCCGCTCTCCACCGGCACGTGATGCCTGTTCGTTGCCGACCTGTTGCTTGGAATTGACGCCGCAATACTTGAATCACTCGGATCTGACCTACATCGCGCGTTGGCCGCCTGCGGGGGCCAACGCTGTGCAGGgcag                                                                                                                            <  2:3746078/144‑1 (MQ=255)
                            cAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGGCGCCGGGGGCGGGCCACCGGGTGCAGGgcagca                                                                                                                          >  1:1228375/1‑149 (MQ=255)
                             aGTTGCGGGGTCCGCTCTTCACCGGCACCGCTTGCCGGGTCCTGGCCGACCTGTTGCAGGGCACTGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCaa                                                                                                                         <  2:4727629/149‑1 (MQ=255)
                              gtgggggggCCCGCTCTCCCCCGGCACCGCAGGCGGGGTCCGGCCCGACGTGTTGCCGGCCAATGCCGCCGCAATCAGTTAAAGACGAGCAACTGACCGACACCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCaaa                                                                                                                        <  1:4242058/144‑1 (MQ=255)
                              gTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCCGCCAACGCGGTGCAGGGCCGCaaa                                                                                                                        >  1:6957325/1‑149 (MQ=255)
                              gTTGCGGGGTCCGCACTTCACCGCCCCCGCATGCCGGGTCCTGGCCTACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCCACATCGCGCCTTGGCCGCCTGCTGCGGCCAACGCTGTGCAGGGCAGCaaa                                                                                                                        <  2:6096349/149‑1 (MQ=255)
                                tGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAagc                                                                                                                      >  2:8985530/1‑149 (MQ=255)
                                 gCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTTTTGCCGGGCAATGACGCCGCCAACAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGGGGCGGCCAACGCTGTGCAGGGCAGCAAagca                                                                                                                     <  1:3520832/149‑1 (MQ=255)
                                     ggTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCCCCAGCGGCGGCCAACCCGGTGCAGGGCACCAAAGCAGCGa                                                                                                                 >  2:6532615/1‑149 (MQ=255)
                                      gTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCAGCGGCGGCCAACGCGGTGCAGGGCAGCAAAGCAGCgca                                                                                                                >  2:4785251/1‑147 (MQ=255)
                                        ccGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGGCGCCGGGGGGGGCCACCCCGGGGGCGGGCCGCAAAGCCGCGaaac                                                                                                              >  1:75983/1‑147 (MQ=255)
                                         cGCTCTTCACCGGCACCTCATGCGGGGTCCTGGCCGACCTGTTGCTGGGAAATGCCGCCGCAATATTTTAAACACGAGGAACTGACCTACATCGCGCCTTGGCCGCCTGCGGGGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAg                                                                                                             <  1:471859/149‑1 (MQ=255)
                                          gCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAAAGCTGTGCAGGGCAGCAAAGCAGCGAACAGc                                                                                                            >  2:1341113/1‑149 (MQ=255)
                                           ctctTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCAGCGGCGGCCCACGCGGTGCAGGGCAGCAAACCAGCGAACAGcc                                                                                                           >  1:7367205/1‑149 (MQ=255)
                                             ctTCACCGGCCCCGCTTGCGGGTTCCTGGCCGACTTTTTGCTGGGAATTGACGCCGCCATCTTTTAAAGACGCGGAACTGACCGAAATCGCGCGTGGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAg                                                                                                         <  1:6127086/149‑1 (MQ=255)
                                               tCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAgtg                                                                                                       >  2:1270619/1‑149 (MQ=255)
                                               tCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAgtg                                                                                                       >  2:2828509/1‑149 (MQ=255)
                                               tCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCAACGCGGTGCAGGGCAGCAAAGCAGCGAACAGCCCgtg                                                                                                       >  2:5768759/1‑149 (MQ=255)
                                                cACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGGCGCCGGCGGCGGCCCACCCGGTGCAGGGCCGCAAAACACCGAACACCCacggt                                                                                                      >  1:5530927/1‑145 (MQ=255)
                                                   cGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCCGTGTcgg                                                                                                   >  2:6915124/1‑147 (MQ=255)
                                                      cACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAATACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAgg                                                                                                <  2:2110227/149‑1 (MQ=255)
