Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_002947 539,661 A→G D679G (GAC→GGC)  rpoB → DNA‑directed RNA polymerase subunit beta

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947539,6610AG100.0% 1751.2 / NA 472D679G (GAC→GGC) rpoBDNA‑directed RNA polymerase subunit beta
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (261/211);  total (261/211)

Only 100 of 490 total aligned reads displayed.

CAAGAAGCAACTGATCGATGAGCTGGTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGACGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGGTGTCTGCGTGGTTGCTCGCCGCGGTGGT  >  NC_002947/539515‑539806
                                                                                                                                                  |                                                                                                                                                 
  agaagCAACTGATCGATGAGCTGGTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCacggcgac                                                                                                                                               >  2:9013122/1‑149 (MQ=255)
   gaagCAACTGATCGATGAGCTGGTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCacggcgacg                                                                                                                                              <  1:6194470/149‑1 (MQ=255)
    aagCAACTGATCGATGAGCTGGTAGCAGTTCGACACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGc                                                                                                                                             >  2:10453087/1‑149 (MQ=255)
       cAACTGATCGATGAGCTGGTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCaa                                                                                                                                          <  1:10006897/149‑1 (MQ=255)
       cAACTGATCGATGAGCTGGTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCaa                                                                                                                                          >  2:9195986/1‑149 (MQ=255)
       cAACTGATCGATGAGCTGGTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCaa                                                                                                                                          >  2:5302260/1‑149 (MQ=255)
        aaCTGATCGATGAGCTGGTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAAc                                                                                                                                         <  2:1461220/149‑1 (MQ=255)
        aaCTGATCGATGAGCTGGTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAAc                                                                                                                                         >  1:7293419/1‑149 (MQ=255)
         aCTGATCGATGAGCTGGTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAAcc                                                                                                                                        >  1:6077951/1‑149 (MQ=255)
            gATCGATGAGCTGGTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTg                                                                                                                                     <  2:10170097/149‑1 (MQ=255)
             aTCGATGAGCTGGTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGc                                                                                                                                    >  1:6647352/1‑149 (MQ=255)
              tCGATGAGCTGGTAGCAGATCGTCACATGAACGAATACACCGTCAAGGCGCCGGAAGACGACACCCTGATGGACGTTTCGCCGAAGCAGGTAGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCg                                                                                                                                   >  2:9950758/1‑149 (MQ=255)
                  tGAGCTGGTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGa                                                                                                                               <  2:1068820/149‑1 (MQ=255)
                  tGAGCTGGTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGa                                                                                                                               >  1:451434/1‑149 (MQ=255)
                       tGGTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGt                                                                                                                          >  2:1240803/1‑149 (MQ=255)
                       tGGTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGt                                                                                                                          >  2:8256231/1‑149 (MQ=255)
                       tGGTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGt                                                                                                                          <  1:9386368/149‑1 (MQ=255)
                       tGGTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGt                                                                                                                          <  2:3500848/149‑1 (MQ=255)
                             cAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAAc                                                                                                                    >  1:7879334/1‑149 (MQ=255)
                               gTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACAt                                                                                                                  >  2:8687398/1‑149 (MQ=255)
                                 tCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGc                                                                                                                >  1:4713077/1‑149 (MQ=255)
                                    tCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGc                                                                                                             >  2:6409099/1‑149 (MQ=255)
                                     cACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCg                                                                                                            >  2:1026779/1‑149 (MQ=255)
                                     cACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCg                                                                                                            >  2:2312190/1‑149 (MQ=255)
                                     cACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCg                                                                                                            >  1:4583772/1‑149 (MQ=255)
                                      aCCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGt                                                                                                           <  1:6766198/149‑1 (MQ=255)
                                       ccTGAACAAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTc                                                                                                          <  2:6942174/149‑1 (MQ=255)
                                       ccTGAACAAAGTCACCGTCTAGTCGCTGTAAGAGGTCTCCCGGTTGGTCGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGGGTCGCTGATTCCGTTCCTCGAGCACGGCTACTCCAACCGTGCGTTGATTGGTTCGAACATGCAGCGTc                                                                                                          <  2:10583484/149‑1 (MQ=255)
                                        cTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCa                                                                                                         >  1:3488464/1‑149 (MQ=255)
                                         tGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAg                                                                                                        >  1:1727364/1‑149 (MQ=255)
                                           aaCGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGc                                                                                                      >  2:5492178/1‑149 (MQ=255)
                                             cGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTg                                                                                                    <  1:7427051/149‑1 (MQ=255)
