BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_002947	539,661	A→G	D679G (GAC→GGC)	rpoB →	DNA‑directed RNA polymerase subunit beta

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	539,661	0	A	G	100.0%	1575.5 / NA	424	D679G (GAC→GGC)	rpoB	DNA‑directed RNA polymerase subunit beta
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (238/186); total (238/186)

Only 100 of 433 total aligned reads displayed.

AAGAAGCAACTGATCGATGAGCTGGTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGACGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGGTGTCTGCGTGGTTGCTCGCCGCGGTGGT  >  NC_002947/539516‑539806

aagaagCAACTGATCGATGAGCTGGTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCacggcga                                                                                                                                                <  1:4873715/149‑1 (MQ=255)

     gCAACTGATCGATGAGCTGGTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCTGTTCCTCGAGCACGGCGACGCCa                                                                                                                                           <  1:4506747/149‑1 (MQ=255)

     gCAACTGATCGATGAGCTGGTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCa                                                                                                                                           <  1:6571717/149‑1 (MQ=255)

     gCAACTGATCGATGAGCTGGTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCa                                                                                                                                           <  1:581344/149‑1 (MQ=255)

      cAACTGATCGATGAGCTGGTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCaa                                                                                                                                          <  1:4120013/149‑1 (MQ=255)

       aaCTGATCGATGAGCTGGTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAAc                                                                                                                                         <  2:4410749/149‑1 (MQ=255)

        aCTGATCGATGAGCTGGTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAAcc                                                                                                                                        >  2:3135375/1‑149 (MQ=255)

          tGATCGATGAGCTGGTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGt                                                                                                                                      >  2:1855561/1‑149 (MQ=255)

             tCGATGAGCTGGTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCg                                                                                                                                   >  2:5690027/1‑149 (MQ=255)

             tCGATGAGCTGGTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCg                                                                                                                                   >  1:3391875/1‑149 (MQ=255)

                aTGAGCTGGTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTg                                                                                                                                >  1:5340952/1‑149 (MQ=255)

                aTGAGCTGGTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTg                                                                                                                                <  1:3268013/149‑1 (MQ=255)

                 tGAGCTGGTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGa                                                                                                                               <  1:682313/149‑1 (MQ=255)

                  gAGCTGGTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGAt                                                                                                                              >  1:2153814/1‑149 (MQ=255)

                   aGCTGGTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATg                                                                                                                             >  1:726744/1‑149 (MQ=255)

                     cTGGTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGGTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTgcgggg                                                                                                                           >  2:6257481/1‑144 (MQ=255)

                       ggTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGtt                                                                                                                         >  2:2442206/1‑149 (MQ=255)

                       ggTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGtt                                                                                                                         <  1:3769688/149‑1 (MQ=255)

                       ggTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGtt                                                                                                                         >  2:6837404/1‑149 (MQ=255)

                         tAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCg                                                                                                                       <  1:2880233/149‑1 (MQ=255)

                         tAGCAGTACGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAACACGTCACCCTGATGGACGTTTAGCCGAAGCAGGTTGTTTCAGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCAAGGCGACGCCAACCGTGCGATGATGGGTTCg                                                                                                                       >  2:7773083/1‑149 (MQ=255)

                           gCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGaa                                                                                                                     <  1:7695437/149‑1 (MQ=255)

                             aGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACa                                                                                                                   >  1:1474887/1‑149 (MQ=255)

                              gTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACAt                                                                                                                  <  2:3868434/149‑1 (MQ=255)

                              gTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACAt                                                                                                                  <  1:607003/149‑1 (MQ=255)

                                    cACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCg                                                                                                            >  2:3309638/1‑149 (MQ=255)

                                    cACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCg                                                                                                            >  1:3067303/1‑149 (MQ=255)

                                      ccTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTc                                                                                                          <  2:7929873/149‑1 (MQ=255)

                                       cTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCa                                                                                                         >  2:4584033/1‑149 (MQ=255)

                                          aaCGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGc                                                                                                      >  1:6875613/1‑149 (MQ=255)

                                          aaCGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGc                                                                                                      >  2:4787129/1‑149 (MQ=255)

                                           aCGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCt                                                                                                     <  2:141122/149‑1 (MQ=255)

                                             gAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGt                                                                                                   >  1:1302203/1‑149 (MQ=255)

                                              aaTTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTa                                                                                                  >  1:641785/1‑149 (MQ=255)

                                               aTTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTAc                                                                                                 >  2:1600247/1‑149 (MQ=255)

                                                ttCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTAcc                                                                                                >  2:8946826/1‑149 (MQ=255)

                                                 tCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCg                                                                                               >  1:5960221/1‑149 (MQ=255)

                                                 tCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCg                                                                                               >  2:646724/1‑149 (MQ=255)

                                                  cACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGa                                                                                              <  1:8941481/149‑1 (MQ=255)

                                                    ccGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGAcc                                                                                            >  1:909294/1‑149 (MQ=255)

                                                     cGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGAccc                                                                                           <  2:6018600/149‑1 (MQ=255)

                                                      gTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCt                                                                                          >  2:1242358/1‑149 (MQ=255)

                                                      gTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCt                                                                                          >  1:5874432/1‑149 (MQ=255)

                                                      gTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCt                                                                                          >  2:8625345/1‑149 (MQ=255)

                                                       tCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTg                                                                                         >  2:3625780/1‑149 (MQ=255)

                                                           ggCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTg                                                                                     <  1:1009164/149‑1 (MQ=255)

                                                           ggCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTg                                                                                     <  2:8054428/149‑1 (MQ=255)

                                                           ggCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTg                                                                                     <  2:178282/149‑1 (MQ=255)