                                                           cATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGGCCCCCGCGGCGGCCCACCCGGTGCAGGGCAGCAAAGCACCGCACACCCACGGTCTGAGGTGCag                                                                                           >  1:7120485/1‑148 (MQ=255)
                                                           cATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCCAACAGCCCGTGTAAGAGGTGCAt                                                                                           >  2:8634815/1‑149 (MQ=255)
                                                             tGCCGGGTCCGGGCCGACCTGGTGCCGGGCAATGACGCCGCCACCCGTGAAAGACGCGGACCTGACCGCCATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAACGCAGCGAACAGCCAGTGTCTGAGGTGCATgg                                                                                         <  2:2031599/149‑1 (MQ=255)
                                                                cGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGGCGCCGGCGGCGGCCCACCCGGTGCAGGGCCGCCAACCACCGCACAGCCAGGGGCTGTGGTGGATGGTCa                                                                                      >  1:4194522/1‑149 (MQ=255)
                                                                cGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCa                                                                                      <  2:5630458/149‑1 (MQ=255)
                                                                cGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACCCTGTGCAGGGCAGCAAAGCAGCGAACAGCCACTGTCTGAGGTGCATGGTCa                                                                                      >  2:2679474/1‑149 (MQ=255)
                                                                cGGGTCCTGGCAGACCTTTTGCAGGGCAATGACGCCGCCATCAGTGAAAGAAGAGGAACTTACCGACATCGATCCTTGGACGCCTGCGGCGGCCAAAGCAGTGAAAGGCAGCAAACCAGCGAAAAGAAAGTGTCTGAGGTGCaagctaa                                                                                      >  2:5925338/1‑143 (MQ=255)
                                                                 gggTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGGCCCCGGCGGCGGCCAACGCGGGGCCGGGCCGCAAAGAAGCGAAAACCCCGTGTGTGTGGTGGATGGTCaa                                                                                     >  1:589634/1‑149 (MQ=255)
                                                                 gggTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCCGCGGCCAACGCTGTGCAGGGCCGCAAACCAGCGAACACCCCCTGTCAGAGGTGCCTGGTCaa                                                                                     >  2:5352105/1‑149 (MQ=255)
                                                                  ggTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGGCGCCGGCGGCGGCCCACCCGGTGCCGGGGCGCAAACCACCCAACACCCACGGTCTGAGGTGCATGGtacat                                                                                    >  1:4962213/1‑145 (MQ=255)
                                                                  ggTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCCGTGTCTGTGGGGCAGGGTCAAt                                                                                    >  2:7205876/1‑149 (MQ=255)
                                                                     cggggCCGCCCTGTTGCTGGGCAATGCCGCCCCCATCTGTTAAAGACGAGTAACTGACCGACATCGCGCCTGGGCCGCCTGGGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCt                                                                                 <  1:3749824/146‑1 (MQ=255)
                                                                     ccTGGGCTACTTTTTGCGTGGCATTGCCGCCGCCTTCAGTTAAAGCGGTGGAACTGACCGAAAGCGGGCCTGGGCCGCCGGCGGGGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCt                                                                                 <  1:8315401/149‑1 (MQ=255)
                                                                     ccTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCt                                                                                 <  2:4296225/149‑1 (MQ=255)
                                                                       tGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTTAACGACGAGGAACTGACCGACATCGCGCCTGGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTg                                                                               <  1:2431142/149‑1 (MQ=255)
                                                                        ggCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGCGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTgg                                                                              <  1:568316/149‑1 (MQ=255)
                                                                          ccGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCa                                                                            <  2:4970219/149‑1 (MQ=255)
                                                                          ccGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCa                                                                            <  2:6769723/149‑1 (MQ=255)
                                                                          ccGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCAGCCGCCGCCAACCCTGTGCACGGCAGCAAAGCAGCGAAAAGCCCGTGTGTGAGGTGGATGGTCAAAACTTGGcc                                                                            >  2:7061079/1‑148 (MQ=255)
                                                                            gACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGGGTCTGAGGTGCATGGTCAATCCTTGGCAgg                                                                          >  2:5147413/1‑149 (MQ=255)
                                                                             aCCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGCGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAggg                                                                         <  2:8753929/149‑1 (MQ=255)