                                               aaTTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTa                                                                                                  >  2:3039457/1‑149 (MQ=255)
                                                  tCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCg                                                                                               <  1:8539220/149‑1 (MQ=255)
                                                  tCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCg                                                                                               <  1:8797693/149‑1 (MQ=255)
                                                   cACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGa                                                                                              >  2:806138/1‑149 (MQ=255)
                                                      cGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGGTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCTTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGAccc                                                                                           <  1:3246384/149‑1 (MQ=255)
                                                       ctCAAGGCCCCGGAAGACGACACCCTCAAGGACGAATCGCCCAAGCAGGATGTTTCCGGTGCAGCGTCGCTGATTCCGTTCCTCGACCACGGCCACGCCAACCCAGCCGTGAAGGGTTCGACCATGCAGCGACACGCTCTCCCGACCCt                                                                                          >  2:280917/2‑149 (MQ=255)
                                                          aaGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGTTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCTAGCACTGCGACGCCAACCGTGCGTTGATGTGTTCGAACATGCAGCGTCCGGCTGTACCGACCCTGCg                                                                                       <  1:1957580/149‑1 (MQ=255)
                                                          aaGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCg                                                                                       <  1:4976760/149‑1 (MQ=255)
                                                            ggCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTg                                                                                     >  1:5554111/1‑149 (MQ=255)
                                                            ggCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTg                                                                                     <  1:1287071/149‑1 (MQ=255)
                                                            ggCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTg                                                                                     <  2:6715445/149‑1 (MQ=255)
                                                             gcgcCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGc                                                                                    >  1:9476580/1‑149 (MQ=255)
                                                              cgcCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGcc                                                                                   <  1:4145325/149‑1 (MQ=255)
                                                                 cGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGAc                                                                                >  2:3674647/1‑149 (MQ=255)
                                                                   gAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACac                                                                              >  2:6077423/1‑148 (MQ=255)
                                                                   gAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACaa                                                                              <  1:5779784/149‑1 (MQ=255)
                                                                    aaGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAg                                                                             <  1:902633/149‑1 (MQ=255)
                                                                       aCGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCg                                                                          <  1:835054/149‑1 (MQ=255)
                                                                         gTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCt                                                                        <  2:7262871/149‑1 (MQ=255)
                                                                         gTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCt                                                                        >  1:302105/1‑149 (MQ=255)
                                                                           cACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTACGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTgg                                                                      >  1:9908580/1‑149 (MQ=255)
                                                                            aCCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTggt                                                                     >  2:2584491/1‑149 (MQ=255)
                                                                               cTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTggtagg                                                                  >  2:4164464/1‑149 (MQ=255)
                                                                                   tGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTAcc                                                              <  1:3144339/149‑1 (MQ=255)
                                                                                   tGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTAcc                                                              <  2:1614006/149‑1 (MQ=255)
                                                                                   tGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTAcc                                                              <  1:6877029/149‑1 (MQ=255)
                                                                                    ggACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCg                                                             >  1:10106792/1‑149 (MQ=255)
                                                                                    ggACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCg                                                             <  1:10639225/149‑1 (MQ=255)
                                                                                     gACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCgg                                                            <  2:5132395/149‑1 (MQ=255)
                                                                                      aCGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGc                                                           >  1:2263258/1‑149 (MQ=255)
                                                                                      aCGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGc                                                           >  2:3952101/1‑149 (MQ=255)
                                                                                            cGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAg                                                     <  1:7101377/149‑1 (MQ=255)
                                                                                              ccGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAgcg                                                   >  2:969405/1‑149 (MQ=255)
                                                                                               cGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAgcgc                                                  >  1:3829473/1‑149 (MQ=255)
                                                                                                 aaGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCaa                                                >  2:1795767/1‑149 (MQ=255)
                                                                                                    cAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGt                                             <  2:7944255/149‑1 (MQ=255)
