Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,882,3180GC28.2% 621.5 / 121.4 298intergenic (‑372/‑28)pucM/puuE5‑hydroxyisourate hydrolase/allantoinase
Reads supporting (aligned to +/- strand):  ref base G (32/182);  new base C (84/0);  total (116/182)
Fisher's exact test for biased strand distribution p-value = 0.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 300 total aligned reads displayed.

GCAGGTTTCTTGCACTGTATTTCCAGGTCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGTCCTCAATTACGAGGAAGGTGGCGAAC  >  NC_002947/4882171‑4882466
                                                                                                                                                   |                                                                                                                                                    
 caggTTTCTTGCACTGTATTTCCAGGTCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGGCCGCCCCCCCCCCCCa                                                                                                                                                    >  1:2021086/1‑149 (MQ=255)
     tttCTTGCACTGTATTTCCAGGTCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTaa                                                                                                                                                <  1:4348397/149‑1 (MQ=255)
      ttCTTGCACTGTATTTCCAGGTCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAAc                                                                                                                                               <  2:1546077/149‑1 (MQ=255)
      ttCTTGCACTGTATTTCCAGGTCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAAc                                                                                                                                               <  2:6088862/149‑1 (MQ=255)
      ttCTTGCACTGTATTTCCAGGTCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAAc                                                                                                                                               <  2:13835/149‑1 (MQ=255)
         ttGCACTGTATTTCCAGGTCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGca                                                                                                                                            <  2:4715674/149‑1 (MQ=255)
          tGCACTGTATTTCCAGGTCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCCCCCCCCCCACaaaaccac                                                                                                                                           >  1:643531/1‑144 (MQ=255)
            cACTGTATTTCCAGGTCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACaa                                                                                                                                         <  2:8861562/149‑1 (MQ=255)
                gTATTTCCAGGTCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCCCCCCCACGCACcacaag                                                                                                                                     >  2:8181454/1‑149 (MQ=255)
                    ttCCAGGTCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAgaaggaag                                                                                                                                 <  1:6374650/149‑1 (MQ=255)
                       cAGGTCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACt                                                                                                                              <  2:257980/149‑1 (MQ=255)
                        aGGTCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCCCCCCCCCCACGAACGCACAACGAGGAAGAcgg                                                                                                                             >  1:8094375/1‑147 (MQ=255)
                         ggTCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGc                                                                                                                            <  1:828009/149‑1 (MQ=255)
                              cTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGATGTATACAATCAGCCCAACCGGTGGTGCGACATACCGACGCGGCCCCCGCCCCCCCCGCACGAACCCCCAAGAAGGAAGACTGCCGTgg                                                                                                                       >  2:7304713/1‑148 (MQ=255)
                                  gAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAgcgc                                                                                                                   <  2:7544207/149‑1 (MQ=255)
                                   aGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCt                                                                                                                  <  2:1710526/149‑1 (MQ=255)
                                    ggCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGGGCGCCCCCCCCCCCCACAAACGCCCCAAAACGAAGACAGCCCTGAgcgcgg                                                                                                                 >  1:421946/1‑147 (MQ=255)
                                    ggCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCCCCCCCCCCACACACCCACAACAAGGAACACATCACAGAgcgcgg                                                                                                                 >  1:6076459/1‑147 (MQ=255)
                                    ggCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTg                                                                                                                 <  1:6505014/149‑1 (MQ=255)
                                    ggCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCCCCCCCCCCCCCCCCCAAACCACAACAACGAAAACAGCAGGGAgcgcgg                                                                                                                 >  1:3450138/1‑147 (MQ=255)
                                     gCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCCCCCCCCCCCCCCCCAAACCCACAAGAAGGAACACATCAGTGTgcccggg                                                                                                                >  2:2793079/1‑144 (MQ=255)
                                      cGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCCCCCCCCCCCCCCCCCAACCCACAACAAGGAACACGGCCGGGAGCCCAGAt                                                                                                               >  2:8575310/1‑149 (MQ=255)
                                        aCAAAAGGGAAGAAATGCGGAAAAACAGGCTAACAAAAGATTTCAGAAGTAGTATACAATCAGCCCATCCGGTGGTGCGACATAACGACGCGGCCCGCCCCCACCCCCCACGAACCCCCAAGAACGCCGACATCAGAGAgcgaagagtg                                                                                                             >  2:5969226/1‑142 (MQ=255)