                                                                                 gTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTc                                                                     <  2:740381/149‑1 (MQ=255)
                                                                                   tGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCAc                                                                   <  1:747334/149‑1 (MQ=255)
                                                                                        ggCAATGCCGCCGCCATCAGTGAAAGACGCGGAACTGACCGCCCTCGCGCCTGGGCCGCCGGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTc                                                              <  2:7843908/149‑1 (MQ=255)
                                                                                         gCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCCCCGGCGGCGGCCCACCCGGTGGAGGGCCGCAAAACAGCCAACACCCACGGTCTGTGGTGGCAGGTGAAAACGTGGCAGGGCGTCACCGCGCa                                                             >  1:8680814/1‑149 (MQ=255)
                                                                                          cAATGACGCCGCCATCTGTCAAAGCCGCGGACCTGACCGACATCGCGCCTGGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAg                                                            <  1:3201888/149‑1 (MQ=255)
                                                                                          cAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCAACCCGGTGCCCGGCCGCAAAACAGCGAACAGCCAGTGTCTGTGGTGGCTGGTCAAACCTTTGCAGGGCGTCACGGCTCAg                                                            >  1:5827582/1‑149 (MQ=255)
                                                                                                cgccgcCATCAGTGAACGCCGCGCAACTCACCGCCAGCGCGCCTGGCCCGCCTGCGGCGCCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGc                                                      <  1:842632/149‑1 (MQ=255)
                                                                                                cgccgcCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGc                                                      <  2:1689182/149‑1 (MQ=255)
                                                                                                cgccgcCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGc                                                      <  2:8885794/149‑1 (MQ=255)
                                                                                                cgccgcCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACCCTGTGCAGGGCAGCAAAGCAGCGCACACCCAGTGGCTGAGGTGCATGGTCAATACATGGCAGGGCGTCACGGCTCAGTCTAGc                                                      >  2:6149934/1‑149 (MQ=255)
                                                                                                  ccgccATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGGCGCCGGCGGCGGCCAACGCGGTGCGGGGCCGCAAACCAGCGAACAACCCCGGTCTGTGGTTGATGGTCAAAACGTTGCAGGGCGGCCCCGGGCAGTCTATccc                                                    >  1:4352541/1‑149 (MQ=255)
                                                                                                    gccATCTGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAg                                                  <  1:6635287/149‑1 (MQ=255)
                                                                                                    gccATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCCACCCTGTGCCGGGCACCCAAGCACCGAACACCCACTGTCTTGGGTGGCTGGTGAAAACATGGCAGGGCGGAACGGCGCAGTCAATCCCAg                                                  >  2:3846536/1‑149 (MQ=255)
                                                                                                    gccATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCAACGCGGTGCCGGGCAGCAAAGCAGCGAACACCCACTGTCAGAGGTGCATGGTCAAACCATGGCCCGGCGTCACCGCGCAGTCTAACCCAg                                                  >  2:7746888/1‑149 (MQ=255)
                                                                                                     caaTCAGTGAAAGACGCGGAACTGCCCGACAGCGCGCCTGGGCCGCGGGGGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAgg                                                 <  1:3890/147‑1 (MQ=255)
                                                                                                      cATCAGTGAAAGACGAGGAACTGACCGACAGCGCGCCATGGCCGCCGGCCGCGGCCAACGCCAGGCACGGCACCAAAGCACCGAACAGCAACGCACTGAGGTGCATGGGCCAACCGTGGCCGGGCGTCACGGCTCAGGCAAGcccgcgg                                                >  2:2869066/1‑145 (MQ=255)
                                                                                                        tCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCt                                              <  1:9014881/149‑1 (MQ=255)
                                                                                                             gAAAGACGAGGAACTGACCGACATCGCGCCTTGGGCGCCGGCGGCGGCCAACCCGGTGGAGGGCAGCAAACCACCGAAAACCCAGGGTGGGAGGTGCAAGGTCAAACCATGGCAGGGCGGCACCGCGCAGTCAAGCCCCGGTATGCtta                                         >  2:1097057/1‑148 (MQ=255)
                                                                                                             caaaGACGAGCAACTGACCGACATCGCGCCTGGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTc                                         <  1:4130387/148‑1 (MQ=255)
                                                                                                              aaaGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCCGCGGCGGCCCACCCGGTGCCGGGCAGCAAAGCACCCAACAGCCAGTGTCTGAGGGGCCAGGTCAAACCGTGGCCGGGCGTCACGGCGCCGTCTAGCCCACGTCTGCTTCa                                        >  2:6262655/1‑149 (MQ=255)
                                                                                                               aaGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAg                                       <  2:8354743/149‑1 (MQ=255)