                                                                                                       gttgttTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGc                                          <  1:161582/149‑1 (MQ=255)
                                                                                                        ttgttTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGcc                                         <  1:121298/149‑1 (MQ=255)
                                                                                                        ttgttTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGcc                                         >  2:5680723/1‑149 (MQ=255)
                                                                                                        ttgttTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGcc                                         <  1:747686/149‑1 (MQ=255)
                                                                                                           tttCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGt                                      >  2:9463004/1‑149 (MQ=255)
                                                                                                           tttCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGt                                      >  1:9594312/1‑149 (MQ=255)
                                                                                                            ttCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTg                                     >  1:7508402/1‑149 (MQ=255)
                                                                                                             tCCGTTGCAGAGTCGCAGATTCCGTTCCTCGAGCAAGGAGACGCCAAACGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGa                                    >  2:4581214/1‑149 (MQ=255)
                                                                                                              ccGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGAc                                   <  1:428913/149‑1 (MQ=255)
                                                                                                               cGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACt                                  <  1:9114145/149‑1 (MQ=255)
                                                                                                                   gCAGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCgg                              <  1:10454148/149‑1 (MQ=255)
                                                                                                                     aGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGgtg                            >  1:64585/1‑149 (MQ=255)
                                                                                                                     aGCGTCGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGgtg                            <  2:4713077/149‑1 (MQ=255)
                                                                                                                          cGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGGTGTCTGc                       <  1:4418098/149‑1 (MQ=255)
                                                                                                                          cGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGGTGTCTGc                       >  1:2417295/1‑149 (MQ=255)
                                                                                                                          cGCTGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGGTGTCTGc                       <  1:9764916/149‑1 (MQ=255)
                                                                                                                             tGATTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGGTGTCTGCGTg                    >  1:9991369/1‑149 (MQ=255)
                                                                                                                               aTTCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGGTGTCTGCGTGGt                  >  2:93823/1‑149 (MQ=255)
                                                                                                                                 tCCGTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGGTGTCTGCGTGGTTg                <  2:4905072/149‑1 (MQ=255)
                                                                                                                                    gTTCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGGTGTCTGCGTGGTTGCTc             >  1:2089921/1‑149 (MQ=255)
                                                                                                                                     ttCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGGTGTCTGCGTGGTTGCTcg            >  1:4622330/1‑149 (MQ=255)
                                                                                                                                      tCCTCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGGTGTCTGCGTGGTTGCTcgc           <  2:7687793/149‑1 (MQ=255)
                                                                                                                                         tCGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGGTGTCTGCGTGGTTGCTcgccgc        <  2:3228523/149‑1 (MQ=255)
                                                                                                                                          cGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACGTGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGGTGTCTGCGTGGTTGCTCGCcgcg       >  2:9550354/1‑149 (MQ=255)
                                                                                                                                          cGAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGGTGTCTGCGTGGTTGCTCGCcgcg       >  2:3732247/1‑149 (MQ=255)
                                                                                                                                           gAGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGGTGTCTGCGTGGTTGCTCGCCGCgg      >  1:1396580/1‑149 (MQ=255)
                                                                                                                                            aGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGGTGTCTGCGTGGTTGCTCGCCGCggt     <  2:7293419/149‑1 (MQ=255)
                                                                                                                                            aGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGGTGTCTGCGTGGTTGCTCGCCGCggt     >  2:7447493/1‑149 (MQ=255)
                                                                                                                                            aGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGGTGTCTGCGTGGTTGCTCGCCGCggt     <  2:1988597/149‑1 (MQ=255)
                                                                                                                                            aGCACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGGTGTCTGCGTGGTTGCTCGCCGCggt     <  1:2687645/149‑1 (MQ=255)
                                                                                                                                              cACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGGTGTCTGCGTGGTTGCTCGCCGCggtgg   <  1:5225790/149‑1 (MQ=255)
                                                                                                                                              cACGGCGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGGTGTCTGCGTGGTTGCTCGCCGCggtgg   >  1:7011394/1‑149 (MQ=255)
                                                                                                                                                  |                                                                                                                                                 
CAAGAAGCAACTGATCGATGAGCTGGTAGCAGTTCGTCACCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTCACCCTGATGGACGTTTCGCCGAAGCAGGTTGTTTCCGTTGCAGCGTCGCTGATTCCGTTCCTCGAGCACGACGACGCCAACCGTGCGTTGATGGGTTCGAACATGCAGCGTCAGGCTGTACCGACCCTGCGTGCCGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTTGCCCGTGACTCCGGTGTCTGCGTGGTTGCTCGCCGCGGTGGT  >  NC_002947/539515‑539806

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