                                         cAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTAc                                                                                                            <  1:594370/149‑1 (MQ=255)
                                           aaaGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCCCCCCCCGCACGCACCCCCAAGAAGGAAGACTGCAGGGAGCGCAGATTAcac                                                                                                          >  2:6767990/1‑147 (MQ=255)
                                            aaGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCt                                                                                                         <  1:5594131/149‑1 (MQ=255)
                                             aGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGGCCGCCCCCCCCCCGCCCGAACGCCCAAGAAGGAAGACGGCAGTGGGCGCGGAGTAcccgc                                                                                                        >  1:7270930/1‑147 (MQ=255)
                                              gggAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTcg                                                                                                       <  1:4672904/149‑1 (MQ=255)
                                               ggAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCCCCCAAACCCCCAAGAAGGAACACGGCAGGGAGCGCTGAGTAaccgcac                                                                                                      >  2:5398074/1‑145 (MQ=255)
                                                gaagaaATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACAAAAGCACAAGAAGGAAGACTGAACTGAGCGCTGATTACCCAcgcg                                                                                                     >  2:3131805/1‑149 (MQ=255)
                                                 aagaaATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGa                                                                                                    <  2:4919803/149‑1 (MQ=255)
                                                  agaaATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCCCCCCCCCCACAAACGCCCAAGAAGGCACACAGCAGGGAGCGCTGATTAACCGCGCGAc                                                                                                   >  2:2805106/1‑149 (MQ=255)
                                                  agaaATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGAc                                                                                                   <  2:4591396/149‑1 (MQ=255)
                                                    aaaTGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCCCCCCCCCCCCCAACGCCCACGAAGGAAGACACCACTGAGCGCGGCTTACCCGCGCGaacg                                                                                                 >  1:7417074/1‑146 (MQ=255)
                                                      aTGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGGCCGCCCCCCCCCCCCCCGAACGCACAAGAAGGTAAACAGCACTGAGCGCTGGTTAACCACGCGACCGGa                                                                                               >  2:1424589/1‑149 (MQ=255)
                                                      aTGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGa                                                                                               <  1:5748999/149‑1 (MQ=255)
                                                       tGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCCCCCCCCGCCCGACCCCCCCAGAAGCAAGACTGCCGTGAGCGCGGATGACCCACGCGACCAGAt                                                                                              >  2:7688967/1‑149 (MQ=255)
                                                       tGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGAt                                                                                              <  1:8007079/149‑1 (MQ=255)
                                                         cGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCg                                                                                            <  1:6975048/149‑1 (MQ=255)
                                                         cGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCg                                                                                            <  2:3041457/149‑1 (MQ=255)
                                                              aaaCAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTAc                                                                                       <  2:3460524/149‑1 (MQ=255)
                                                              aaaCAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTAc                                                                                       <  2:5582714/149‑1 (MQ=255)
                                                               aaCAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCCCCCCCCCCCCTAACCCACAAAAAGGAAGAATGCAGTTAGCGCGGATTACCCACGCGACCCGATCGGTTACg                                                                                      >  1:1790980/1‑149 (MQ=255)
                                                               aaCAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACg                                                                                      <  2:3831103/149‑1 (MQ=255)
                                                                aCAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACgg                                                                                     <  1:455553/149‑1 (MQ=255)
                                                                aCAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACgg                                                                                     <  1:4126723/149‑1 (MQ=255)
                                                                 cAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCCCACAAAACCACAACAAGGAAGAAAGCAGTGAGCGCTGATTACCCACCCGACCAGATCGGTTACGGc                                                                                    >  2:2684883/1‑149 (MQ=255)
                                                                       tACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGGCCGCCCCCCCCCCCCCCCAAAACACAAAAAAGAAGACTGCAATGAGCGCGGATTAACCAAGCCACCAGCTCGGGTAAGGCaacaac                                                                              >  1:8847622/1‑149 (MQ=255)
                                                                          aaaaGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCCCACAAAACCACAAAAAGGAACAAAGCAATGAGCGCAGAATAAACACCCGACCAAAAACGTTACAGCAACAAacca                                                                           >  1:6997806/1‑148 (MQ=255)