                                                                                                               aaGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAg                                       <  1:6715075/149‑1 (MQ=255)
                                                                                                               aaGACGAGGAACTGACCGACATCGCGCCTTGGCCCCCGGCGGCGGCCAACCCGGTGCAGGGCAGCAAAGCAGCGAACACCCAGTGTGTGAGGTGGATGGTCAATACTTGGCAGGGCGTCAAGGCTCAGTCTAGCCCAGGTCTGcgtaag                                       >  2:4622037/1‑144 (MQ=255)
                                                                                                                  aCGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCgg                                    <  2:3598103/149‑1 (MQ=255)
                                                                                                                   cGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGc                                   <  1:1400979/149‑1 (MQ=255)
                                                                                                                           tGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTgg                           <  1:5280439/149‑1 (MQ=255)
                                                                                                                           tGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTgg                           <  1:6434169/149‑1 (MQ=255)
                                                                                                                             aCCGACATCGCGCCTTGGGCGCCGGCGGCGGCCAACCCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTGTGAGGGGCATGGTGAAACCGTGGCCGGGCGGCAACGCGCAGTCTAGCCCACGTCTGCTTCAGCGGCGGTCCAGGTc                         >  2:4215938/1‑149 (MQ=255)
                                                                                                                                gACATCGCGCCTTGGCCGCCGGCGGCGGGCAACGCGGTGGAGGGCCGCAAAGCAGCCAACAGCCACGGGGTGAGGTGCCTGGTCAAAACGTTGCAGGGCGTCACCGCGCAGTCTAACCCCCGTCAGCGTCAGCGGCAGTCCGGGTCCTc                      >  2:3307463/1‑149 (MQ=255)
                                                                                                                                       cgcCTTGGCCGCCGGCGGCGGCCAACCCTGTGCAGGGCACCAAACCAGCGAACAGCCCGTGTCTGGGGTGCCTGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCGGGTCCTCGGCAGTg               >  2:7423068/1‑149 (MQ=255)
                                                                                                                                        gcCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGc              <  1:5076403/149‑1 (MQ=255)
                                                                                                                                        gcCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGc              <  1:1873496/149‑1 (MQ=255)
                                                                                                                                          gttGGCCGCCGCAGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCt            >  2:8081187/2‑149 (MQ=255)
                                                                                                                                            tGGCCGCCGCAGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTcc          >  1:2818992/1‑149 (MQ=255)
                                                                                                                                             ggCCGCCTGCGGGGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCg         <  2:6402677/149‑1 (MQ=255)
                                                                                                                                             ggCCGCCTGCGGCGGCCAACGCTGTGCAGGACAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCg         <  2:1568142/149‑1 (MQ=255)
                                                                                                                                              gccgccTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGc        <  1:2074593/149‑1 (MQ=255)
                                                                                                                                                cgccTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTg      >  1:287291/1‑149 (MQ=255)
                                                                                                                                                 gccTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTgg     >  1:3415226/1‑149 (MQ=255)
                                                                                                                                                 gccTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTgg     >  2:2523372/1‑149 (MQ=255)
                                                                                                                                                 gccTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTgg     >  1:7324825/1‑149 (MQ=255)
                                                                                                                                                  ccTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTGGc    >  1:7728963/1‑149 (MQ=255)
                                                                                                                                                  ccTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTGGc    >  2:5498480/1‑149 (MQ=255)
                                                                                                                                                    tGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCACTCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTGGCTc  >  2:2614753/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
GCGTACCTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTGGCTC  >  NC_002947/3471685‑3471981

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