                                                           ggCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTg                                                                                     <  1:3135380/149‑1 (MQ=255)

                                                           ggCGCCGGAAGACGGCACCCTGATGGACGTTTCGCCGTAGCAGGTTGTTTCCGTTGCAGGGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCTTCAGGCTGTACCGACCCTGCTTg                                                                                     <  1:8512549/149‑1 (MQ=255)

                                                             cgcCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGcc                                                                                   >  1:1796920/1‑149 (MQ=255)

                                                                  gAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACaa                                                                              <  2:6641278/149‑1 (MQ=255)

                                                                   aaGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAg                                                                             >  2:8579331/1‑149 (MQ=255)

                                                                         tCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTg                                                                       >  1:7174903/1‑149 (MQ=255)

                                                                         tCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTg                                                                       >  1:2043236/1‑149 (MQ=255)

                                                                         tCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTACCGACAAGCCGCTg                                                                       <  2:3048338/149‑1 (MQ=255)

                                                                            cccTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTggta                                                                    <  1:786015/149‑1 (MQ=255)

                                                                             ccTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCCTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTggtag                                                                   >  1:6328693/1‑149 (MQ=255)

                                                                               tGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTggtagga                                                                 >  2:577731/1‑148 (MQ=255)

                                                                                  tGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTAcc                                                              >  2:7381421/1‑149 (MQ=255)

                                                                                   ggACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCg                                                             >  1:5579282/1‑149 (MQ=255)

                                                                                    gACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCgg                                                            >  1:6131892/1‑149 (MQ=255)

                                                                                      cGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCa                                                          >  2:4265051/1‑149 (MQ=255)

                                                                                      cGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCa                                                          >  2:2989998/1‑149 (MQ=255)

                                                                                       gTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCAt                                                         <  2:5560066/149‑1 (MQ=255)

                                                                                        tttCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATg                                                        >  2:3185265/1‑149 (MQ=255)

                                                                                          tCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGa                                                      <  2:7006085/149‑1 (MQ=255)

                                                                                           cGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAg                                                     >  1:8131745/1‑149 (MQ=255)

                                                                                             ccGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAgcg                                                   >  2:540873/1‑149 (MQ=255)

                                                                                             ccGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAgcg                                                   >  1:1169034/1‑149 (MQ=255)

                                                                                              cGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAgcgc                                                  >  2:8748837/1‑149 (MQ=255)

                                                                                              cGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAgcgc                                                  >  1:7522476/1‑149 (MQ=255)

                                                                                                aaGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCaa                                                >  2:6145074/1‑149 (MQ=255)

                                                                                                aaGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCACTGGTAGGTACCGGCATGGAGCGCaa                                                <  2:4492990/149‑1 (MQ=255)

                                                                                                      gttgttTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGc                                          >  1:1881195/1‑149 (MQ=255)

                                                                                                       ttgttTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGcc                                         <  1:4696656/149‑1 (MQ=255)

                                                                                                       ttgttTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGcc                                         >  2:3716270/1‑149 (MQ=255)

                                                                                                         gttTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCg                                       <  2:4098473/149‑1 (MQ=255)

                                                                                                          tttCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGt                                      <  1:3517538/149‑1 (MQ=255)

                                                                                                             ccGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGAc                                   >  2:7440969/1‑149 (MQ=255)

                                                                                                                ttGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTcc                                >  2:4906952/1‑149 (MQ=255)

                                                                                                                 tGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCg                               >  1:4422798/1‑149 (MQ=255)

                                                                                                                 tGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCg                               <  2:8231967/149‑1 (MQ=255)

                                                                                                                 tGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCg                               >  2:2281242/1‑149 (MQ=255)

                                                                                                                 tGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCg                               >  1:2639988/1‑149 (MQ=255)

                                                                                                                  gCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCgg                              <  2:1043647/149‑1 (MQ=255)

                                                                                                                   cAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGgt                             >  2:2540678/1‑149 (MQ=255)

                                                                                                                     gCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGgtgt                           >  1:6689993/1‑149 (MQ=255)

                                                                                                                      cGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGGTGTc                          <  2:527193/149‑1 (MQ=255)

                                                                                                                       gTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGGTGTCt                         >  2:5091281/1‑149 (MQ=255)

                                                                                                                        tCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGGTGTCTg                        <  1:8623204/149‑1 (MQ=255)

                                                                                                                         cGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGGTGTCTGc                       >  1:8313750/1‑149 (MQ=255)

                                                                                                                          gCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGGTGTCTGCg                      <  2:3394438/149‑1 (MQ=255)

                                                                                                                           cTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGGTGTCTGCGt                     >  2:7257118/1‑149 (MQ=255)

                                                                                                                              aTTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGGTGTCTGCGTGGt                  >  2:8844177/1‑149 (MQ=255)

                                                                                                                              aTTCCGGTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGGTGTCTGCGTGGt                  <  1:8825125/149‑1 (MQ=255)

                                                                                                                                         cGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGGTGTCTGCGTGGTTGCTCGCcgcg       >  2:2871067/1‑149 (MQ=255)

                                                                                                                                           aGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGGTGTCTGCGTGGTTGCTCGCCGCggt     >  2:2740403/1‑149 (MQ=255)

                                                                                                                                            gCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGGTGTCTGCGTGGTTGCTCGCCGCggtg    >  2:2079775/1‑149 (MQ=255)

                                                                                                                                             cACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGATGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGGTGTCTGCGTGGTTGCTCGCCGCggtgg   <  2:2153814/149‑1 (MQ=255)

AAGAAGCAACTGATCGATGAGCTGGTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGACGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGGTGTCTGCGTGGTTGCTCGCCGCGGTGGT  >  NC_002947/539516‑539806

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`