                                                                           aaaGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACcctc                                                                          <  1:938946/149‑1 (MQ=255)
                                                                             aGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGGCCGCCCCCCCCCCCCCCCAACCCACAAAAACGAAGACAGCAAATAGCGCGGAATACCAACGCGACCAGATCGGTTAAGGCAAAAAaccaaca                                                                        >  2:4476540/1‑145 (MQ=255)
                                                                               aTTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCCCCCCCCCCCCAAACCCACAACAAGGAAAAAAGCAGTGAGCGCTGATTAAACACGCGACCAGAAAGGTTAAGGCAACAAACCACcaca                                                                      >  1:3267767/1‑149 (MQ=255)
                                                                                tttCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCAc                                                                     <  1:6888305/149‑1 (MQ=255)
                                                                                tttCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCAc                                                                     <  1:1978369/149‑1 (MQ=255)
                                                                                 ttCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCCCCCCCCCCCCAAACGCCCAAGAAGGAAGACTGCAGTTAGCGCGGAGTAACCGCGCGACCAGAGCCGTTTCGGCAACAACCCACCACAcc                                                                    >  2:3306710/1‑149 (MQ=255)
                                                                                  tCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCCCCCCCCCCACGAACCCACAACAACGAACACAGCCGTGAGCCCTGAGTAACCAAGCGACCGGAACGGGAACGGCCAAAACCCACCACAccc                                                                   >  2:2068639/1‑149 (MQ=255)
                                                                                     gAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGGCCCCCCACCCCCCCCCCAAACCCACAAGAAAGAAGACAGCACGGGGCGCGGATTACCCACGCGACCGGGGAGGTTAAGGCCAAAAACCACCACAcccccc                                                                >  1:2349347/1‑146 (MQ=255)
                                                                                       aGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAAt                                                              <  2:6276558/149‑1 (MQ=255)
                                                                                          tGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGc                                                           <  1:3609437/149‑1 (MQ=255)
                                                                                           gTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGcc                                                          <  1:1327631/149‑1 (MQ=255)
                                                                                            tataCAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCg                                                         <  1:2622594/149‑1 (MQ=255)
                                                                                            tataCAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCg                                                         <  1:4880820/149‑1 (MQ=255)
                                                                                            tataCAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCg                                                         <  2:7175630/149‑1 (MQ=255)
                                                                                            tataCAATCAGCCCATCCGGTGGAGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCg                                                         <  2:5427139/149‑1 (MQ=255)
                                                                                              taCAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCggg                                                       <  2:7020781/149‑1 (MQ=255)
                                                                                               aCAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGc                                                      <  1:1108951/149‑1 (MQ=255)
                                                                                               aCAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCCCCCGAACGCCCAAGAACGAACACTGCAGTGAGCGCGGATTAACCTCGCGACCTGATCGGGTAAGGCAACAACCCACCGCACCCCCACAGGCCGGGc                                                      >  1:2227649/1‑149 (MQ=255)
                                                                                                cAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCCCCCCCCGCCCGAAAGCACCACAAGGAACGCAGCAGTGAGCGCGGCTTACCCCCCCGACCGGGTCGGTTACGGCAACAACCCACCACACCCGCAAAGGCCCGGcc                                                     >  2:356107/1‑148 (MQ=255)
                                                                                                 aaTCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCCCCCCCCCCACACACGCCCCACAAGGAAGGCTGCCGTGGGCGCGGATTACCCGCGCGACCGGCTCGGTTTCGGCAACAACCCGCCGCACCCCCCAGGGCCGGGCac                                                    >  2:1909377/1‑148 (MQ=255)
                                                                                                  aTCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCCCACGAACGCACAACAAGGAAGACTGCAGTGAGCGCTGATTAACCGCGCGACCAGATCCGTTACGGGGACAACCCACCACACCCGCAATGGCCGGGCAAc                                                   >  1:5863810/1‑149 (MQ=255)
                                                                                                          aTCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCAt                                           <  2:6811174/149‑1 (MQ=255)
                                                                                                           tCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACAAACGCACCAGAAGGAAGACTGCAGTGAGCGCTGATAAACCACCCGACCTGATAGGTTACGGCAACAACCCACCACACCCCCAAAAGCCGGGCAACGCCCGCaac                                          >  2:5718410/1‑147 (MQ=255)
                                                                                                               gtggtgCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCgcgc                                      <  1:5655864/149‑1 (MQ=255)
                                                                                                               gtggtgCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCgcgc                                      <  1:7345305/149‑1 (MQ=255)
                                                                                                                tggtgCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCt                                     <  2:2170305/149‑1 (MQ=255)
                                                                                                                   tgCGACATACCGACGCGGCCCCCCCCCCCCCCCCACCAACCCACCACAAGGAACACAGCACGGCGCGCTGATTAACCACCCGACCAGCTCGGTTAAGGCAAAAAACCACCACACCCCCAAAAGCCCGGCACCCCCCGCCACGCGCGGTc                                  >  2:4078745/1‑149 (MQ=255)
                                                                                                                    gCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCt                                 <  1:5478921/149‑1 (MQ=255)
                                                                                                                      gACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCttt                               <  2:108182/149‑1 (MQ=255)
                                                                                                                      gACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCttt                               <  2:7931005/149‑1 (MQ=255)
                                                                                                                         aTACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGt                            <  1:3858428/149‑1 (MQ=255)
                                                                                                                          tACCGACGCGGCCCGCCCACCCCCCCCCCAAACGCACAAGAAGGAATAATGCACTGATCGCAGATTAACCACCCCACCTAAAAGGTTAAGCCAACAAAACACCACACCCCCCAAAGCCCGGCCACCCCCCCAACCCCCAGTCTTTCGTc                           >  2:5284794/1‑149 (MQ=255)
                                                                                                                           aCCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGTcc                          <  1:3104376/149‑1 (MQ=255)
                                                                                                                            ccGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGTCCt                         <  2:6602025/149‑1 (MQ=255)
                                                                                                                              gACGCGGCCCGCCCACCCCCCCCACAAAACCACAACAAGGAAAAAAGCACTGAGCCCTGATTAACCACCCCAACAGATAGGTTAAGGCAACAAAACACCACACCCCCAAAGGCCCCGCAACCCCCCCAAAGCGCGGTCATTAGTACTCa                       >  2:1888406/1‑149 (MQ=255)
                                                                                                                               aCGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGTCCTCaa                      <  1:1014835/149‑1 (MQ=255)
                                                                                                                                    gcccgcccACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGTCCTCAATTACg                 <  2:8386603/149‑1 (MQ=255)
                                                                                                                                     cccgcccACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGTCCTCAATTACGa                <  1:392611/149‑1 (MQ=255)
                                                                                                                                     cccgcccACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGTCCTCAATTACGa                <  1:1447895/149‑1 (MQ=255)
                                                                                                                                     cccgcccACCCCCCCCACAAACCCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCAGATCGGTTACGGCAACAACCCTCCTCACCCGCAAAGGCCGGGCAACCCCCCCAGCGCGCGGTCTTTCGTCCTCAATTACGa                >  2:2474332/1‑149 (MQ=255)
                                                                                                                                      ccgcccACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGTCCTCAATTACGAg               <  2:8732569/149‑1 (MQ=255)
                                                                                                                                         cccACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGTCCTCAATTACGAGGaa            >  1:250267/1‑149 (MQ=255)
                                                                                                                                          ccACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGTCCTCAATTACGAGGAAg           >  1:7708475/1‑149 (MQ=255)
                                                                                                                                            aCCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCTGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGAGCTGTCTTTCTTCCTCAATTACGAGTAAGGt         <  2:4532326/149‑1 (MQ=255)
                                                                                                                                            aCCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGTCCTCAATTACGAGGAAGGt         <  2:7417074/149‑1 (MQ=255)
                                                                                                                                            aCCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGTCCTCAATTACGAGGAAGGt         <  2:6456552/149‑1 (MQ=255)
                                                                                                                                            aCCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGTCCTCAATTACGAGGAAGGt         <  2:2346040/149‑1 (MQ=255)
                                                                                                                                                cccGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGTCCTCAATTACGAGGAAGGTGGCg     >  1:8209243/1‑149 (MQ=255)
                                                                                                                                                  cGCACTAACGCACTAGCAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGTCCTCAATTACGAGGAAGGTGGCGaa   <  2:5911800/149‑1 (MQ=255)
                                                                                                                                                  cGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGTCCTCAATTACGAGGAAGGTGGCGaa   >  1:2931550/1‑149 (MQ=255)
                                                                                                                                                   gCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGTCCTCAATTACGAGGAAGGTGGCGAAc  <  1:3372905/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
GCAGGTTTCTTGCACTGTATTTCCAGGTCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGTCCTCAATTACGAGGAAGGTGGCGAAC  >  NC_002947/4882171‑4882466

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